RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 PSDA5PKW4 1024 aaPredicted RBP3.83□□□□□ -1.8
DEPDC1-203ENST00000488146 ANKRD24Q8TF21 1146 aa3.83□□□□□ -1.8
DEPDC1-203ENST00000488146 FHDC1Q9C0D6 1143 aaPredicted RBP3.83□□□□□ -1.8
DEPDC1-203ENST00000488146 RSPH6AQ9H0K4 717 aa3.83□□□□□ -1.8
DEPDC1-203ENST00000488146 LAMB4A4D0S4 1761 aa3.83□□□□□ -1.8
DEPDC1-203ENST00000488146 N4BP2Q86UW6 1770 aaPredicted RBP3.83□□□□□ -1.8
DEPDC1-203ENST00000488146 DDX60Q8IY21 1712 aaKnown RBP3.83□□□□□ -1.8
DEPDC1-203ENST00000488146 SRPK2P78362 688 aaKnown RBP3.83□□□□□ -1.8
DEPDC1-203ENST00000488146 RGL3Q3MIN7 710 aa3.83□□□□□ -1.8
DEPDC1-203ENST00000488146 SOGA3Q5TF21 947 aa3.83□□□□□ -1.8
DEPDC1-203ENST00000488146 PHOX2BQ99453 314 aa3.83□□□□□ -1.8
DEPDC1-203ENST00000488146 VPS33BQ9H267 617 aa3.83□□□□□ -1.8
DEPDC1-203ENST00000488146 PRDM10Q9NQV6 1147 aa3.83□□□□□ -1.8
DEPDC1-203ENST00000488146 CAPN2P17655 700 aa3.82□□□□□ -1.8
DEPDC1-203ENST00000488146 HOXC9P31274 260 aa3.82□□□□□ -1.8
DEPDC1-203ENST00000488146 ZCRB1Q8TBF4 217 aaKnown RBP3.82□□□□□ -1.8
DEPDC1-203ENST00000488146 SBF1O95248 1867 aa3.82□□□□□ -1.8
DEPDC1-203ENST00000488146 GNPATO15228 680 aa3.82□□□□□ -1.8
DEPDC1-203ENST00000488146 TOMM70O94826 608 aa3.82□□□□□ -1.8
DEPDC1-203ENST00000488146 TATP17735 454 aaPredicted RBP3.82□□□□□ -1.8
DEPDC1-203ENST00000488146 MAP2K5Q13163 448 aa3.82□□□□□ -1.8
DEPDC1-203ENST00000488146 AMOTQ4VCS5 1084 aa3.82□□□□□ -1.8
DEPDC1-203ENST00000488146 GIGYF2Q6Y7W6 1299 aaKnown RBP3.82□□□□□ -1.8
DEPDC1-203ENST00000488146 NLGN1Q8N2Q7 840 aa3.82□□□□□ -1.8
DEPDC1-203ENST00000488146 STRN4Q9NRL3 753 aa3.82□□□□□ -1.8
DEPDC1-203ENST00000488146 CABP1Q9NZU7 370 aa3.82□□□□□ -1.8
DEPDC1-203ENST00000488146 SPG7Q9UQ90 795 aa3.82□□□□□ -1.8
DEPDC1-203ENST00000488146 RGPD2P0DJD1 1756 aa3.82□□□□□ -1.8
DEPDC1-203ENST00000488146 KAT6BQ8WYB5 2073 aa3.82□□□□□ -1.8
DEPDC1-203ENST00000488146 KDM2BQ8NHM5 1336 aa3.82□□□□□ -1.8
DEPDC1-203ENST00000488146 FER1L6Q2WGJ9 1857 aa3.81□□□□□ -1.8
DEPDC1-203ENST00000488146 PALLDQ8WX93 1383 aa3.81□□□□□ -1.8
DEPDC1-203ENST00000488146 A0A0G2JS52 829 aa3.81□□□□□ -1.8
DEPDC1-203ENST00000488146 PRELPP51888 382 aa3.81□□□□□ -1.8
DEPDC1-203ENST00000488146 MYT1Q01538 1121 aa3.81□□□□□ -1.8
DEPDC1-203ENST00000488146 ZNF827Q17R98 1081 aa3.81□□□□□ -1.8
DEPDC1-203ENST00000488146 DCAF5Q96JK2 942 aa3.81□□□□□ -1.8
DEPDC1-203ENST00000488146 ZSWIM6Q9HCJ5 1215 aa3.81□□□□□ -1.8
DEPDC1-203ENST00000488146 CCDC87Q9NVE4 849 aa3.81□□□□□ -1.8
DEPDC1-203ENST00000488146 ZC3H6P61129 1189 aaKnown RBP3.81□□□□□ -1.8
DEPDC1-203ENST00000488146 CHRNA2Q15822 529 aa3.81□□□□□ -1.8
DEPDC1-203ENST00000488146 TSR1Q2NL82 804 aaKnown RBP3.81□□□□□ -1.8
DEPDC1-203ENST00000488146 POM121Q96HA1 1249 aa3.81□□□□□ -1.8
DEPDC1-203ENST00000488146 COG3Q96JB2 828 aa3.81□□□□□ -1.8
DEPDC1-203ENST00000488146 A0A087WZG4 1122 aa3.8□□□□□ -1.8
DEPDC1-203ENST00000488146 SLC34A2O95436 690 aa3.8□□□□□ -1.8
DEPDC1-203ENST00000488146 MMP14P50281 582 aa3.8□□□□□ -1.8
DEPDC1-203ENST00000488146 VARS2Q5ST30 1063 aaKnown RBP3.8□□□□□ -1.8
DEPDC1-203ENST00000488146 NECTIN2Q92692 538 aa3.8□□□□□ -1.8
DEPDC1-203ENST00000488146 RNF123Q5XPI4 1314 aa3.8□□□□□ -1.8
DEPDC1-203ENST00000488146 IGSF1Q8N6C5 1336 aa3.8□□□□□ -1.8
DEPDC1-203ENST00000488146 SENP3-EIF4A1A0A087X0R7 540 aa3.8□□□□□ -1.8
DEPDC1-203ENST00000488146 KIF3CO14782 793 aa3.8□□□□□ -1.8
DEPDC1-203ENST00000488146 MDM2Q00987 491 aaPredicted RBP3.8□□□□□ -1.8
DEPDC1-203ENST00000488146 CCDC82Q8N4S0 544 aa3.8□□□□□ -1.8
DEPDC1-203ENST00000488146 HHIPL1Q96JK4 782 aa3.8□□□□□ -1.8
DEPDC1-203ENST00000488146 TESK2Q96S53 571 aa3.8□□□□□ -1.8
DEPDC1-203ENST00000488146 POLR3EQ9NVU0 708 aa3.8□□□□□ -1.8
DEPDC1-203ENST00000488146 AXIN2Q9Y2T1 843 aa3.8□□□□□ -1.8
DEPDC1-203ENST00000488146 KCPQ6ZWJ8 1503 aa3.8□□□□□ -1.8
DEPDC1-203ENST00000488146 CDHR2Q9BYE9 1310 aa3.8□□□□□ -1.8
DEPDC1-203ENST00000488146 SPDYE16A6NNV3 312 aaPredicted RBP3.79□□□□□ -1.8
DEPDC1-203ENST00000488146 PROCA1Q8NCQ7 364 aaPredicted RBP3.79□□□□□ -1.8
DEPDC1-203ENST00000488146 SMC1BQ8NDV3 1235 aa3.79□□□□□ -1.8
DEPDC1-203ENST00000488146 KLRG1Q96E93 195 aa3.79□□□□□ -1.8
DEPDC1-203ENST00000488146 CCNL1Q9UK58 526 aaPredicted RBP3.79□□□□□ -1.8
DEPDC1-203ENST00000488146 LRRC37AA6NMS7 1700 aa3.79□□□□□ -1.8
DEPDC1-203ENST00000488146 RPS6KA4O75676 772 aa3.79□□□□□ -1.8
DEPDC1-203ENST00000488146 CSB-PGBD3P0DP91 1061 aa3.79□□□□□ -1.8
DEPDC1-203ENST00000488146 RGS19P49795 217 aa3.79□□□□□ -1.8
DEPDC1-203ENST00000488146 TMF1P82094 1093 aa3.79□□□□□ -1.8
DEPDC1-203ENST00000488146 PTGDRQ13258 359 aa3.79□□□□□ -1.8
DEPDC1-203ENST00000488146 DNAJC5GQ8N7S2 189 aa3.79□□□□□ -1.8
DEPDC1-203ENST00000488146 RAPGEF4Q8WZA2 1011 aa3.79□□□□□ -1.8
DEPDC1-203ENST00000488146 LRRC4BQ9NT99 713 aa3.79□□□□□ -1.8
DEPDC1-203ENST00000488146 AFDNP55196 1824 aaKnown RBP3.79□□□□□ -1.8
DEPDC1-203ENST00000488146 EVI5O60447 810 aa3.78□□□□□ -1.8
DEPDC1-203ENST00000488146 GPR162Q16538 588 aa3.78□□□□□ -1.8
DEPDC1-203ENST00000488146 AMHR2Q16671 573 aa3.78□□□□□ -1.8
DEPDC1-203ENST00000488146 GPR153Q6NV75 609 aa3.78□□□□□ -1.8
DEPDC1-203ENST00000488146 TEX13AQ9BXU3 409 aaPredicted RBP3.78□□□□□ -1.8
DEPDC1-203ENST00000488146 CEMIPQ8WUJ3 1361 aa3.78□□□□□ -1.8
DEPDC1-203ENST00000488146 RBBP6Q7Z6E9 1792 aaKnown RBP3.78□□□□□ -1.8
DEPDC1-203ENST00000488146 LAMB2P55268 1798 aa3.78□□□□□ -1.8
DEPDC1-203ENST00000488146 CA12O43570 354 aa3.78□□□□□ -1.8
DEPDC1-203ENST00000488146 CC2D2BQ6DHV5 1058 aa3.78□□□□□ -1.8
DEPDC1-203ENST00000488146 COL23A1Q86Y22 540 aaPredicted RBP3.78□□□□□ -1.8
DEPDC1-203ENST00000488146 IFNL2Q8IZJ0 200 aa3.78□□□□□ -1.8
DEPDC1-203ENST00000488146 DDRGK1Q96HY6 314 aa3.78□□□□□ -1.8
DEPDC1-203ENST00000488146 MAP3K7O43318 606 aa3.77□□□□□ -1.81
DEPDC1-203ENST00000488146 FCHSD2O94868 740 aa3.77□□□□□ -1.81
DEPDC1-203ENST00000488146 ITGAEP38570 1179 aa3.77□□□□□ -1.81
DEPDC1-203ENST00000488146 HIC1Q14526 733 aa3.77□□□□□ -1.81
DEPDC1-203ENST00000488146 STYK1Q6J9G0 422 aa3.77□□□□□ -1.81
DEPDC1-203ENST00000488146 L3MBTL2Q969R5 705 aa3.77□□□□□ -1.81
DEPDC1-203ENST00000488146 NBPF1Q3BBV0 1214 aa3.77□□□□□ -1.81
DEPDC1-203ENST00000488146 ARSIQ5FYB1 569 aa3.77□□□□□ -1.81
DEPDC1-203ENST00000488146 ZNF687Q8N1G0 1237 aa3.77□□□□□ -1.81
DEPDC1-203ENST00000488146 OXER1Q8TDS5 423 aa3.77□□□□□ -1.81
DEPDC1-203ENST00000488146 TFCP2L1Q9NZI6 479 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms