RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 MAP3K15Q6ZN16 1313 aa20.78■□□□□ 0.92
CTDSP1-209ENST00000488627 ANXA1P04083 346 aa20.77■□□□□ 0.92
CTDSP1-209ENST00000488627 HOXB7P09629 217 aa20.77■□□□□ 0.92
CTDSP1-209ENST00000488627 NECTIN2Q92692 538 aa20.77■□□□□ 0.92
CTDSP1-209ENST00000488627 KIAA1551Q9HCM1 1747 aa20.77■□□□□ 0.92
CTDSP1-209ENST00000488627 SCN7AQ01118 1682 aa20.77■□□□□ 0.91
CTDSP1-209ENST00000488627 DUSP27Q5VZP5 1158 aa20.76■□□□□ 0.91
CTDSP1-209ENST00000488627 CCDC24Q8N4L8 307 aa20.76■□□□□ 0.91
CTDSP1-209ENST00000488627 PIM2Q9P1W9 311 aa20.76■□□□□ 0.91
CTDSP1-209ENST00000488627 BCS1LQ9Y276 419 aa20.76■□□□□ 0.91
CTDSP1-209ENST00000488627 NRXN2Q9P2S2 1712 aa20.75■□□□□ 0.91
CTDSP1-209ENST00000488627 LAMB4A4D0S4 1761 aa20.75■□□□□ 0.91
CTDSP1-209ENST00000488627 FAM9BQ8IZU0 186 aa20.75■□□□□ 0.91
CTDSP1-209ENST00000488627 BRIP1Q9BX63 1249 aa20.75■□□□□ 0.91
CTDSP1-209ENST00000488627 NIP7Q9Y221 180 aaKnown RBP eCLIP20.75■□□□□ 0.91
CTDSP1-209ENST00000488627 KIF6Q6ZMV9 814 aa20.74■□□□□ 0.91
CTDSP1-209ENST00000488627 DDX21Q9NR30 783 aaKnown RBP eCLIP20.74■□□□□ 0.91
CTDSP1-209ENST00000488627 HDGFL1Q5TGJ6 251 aa20.73■□□□□ 0.91
CTDSP1-209ENST00000488627 CNBD1Q8NA66 436 aa20.73■□□□□ 0.91
CTDSP1-209ENST00000488627 C8orf58Q8NAV2 365 aa20.73■□□□□ 0.91
CTDSP1-209ENST00000488627 ZBTB3Q9H5J0 574 aa20.73■□□□□ 0.91
CTDSP1-209ENST00000488627 DALRD3Q5D0E6 543 aaKnown RBP20.72■□□□□ 0.91
CTDSP1-209ENST00000488627 COPS6Q7L5N1 327 aa20.72■□□□□ 0.91
CTDSP1-209ENST00000488627 NBPF5PQ86XG9 351 aaPredicted RBP20.72■□□□□ 0.91
CTDSP1-209ENST00000488627 CHPF2Q9P2E5 772 aa20.72■□□□□ 0.91
CTDSP1-209ENST00000488627 GIGYF2Q6Y7W6 1299 aaKnown RBP20.71■□□□□ 0.91
CTDSP1-209ENST00000488627 C2CD5Q86YS7 1000 aa20.71■□□□□ 0.91
CTDSP1-209ENST00000488627 ZNF34Q8IZ26 560 aa20.71■□□□□ 0.91
CTDSP1-209ENST00000488627 XAGE3Q8WTP9 111 aa20.71■□□□□ 0.91
CTDSP1-209ENST00000488627 BCORQ6W2J9 1755 aa20.71■□□□□ 0.91
CTDSP1-209ENST00000488627 IL16Q14005 1332 aa20.71■□□□□ 0.91
CTDSP1-209ENST00000488627 N4BP2Q86UW6 1770 aaPredicted RBP20.7■□□□□ 0.9
CTDSP1-209ENST00000488627 AFDNP55196 1824 aaKnown RBP20.7■□□□□ 0.9
CTDSP1-209ENST00000488627 H0YIN7 160 aa20.7■□□□□ 0.9
CTDSP1-209ENST00000488627 ELL2O00472 640 aaPredicted RBP20.7■□□□□ 0.9
CTDSP1-209ENST00000488627 PDE6BP35913 854 aa20.7■□□□□ 0.9
CTDSP1-209ENST00000488627 TPTE2Q6XPS3 522 aa20.7■□□□□ 0.9
CTDSP1-209ENST00000488627 TSR2Q969E8 191 aaKnown RBP20.7■□□□□ 0.9
CTDSP1-209ENST00000488627 SALL2Q9Y467 1007 aaPredicted RBP20.7■□□□□ 0.9
CTDSP1-209ENST00000488627 ATP10DQ9P241 1426 aa20.7■□□□□ 0.9
CTDSP1-209ENST00000488627 TSPYL6Q8N831 410 aa20.69■□□□□ 0.9
CTDSP1-209ENST00000488627 DBF4Q9UBU7 674 aaPredicted RBP20.69■□□□□ 0.9
CTDSP1-209ENST00000488627 PDZRN3Q9UPQ7 1066 aa20.69■□□□□ 0.9
CTDSP1-209ENST00000488627 UBN2Q6ZU65 1347 aa20.69■□□□□ 0.9
CTDSP1-209ENST00000488627 KLRG2A4D1S0 409 aaPredicted RBP20.68■□□□□ 0.9
CTDSP1-209ENST00000488627 ST5P78524 1137 aa20.68■□□□□ 0.9
CTDSP1-209ENST00000488627 AIMP1Q12904 312 aaKnown RBP20.68■□□□□ 0.9
CTDSP1-209ENST00000488627 WDR63Q8IWG1 891 aa20.68■□□□□ 0.9
CTDSP1-209ENST00000488627 ZNF784Q8NCA9 323 aaPredicted RBP20.68■□□□□ 0.9
CTDSP1-209ENST00000488627 FAM177BA6PVY3 158 aa20.67■□□□□ 0.9
CTDSP1-209ENST00000488627 GPTP24298 496 aa20.67■□□□□ 0.9
CTDSP1-209ENST00000488627 SUSD4Q5VX71 490 aa20.67■□□□□ 0.9
CTDSP1-209ENST00000488627 TTLL6Q8N841 843 aa20.67■□□□□ 0.9
CTDSP1-209ENST00000488627 NPHP1O15259 732 aa20.66■□□□□ 0.9
CTDSP1-209ENST00000488627 SRGNP10124 158 aa20.66■□□□□ 0.9
CTDSP1-209ENST00000488627 ARHGAP27Q6ZUM4 889 aa20.66■□□□□ 0.9
CTDSP1-209ENST00000488627 HYPKQ9NX55 129 aa20.66■□□□□ 0.9
CTDSP1-209ENST00000488627 SPINK5Q9NQ38 1064 aaPredicted RBP20.65■□□□□ 0.9
CTDSP1-209ENST00000488627 CCER2I3L3R5 266 aa20.64■□□□□ 0.89
CTDSP1-209ENST00000488627 NUTM1Q86Y26 1132 aa20.64■□□□□ 0.89
CTDSP1-209ENST00000488627 ZNF622Q969S3 477 aaKnown RBP eCLIP20.64■□□□□ 0.89
CTDSP1-209ENST00000488627 NYXQ9GZU5 481 aa20.64■□□□□ 0.89
CTDSP1-209ENST00000488627 IBTKQ9P2D0 1353 aaPredicted RBP20.63■□□□□ 0.89
CTDSP1-209ENST00000488627 BRCA1P38398 1863 aaKnown RBP20.63■□□□□ 0.89
CTDSP1-209ENST00000488627 NTSR2O95665 410 aa20.63■□□□□ 0.89
CTDSP1-209ENST00000488627 TCIRG1Q13488 830 aa20.63■□□□□ 0.89
CTDSP1-209ENST00000488627 ERFEQ4G0M1 354 aa20.63■□□□□ 0.89
CTDSP1-209ENST00000488627 PARP10Q53GL7 1025 aa20.63■□□□□ 0.89
CTDSP1-209ENST00000488627 STYK1Q6J9G0 422 aa20.63■□□□□ 0.89
CTDSP1-209ENST00000488627 ANKRD13DQ6ZTN6 518 aa20.63■□□□□ 0.89
CTDSP1-209ENST00000488627 PLBD2Q8NHP8 589 aa20.63■□□□□ 0.89
CTDSP1-209ENST00000488627 ABCC12Q96J65 1359 aa20.62■□□□□ 0.89
CTDSP1-209ENST00000488627 ZNF521Q96K83 1311 aa20.62■□□□□ 0.89
CTDSP1-209ENST00000488627 FANCIQ9NVI1 1328 aa20.62■□□□□ 0.89
CTDSP1-209ENST00000488627 MASTLQ96GX5 879 aa20.62■□□□□ 0.89
CTDSP1-209ENST00000488627 PHAXQ9H814 394 aaKnown RBP20.62■□□□□ 0.89
CTDSP1-209ENST00000488627 ADCY9O60503 1353 aa20.61■□□□□ 0.89
CTDSP1-209ENST00000488627 ANKRD31Q8N7Z5 1873 aa20.61■□□□□ 0.89
CTDSP1-209ENST00000488627 GTF2E1P29083 439 aaPredicted RBP20.61■□□□□ 0.89
CTDSP1-209ENST00000488627 HSP90AB3PQ58FF7 597 aa20.61■□□□□ 0.89
CTDSP1-209ENST00000488627 CCDC30Q5VVM6 783 aa20.61■□□□□ 0.89
CTDSP1-209ENST00000488627 NLRP10Q86W26 655 aa20.61■□□□□ 0.89
CTDSP1-209ENST00000488627 CHD4Q14839 1912 aa20.61■□□□□ 0.89
CTDSP1-209ENST00000488627 TWISTNBQ3B726 338 aaPredicted RBP20.6■□□□□ 0.89
CTDSP1-209ENST00000488627 CRY2Q49AN0 593 aa20.6■□□□□ 0.89
CTDSP1-209ENST00000488627 CNKSR1Q969H4 720 aa20.6■□□□□ 0.89
CTDSP1-209ENST00000488627 NPR1P16066 1061 aa20.59■□□□□ 0.89
CTDSP1-209ENST00000488627 SLC10A5Q5PT55 438 aa20.59■□□□□ 0.89
CTDSP1-209ENST00000488627 PPP1R42Q7Z4L9 355 aa20.59■□□□□ 0.89
CTDSP1-209ENST00000488627 ISCA1Q9BUE6 129 aa20.59■□□□□ 0.89
CTDSP1-209ENST00000488627 UTP14AQ9BVJ6 771 aaKnown RBP20.59■□□□□ 0.89
CTDSP1-209ENST00000488627 CHMP4AQ9BY43 222 aa20.59■□□□□ 0.89
CTDSP1-209ENST00000488627 C7orf43Q8WVR3 580 aa20.58■□□□□ 0.89
CTDSP1-209ENST00000488627 C21orf2O43822 256 aa20.57■□□□□ 0.88
CTDSP1-209ENST00000488627 VAMP4O75379 141 aa20.57■□□□□ 0.88
CTDSP1-209ENST00000488627 PRELPP51888 382 aa20.57■□□□□ 0.88
CTDSP1-209ENST00000488627 PRPF40BQ6NWY9 871 aaKnown RBP20.57■□□□□ 0.88
CTDSP1-209ENST00000488627 C3orf67Q6ZVT6 689 aa20.57■□□□□ 0.88
CTDSP1-209ENST00000488627 SYNE4Q8N205 404 aa20.57■□□□□ 0.88
CTDSP1-209ENST00000488627 NUP98P52948 1817 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms