RNA–Protein interactions for RNA: ENST00000486044.1

PDE6D-205, Transcript of phosphodiesterase 6D, humanhuman

TSL 2

Gene PDE6D, Length 1,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-205ENST00000486044 PRPF40BQ6NWY9 871 aaKnown RBP21.7■■□□□ 1.06
PDE6D-205ENST00000486044 CREBZFQ9NS37 354 aa21.7■■□□□ 1.06
PDE6D-205ENST00000486044 SIPA1L3O60292 1781 aaPredicted RBP21.69■■□□□ 1.06
PDE6D-205ENST00000486044 ZNF652Q9Y2D9 606 aa21.69■■□□□ 1.06
PDE6D-205ENST00000486044 COL11A2P13942 1736 aaPredicted RBP21.69■■□□□ 1.06
PDE6D-205ENST00000486044 IQCA1LA6NCM1 817 aa21.68■■□□□ 1.06
PDE6D-205ENST00000486044 DDNO94850 711 aaPredicted RBP21.68■■□□□ 1.06
PDE6D-205ENST00000486044 CNGB1Q14028 1251 aaPredicted RBP21.68■■□□□ 1.06
PDE6D-205ENST00000486044 CLEC4GQ6UXB4 293 aa21.68■■□□□ 1.06
PDE6D-205ENST00000486044 CEMIPQ8WUJ3 1361 aa21.68■■□□□ 1.06
PDE6D-205ENST00000486044 COL3A1P02461 1466 aaPredicted RBP21.68■■□□□ 1.06
PDE6D-205ENST00000486044 NBPF5PQ86XG9 351 aaPredicted RBP21.67■■□□□ 1.06
PDE6D-205ENST00000486044 CFAP53Q96M91 514 aa21.67■■□□□ 1.06
PDE6D-205ENST00000486044 SLX4Q8IY92 1834 aa21.66■■□□□ 1.06
PDE6D-205ENST00000486044 PRKAR2BP31323 418 aa21.65■■□□□ 1.06
PDE6D-205ENST00000486044 CCDC93Q567U6 631 aa21.65■■□□□ 1.06
PDE6D-205ENST00000486044 RTF1Q92541 710 aaKnown RBP21.65■■□□□ 1.06
PDE6D-205ENST00000486044 USP16Q9Y5T5 823 aa21.65■■□□□ 1.06
PDE6D-205ENST00000486044 KCNQ3O43525 872 aa21.64■■□□□ 1.05
PDE6D-205ENST00000486044 SNRPA1P09661 255 aaKnown RBP21.64■■□□□ 1.05
PDE6D-205ENST00000486044 NPR1P16066 1061 aa21.64■■□□□ 1.05
PDE6D-205ENST00000486044 TPTE2Q6XPS3 522 aa21.64■■□□□ 1.05
PDE6D-205ENST00000486044 PHACTR3Q96KR7 559 aa21.64■■□□□ 1.05
PDE6D-205ENST00000486044 MKRN1Q9UHC7 482 aaKnown RBP21.64■■□□□ 1.05
PDE6D-205ENST00000486044 NUDCQ9Y266 331 aa21.64■■□□□ 1.05
PDE6D-205ENST00000486044 LDHDQ86WU2 507 aa21.63■■□□□ 1.05
PDE6D-205ENST00000486044 CACNA1SQ13698 1873 aa21.62■■□□□ 1.05
PDE6D-205ENST00000486044 BCORQ6W2J9 1755 aa21.62■■□□□ 1.05
PDE6D-205ENST00000486044 ARFGEF2Q9Y6D5 1785 aa21.62■■□□□ 1.05
PDE6D-205ENST00000486044 RGL2O15211 777 aa21.62■■□□□ 1.05
PDE6D-205ENST00000486044 C7orf43Q8WVR3 580 aa21.62■■□□□ 1.05
PDE6D-205ENST00000486044 L3MBTL3Q96JM7 780 aaPredicted RBP21.62■■□□□ 1.05
PDE6D-205ENST00000486044 RSPH6AQ9H0K4 717 aa21.62■■□□□ 1.05
PDE6D-205ENST00000486044 POTEIP0CG38 1075 aa21.61■■□□□ 1.05
PDE6D-205ENST00000486044 POTEJP0CG39 1038 aa21.61■■□□□ 1.05
PDE6D-205ENST00000486044 RTKN2Q8IZC4 609 aa21.61■■□□□ 1.05
PDE6D-205ENST00000486044 SCN4AP35499 1836 aa21.6■■□□□ 1.05
PDE6D-205ENST00000486044 PIP4K2AP48426 406 aaPredicted RBP21.6■■□□□ 1.05
PDE6D-205ENST00000486044 FKBP4Q02790 459 aaKnown RBP eCLIP21.6■■□□□ 1.05
PDE6D-205ENST00000486044 TAF1DQ9H5J8 278 aaPredicted RBP21.6■■□□□ 1.05
PDE6D-205ENST00000486044 KLRG2A4D1S0 409 aaPredicted RBP21.59■■□□□ 1.05
PDE6D-205ENST00000486044 ALDH1B1P30837 517 aa21.59■■□□□ 1.05
PDE6D-205ENST00000486044 NIP7Q9Y221 180 aaKnown RBP eCLIP21.59■■□□□ 1.05
PDE6D-205ENST00000486044 GTF2E1P29083 439 aaPredicted RBP21.58■■□□□ 1.05
PDE6D-205ENST00000486044 CNTNAP1P78357 1384 aa21.58■■□□□ 1.04
PDE6D-205ENST00000486044 PRAMEF22A3QJZ6 481 aa21.57■■□□□ 1.04
PDE6D-205ENST00000486044 U2AF1L5P0DN76 240 aaPredicted RBP21.57■■□□□ 1.04
PDE6D-205ENST00000486044 U2AF1Q01081 240 aaKnown RBP eCLIP21.57■■□□□ 1.04
PDE6D-205ENST00000486044 EAPPQ56P03 285 aaPredicted RBP21.57■■□□□ 1.04
PDE6D-205ENST00000486044 MCM10Q7L590 875 aa21.57■■□□□ 1.04
PDE6D-205ENST00000486044 HACL1Q9UJ83 578 aa21.57■■□□□ 1.04
PDE6D-205ENST00000486044 PASKQ96RG2 1323 aa21.56■■□□□ 1.04
PDE6D-205ENST00000486044 TMEM88BA6NKF7 163 aa21.56■■□□□ 1.04
PDE6D-205ENST00000486044 HTATSF1O43719 755 aaKnown RBP21.56■■□□□ 1.04
PDE6D-205ENST00000486044 AIDAQ96BJ3 306 aa21.56■■□□□ 1.04
PDE6D-205ENST00000486044 ZNF277Q9NRM2 450 aaPredicted RBP21.56■■□□□ 1.04
PDE6D-205ENST00000486044 CLEC11AQ9Y240 323 aa21.56■■□□□ 1.04
PDE6D-205ENST00000486044 PNMA8AQ86V59 439 aaPredicted RBP21.55■■□□□ 1.04
PDE6D-205ENST00000486044 FAM177BA6PVY3 158 aa21.54■■□□□ 1.04
PDE6D-205ENST00000486044 NBPF26B4DH59 902 aa21.54■■□□□ 1.04
PDE6D-205ENST00000486044 EPHX2P34913 555 aa21.54■■□□□ 1.04
PDE6D-205ENST00000486044 NBPF10Q6P3W6 841 aaKnown RBP21.54■■□□□ 1.04
PDE6D-205ENST00000486044 NBPF15Q8N660 670 aa21.54■■□□□ 1.04
PDE6D-205ENST00000486044 ITGBL1O95965 494 aaPredicted RBP21.53■■□□□ 1.04
PDE6D-205ENST00000486044 TAF7Q15545 349 aaPredicted RBP21.53■■□□□ 1.04
PDE6D-205ENST00000486044 PRDM10Q9NQV6 1147 aa21.53■■□□□ 1.04
PDE6D-205ENST00000486044 ZNF541Q9H0D2 1346 aa21.53■■□□□ 1.04
PDE6D-205ENST00000486044 FOXN1O15353 648 aa21.52■■□□□ 1.04
PDE6D-205ENST00000486044 IARSP41252 1262 aaKnown RBP21.52■■□□□ 1.04
PDE6D-205ENST00000486044 SYNE4Q8N205 404 aa21.52■■□□□ 1.04
PDE6D-205ENST00000486044 JDP2Q8WYK2 163 aa21.52■■□□□ 1.04
PDE6D-205ENST00000486044 NYXQ9GZU5 481 aa21.52■■□□□ 1.04
PDE6D-205ENST00000486044 FZD9O00144 591 aa21.51■■□□□ 1.03
PDE6D-205ENST00000486044 CTCFP49711 727 aaPredicted RBP21.51■■□□□ 1.03
PDE6D-205ENST00000486044 VEGFBP49765 207 aa21.51■■□□□ 1.03
PDE6D-205ENST00000486044 CC2D2BQ6DHV5 1058 aa21.51■■□□□ 1.03
PDE6D-205ENST00000486044 GPC2Q8N158 579 aa21.51■■□□□ 1.03
PDE6D-205ENST00000486044 NEFMP07197 916 aa21.5■■□□□ 1.03
PDE6D-205ENST00000486044 DCTN1Q14203 1278 aa21.5■■□□□ 1.03
PDE6D-205ENST00000486044 HLFQ16534 295 aa21.5■■□□□ 1.03
PDE6D-205ENST00000486044 OLFM4Q6UX06 510 aa21.5■■□□□ 1.03
PDE6D-205ENST00000486044 PSMD1Q99460 953 aa21.5■■□□□ 1.03
PDE6D-205ENST00000486044 GRIPAP1Q4V328 841 aa21.49■■□□□ 1.03
PDE6D-205ENST00000486044 CNTROBQ8N137 903 aa21.49■■□□□ 1.03
PDE6D-205ENST00000486044 ERVV-1B6SEH8 477 aa21.48■■□□□ 1.03
PDE6D-205ENST00000486044 PPP2R1AP30153 589 aa21.48■■□□□ 1.03
PDE6D-205ENST00000486044 CRY2Q49AN0 593 aa21.48■■□□□ 1.03
PDE6D-205ENST00000486044 PNISRQ8TF01 805 aaKnown RBP21.48■■□□□ 1.03
PDE6D-205ENST00000486044 RNF123Q5XPI4 1314 aa21.48■■□□□ 1.03
PDE6D-205ENST00000486044 EIF6P56537 245 aaKnown RBP21.47■■□□□ 1.03
PDE6D-205ENST00000486044 DEFB115Q30KQ5 88 aa21.47■■□□□ 1.03
PDE6D-205ENST00000486044 RPGRQ92834 1020 aaKnown RBP21.47■■□□□ 1.03
PDE6D-205ENST00000486044 LMOD1P29536 600 aaPredicted RBP21.46■■□□□ 1.03
PDE6D-205ENST00000486044 MAP1SQ66K74 1059 aaPredicted RBP21.46■■□□□ 1.03
PDE6D-205ENST00000486044 KIF6Q6ZMV9 814 aa21.46■■□□□ 1.03
PDE6D-205ENST00000486044 NGEFQ8N5V2 710 aa21.46■■□□□ 1.03
PDE6D-205ENST00000486044 WBP1LQ9NX94 342 aa21.46■■□□□ 1.03
PDE6D-205ENST00000486044 RASSF10A6NK89 507 aa21.45■■□□□ 1.02
PDE6D-205ENST00000486044 MIS18AQ9NYP9 233 aa21.45■■□□□ 1.02
PDE6D-205ENST00000486044 ADAMTSL1Q8N6G6 1762 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms