RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 CHADLQ6NUI6 762 aa23.43■■□□□ 1.34
MCF2L-226ENST00000486210 TAOK3Q9H2K8 898 aa23.43■■□□□ 1.34
MCF2L-226ENST00000486210 CREBZFQ9NS37 354 aa23.43■■□□□ 1.34
MCF2L-226ENST00000486210 TEFQ10587 303 aa23.42■■□□□ 1.34
MCF2L-226ENST00000486210 TEX13AQ9BXU3 409 aaPredicted RBP23.42■■□□□ 1.34
MCF2L-226ENST00000486210 MKRN1Q9UHC7 482 aaKnown RBP23.42■■□□□ 1.34
MCF2L-226ENST00000486210 SRGNP10124 158 aa23.41■■□□□ 1.34
MCF2L-226ENST00000486210 GNAT3A8MTJ3 354 aa23.4■■□□□ 1.34
MCF2L-226ENST00000486210 STYK1Q6J9G0 422 aa23.4■■□□□ 1.34
MCF2L-226ENST00000486210 PRPF40BQ6NWY9 871 aaKnown RBP23.4■■□□□ 1.34
MCF2L-226ENST00000486210 CNBD1Q8NA66 436 aa23.4■■□□□ 1.34
MCF2L-226ENST00000486210 CNKSR1Q969H4 720 aa23.4■■□□□ 1.34
MCF2L-226ENST00000486210 SETDB2Q96T68 719 aa23.4■■□□□ 1.34
MCF2L-226ENST00000486210 SCN4AP35499 1836 aa23.4■■□□□ 1.34
MCF2L-226ENST00000486210 U2SURPO15042 1029 aaKnown RBP23.39■■□□□ 1.33
MCF2L-226ENST00000486210 KCNQ3O43525 872 aa23.39■■□□□ 1.33
MCF2L-226ENST00000486210 CCDC184Q52MB2 194 aa23.39■■□□□ 1.33
MCF2L-226ENST00000486210 CEMIPQ8WUJ3 1361 aa23.39■■□□□ 1.33
MCF2L-226ENST00000486210 GAS2L2Q8NHY3 880 aa23.38■■□□□ 1.33
MCF2L-226ENST00000486210 FMNL2Q96PY5 1086 aa23.38■■□□□ 1.33
MCF2L-226ENST00000486210 PASKQ96RG2 1323 aa23.37■■□□□ 1.33
MCF2L-226ENST00000486210 C7orf43Q8WVR3 580 aa23.37■■□□□ 1.33
MCF2L-226ENST00000486210 MASTLQ96GX5 879 aa23.37■■□□□ 1.33
MCF2L-226ENST00000486210 PIP4K2AP48426 406 aaPredicted RBP23.36■■□□□ 1.33
MCF2L-226ENST00000486210 ST5P78524 1137 aa23.36■■□□□ 1.33
MCF2L-226ENST00000486210 DZIP3Q86Y13 1208 aaKnown RBP23.36■■□□□ 1.33
MCF2L-226ENST00000486210 CFAP53Q96M91 514 aa23.36■■□□□ 1.33
MCF2L-226ENST00000486210 CNTNAP1P78357 1384 aa23.36■■□□□ 1.33
MCF2L-226ENST00000486210 USP16Q9Y5T5 823 aa23.35■■□□□ 1.33
MCF2L-226ENST00000486210 ADAMTSL1Q8N6G6 1762 aa23.35■■□□□ 1.33
MCF2L-226ENST00000486210 PRAMEF22A3QJZ6 481 aa23.34■■□□□ 1.33
MCF2L-226ENST00000486210 NPHP1O15259 732 aa23.34■■□□□ 1.33
MCF2L-226ENST00000486210 FOXN1O15353 648 aa23.34■■□□□ 1.33
MCF2L-226ENST00000486210 SOGA3Q5TF21 947 aa23.34■■□□□ 1.33
MCF2L-226ENST00000486210 MIER1Q8N108 512 aa23.34■■□□□ 1.33
MCF2L-226ENST00000486210 L3MBTL3Q96JM7 780 aaPredicted RBP23.34■■□□□ 1.33
MCF2L-226ENST00000486210 TAF1DQ9H5J8 278 aaPredicted RBP23.33■■□□□ 1.33
MCF2L-226ENST00000486210 BTBD11A6QL63 1104 aa23.32■■□□□ 1.32
MCF2L-226ENST00000486210 LDHDQ86WU2 507 aa23.32■■□□□ 1.32
MCF2L-226ENST00000486210 PHACTR3Q96KR7 559 aa23.32■■□□□ 1.32
MCF2L-226ENST00000486210 IQCA1LA6NCM1 817 aa23.31■■□□□ 1.32
MCF2L-226ENST00000486210 NPM2Q86SE8 214 aaKnown RBP23.31■■□□□ 1.32
MCF2L-226ENST00000486210 ZNF541Q9H0D2 1346 aa23.31■■□□□ 1.32
MCF2L-226ENST00000486210 ITGBL1O95965 494 aaPredicted RBP23.3■■□□□ 1.32
MCF2L-226ENST00000486210 CCDC93Q567U6 631 aa23.3■■□□□ 1.32
MCF2L-226ENST00000486210 OLFM4Q6UX06 510 aa23.3■■□□□ 1.32
MCF2L-226ENST00000486210 CLEC4GQ6UXB4 293 aa23.3■■□□□ 1.32
MCF2L-226ENST00000486210 NUDCQ9Y266 331 aa23.3■■□□□ 1.32
MCF2L-226ENST00000486210 KLRG2A4D1S0 409 aaPredicted RBP23.29■■□□□ 1.32
MCF2L-226ENST00000486210 NBPF5PQ86XG9 351 aaPredicted RBP23.29■■□□□ 1.32
MCF2L-226ENST00000486210 NPR1P16066 1061 aa23.28■■□□□ 1.32
MCF2L-226ENST00000486210 VEGFBP49765 207 aa23.28■■□□□ 1.32
MCF2L-226ENST00000486210 FKBP4Q02790 459 aaKnown RBP eCLIP23.28■■□□□ 1.32
MCF2L-226ENST00000486210 ZNF277Q9NRM2 450 aaPredicted RBP23.28■■□□□ 1.32
MCF2L-226ENST00000486210 PRKAR2BP31323 418 aa23.27■■□□□ 1.32
MCF2L-226ENST00000486210 RSPH6AQ9H0K4 717 aa23.27■■□□□ 1.32
MCF2L-226ENST00000486210 PRDM10Q9NQV6 1147 aa23.27■■□□□ 1.32
MCF2L-226ENST00000486210 TMEM88BA6NKF7 163 aa23.26■■□□□ 1.31
MCF2L-226ENST00000486210 MRS2Q9HD23 443 aa23.26■■□□□ 1.31
MCF2L-226ENST00000486210 NBPF26B4DH59 902 aa23.25■■□□□ 1.31
MCF2L-226ENST00000486210 EAPPQ56P03 285 aaPredicted RBP23.25■■□□□ 1.31
MCF2L-226ENST00000486210 NBPF10Q6P3W6 841 aaKnown RBP23.25■■□□□ 1.31
MCF2L-226ENST00000486210 NBPF15Q8N660 670 aa23.25■■□□□ 1.31
MCF2L-226ENST00000486210 SNED1Q8TER0 1413 aa23.25■■□□□ 1.31
MCF2L-226ENST00000486210 HACL1Q9UJ83 578 aa23.24■■□□□ 1.31
MCF2L-226ENST00000486210 ZNF652Q9Y2D9 606 aa23.24■■□□□ 1.31
MCF2L-226ENST00000486210 SNRPA1P09661 255 aaKnown RBP23.23■■□□□ 1.31
MCF2L-226ENST00000486210 U2AF1L5P0DN76 240 aaPredicted RBP23.23■■□□□ 1.31
MCF2L-226ENST00000486210 EPHX2P34913 555 aa23.23■■□□□ 1.31
MCF2L-226ENST00000486210 U2AF1Q01081 240 aaKnown RBP eCLIP23.23■■□□□ 1.31
MCF2L-226ENST00000486210 NIP7Q9Y221 180 aaKnown RBP eCLIP23.23■■□□□ 1.31
MCF2L-226ENST00000486210 RNF123Q5XPI4 1314 aa23.23■■□□□ 1.31
MCF2L-226ENST00000486210 FZD9O00144 591 aa23.22■■□□□ 1.31
MCF2L-226ENST00000486210 TPTE2Q6XPS3 522 aa23.22■■□□□ 1.31
MCF2L-226ENST00000486210 MCM10Q7L590 875 aa23.22■■□□□ 1.31
MCF2L-226ENST00000486210 WBP1LQ9NX94 342 aa23.22■■□□□ 1.31
MCF2L-226ENST00000486210 COL4A5P29400 1685 aa23.22■■□□□ 1.31
MCF2L-226ENST00000486210 LAMB4A4D0S4 1761 aa23.22■■□□□ 1.31
MCF2L-226ENST00000486210 FAM177BA6PVY3 158 aa23.21■■□□□ 1.31
MCF2L-226ENST00000486210 CCER2I3L3R5 266 aa23.21■■□□□ 1.31
MCF2L-226ENST00000486210 CTCFP49711 727 aaPredicted RBP23.21■■□□□ 1.31
MCF2L-226ENST00000486210 HLFQ16534 295 aa23.21■■□□□ 1.31
MCF2L-226ENST00000486210 RTKN2Q8IZC4 609 aa23.21■■□□□ 1.31
MCF2L-226ENST00000486210 LTBP1Q14766 1721 aa23.21■■□□□ 1.31
MCF2L-226ENST00000486210 RGL2O15211 777 aa23.2■■□□□ 1.3
MCF2L-226ENST00000486210 IARSP41252 1262 aaKnown RBP23.2■■□□□ 1.3
MCF2L-226ENST00000486210 MAP1SQ66K74 1059 aaPredicted RBP23.2■■□□□ 1.3
MCF2L-226ENST00000486210 SYNE4Q8N205 404 aa23.2■■□□□ 1.3
MCF2L-226ENST00000486210 RTF1Q92541 710 aaKnown RBP23.2■■□□□ 1.3
MCF2L-226ENST00000486210 CLEC11AQ9Y240 323 aa23.2■■□□□ 1.3
MCF2L-226ENST00000486210 RASSF10A6NK89 507 aa23.19■■□□□ 1.3
MCF2L-226ENST00000486210 DCTN1Q14203 1278 aa23.19■■□□□ 1.3
MCF2L-226ENST00000486210 PNISRQ8TF01 805 aaKnown RBP23.19■■□□□ 1.3
MCF2L-226ENST00000486210 AIDAQ96BJ3 306 aa23.19■■□□□ 1.3
MCF2L-226ENST00000486210 NUP98P52948 1817 aa23.19■■□□□ 1.3
MCF2L-226ENST00000486210 LBX1P52954 281 aa23.18■■□□□ 1.3
MCF2L-226ENST00000486210 CNTROBQ8N137 903 aa23.18■■□□□ 1.3
MCF2L-226ENST00000486210 ADAMTS8Q9UP79 889 aa23.18■■□□□ 1.3
MCF2L-226ENST00000486210 ABCC12Q96J65 1359 aa23.17■■□□□ 1.3
MCF2L-226ENST00000486210 ALDH1B1P30837 517 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms