RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 LMOD3Q0VAK6 560 aa13.88□□□□□ -0.19
DDX56-212ENST00000485367 C2CD5Q86YS7 1000 aa13.88□□□□□ -0.19
DDX56-212ENST00000485367 RUNDC1Q96C34 613 aa13.88□□□□□ -0.19
DDX56-212ENST00000485367 TSPYL4Q9UJ04 414 aa13.88□□□□□ -0.19
DDX56-212ENST00000485367 ADAMTS8Q9UP79 889 aa13.88□□□□□ -0.19
DDX56-212ENST00000485367 LAMB4A4D0S4 1761 aa13.88□□□□□ -0.19
DDX56-212ENST00000485367 CARMIL3Q8ND23 1372 aa13.88□□□□□ -0.19
DDX56-212ENST00000485367 BCORQ6W2J9 1755 aa13.88□□□□□ -0.19
DDX56-212ENST00000485367 NPHP1O15259 732 aa13.88□□□□□ -0.19
DDX56-212ENST00000485367 CCDC24Q8N4L8 307 aa13.88□□□□□ -0.19
DDX56-212ENST00000485367 ZNF526Q8TF50 670 aaPredicted RBP13.88□□□□□ -0.19
DDX56-212ENST00000485367 H0YIN7 160 aa13.87□□□□□ -0.19
DDX56-212ENST00000485367 PRR5LQ6MZQ0 368 aa13.87□□□□□ -0.19
DDX56-212ENST00000485367 NGEFQ8N5V2 710 aa13.87□□□□□ -0.19
DDX56-212ENST00000485367 ZNF652Q9Y2D9 606 aa13.87□□□□□ -0.19
DDX56-212ENST00000485367 ADCY9O60503 1353 aa13.87□□□□□ -0.19
DDX56-212ENST00000485367 ANKRD31Q8N7Z5 1873 aa13.86□□□□□ -0.19
DDX56-212ENST00000485367 CLEC4GQ6UXB4 293 aa13.86□□□□□ -0.19
DDX56-212ENST00000485367 CNBD1Q8NA66 436 aa13.86□□□□□ -0.19
DDX56-212ENST00000485367 BRIP1Q9BX63 1249 aa13.86□□□□□ -0.19
DDX56-212ENST00000485367 GPBP1L1Q9HC44 474 aaPredicted RBP13.86□□□□□ -0.19
DDX56-212ENST00000485367 MYL6BP14649 208 aa13.85□□□□□ -0.19
DDX56-212ENST00000485367 PDE6BP35913 854 aa13.85□□□□□ -0.19
DDX56-212ENST00000485367 DLEC1Q9Y238 1755 aa13.85□□□□□ -0.19
DDX56-212ENST00000485367 C1QTNF8P60827 252 aa13.84□□□□□ -0.19
DDX56-212ENST00000485367 ST5P78524 1137 aa13.84□□□□□ -0.19
DDX56-212ENST00000485367 NBPF5PQ86XG9 351 aaPredicted RBP13.84□□□□□ -0.19
DDX56-212ENST00000485367 TTLL6Q8N841 843 aa13.84□□□□□ -0.19
DDX56-212ENST00000485367 ZNF622Q969S3 477 aaKnown RBP eCLIP13.84□□□□□ -0.198e-7■■■□□ 14.9
DDX56-212ENST00000485367 BABAM1Q9NWV8 329 aa13.84□□□□□ -0.19
DDX56-212ENST00000485367 NIP7Q9Y221 180 aaKnown RBP eCLIP13.84□□□□□ -0.19
DDX56-212ENST00000485367 LAS1LQ9Y4W2 734 aaKnown RBP13.84□□□□□ -0.19
DDX56-212ENST00000485367 RNF123Q5XPI4 1314 aa13.84□□□□□ -0.19
DDX56-212ENST00000485367 HLFQ16534 295 aa13.83□□□□□ -0.19
DDX56-212ENST00000485367 TRIM35Q9UPQ4 493 aa13.83□□□□□ -0.19
DDX56-212ENST00000485367 FAM177BA6PVY3 158 aa13.83□□□□□ -0.2
DDX56-212ENST00000485367 EIF2S2P20042 333 aaKnown RBP13.83□□□□□ -0.2
DDX56-212ENST00000485367 C9orf131Q5VYM1 1079 aa13.83□□□□□ -0.2
DDX56-212ENST00000485367 KIF6Q6ZMV9 814 aa13.83□□□□□ -0.2
DDX56-212ENST00000485367 PDZRN3Q9UPQ7 1066 aa13.83□□□□□ -0.2
DDX56-212ENST00000485367 RGL2O15211 777 aa13.82□□□□□ -0.2
DDX56-212ENST00000485367 ANP32AP39687 249 aaKnown RBP13.82□□□□□ -0.2
DDX56-212ENST00000485367 B4GALNT3Q6L9W6 998 aa13.82□□□□□ -0.2
DDX56-212ENST00000485367 TTLL7Q6ZT98 887 aa13.82□□□□□ -0.2
DDX56-212ENST00000485367 MRS2Q9HD23 443 aa13.82□□□□□ -0.2
DDX56-212ENST00000485367 TPTE2Q6XPS3 522 aa13.81□□□□□ -0.2
DDX56-212ENST00000485367 MAP3K15Q6ZN16 1313 aa13.81□□□□□ -0.2
DDX56-212ENST00000485367 COL11A2P13942 1736 aaPredicted RBP13.81□□□□□ -0.2
DDX56-212ENST00000485367 CHL1O00533 1208 aa13.81□□□□□ -0.2
DDX56-212ENST00000485367 IPO9Q96P70 1041 aaKnown RBP13.81□□□□□ -0.2
DDX56-212ENST00000485367 ZBTB3Q9H5J0 574 aa13.81□□□□□ -0.2
DDX56-212ENST00000485367 RNF181Q9P0P0 153 aa13.81□□□□□ -0.2
DDX56-212ENST00000485367 ZNF219Q9P2Y4 722 aaPredicted RBP13.81□□□□□ -0.2
DDX56-212ENST00000485367 NUP98P52948 1817 aa13.81□□□□□ -0.2
DDX56-212ENST00000485367 ERBB4Q15303 1308 aa13.8□□□□□ -0.2
DDX56-212ENST00000485367 ERVV-1B6SEH8 477 aa13.8□□□□□ -0.2
DDX56-212ENST00000485367 APAF1O14727 1248 aa13.8□□□□□ -0.2
DDX56-212ENST00000485367 SBF1O95248 1867 aa13.8□□□□□ -0.2
DDX56-212ENST00000485367 RASSF7Q02833 373 aa13.8□□□□□ -0.2
DDX56-212ENST00000485367 NECTIN2Q92692 538 aa13.8□□□□□ -0.2
DDX56-212ENST00000485367 GTF2E1P29083 439 aaPredicted RBP13.79□□□□□ -0.2
DDX56-212ENST00000485367 KRT24Q2M2I5 525 aa13.79□□□□□ -0.2
DDX56-212ENST00000485367 CCDC184Q52MB2 194 aa13.79□□□□□ -0.2
DDX56-212ENST00000485367 C21orf2O43822 256 aa13.78□□□□□ -0.2
DDX56-212ENST00000485367 ANXA1P04083 346 aa13.78□□□□□ -0.2
DDX56-212ENST00000485367 SRGNP10124 158 aa13.78□□□□□ -0.2
DDX56-212ENST00000485367 PROSER3Q2NL68 480 aa13.78□□□□□ -0.2
DDX56-212ENST00000485367 STYK1Q6J9G0 422 aa13.78□□□□□ -0.2
DDX56-212ENST00000485367 CNKSR1Q969H4 720 aa13.78□□□□□ -0.2
DDX56-212ENST00000485367 CACNA1SQ13698 1873 aa13.78□□□□□ -0.2
DDX56-212ENST00000485367 GPTP24298 496 aa13.78□□□□□ -0.2
DDX56-212ENST00000485367 PDIA6Q15084 440 aa13.78□□□□□ -0.2
DDX56-212ENST00000485367 MASTLQ96GX5 879 aa13.78□□□□□ -0.2
DDX56-212ENST00000485367 SLX4Q8IY92 1834 aa13.77□□□□□ -0.21
DDX56-212ENST00000485367 SENP3-EIF4A1A0A087X0R7 540 aa13.77□□□□□ -0.21
DDX56-212ENST00000485367 RTL5Q5HYW3 569 aaPredicted RBP13.77□□□□□ -0.21
DDX56-212ENST00000485367 FAM9BQ8IZU0 186 aa13.77□□□□□ -0.21
DDX56-212ENST00000485367 CCDC88AQ3V6T2 1871 aa13.77□□□□□ -0.21
DDX56-212ENST00000485367 LMNB1P20700 586 aa13.76□□□□□ -0.21
DDX56-212ENST00000485367 PRPF40BQ6NWY9 871 aaKnown RBP13.76□□□□□ -0.21
DDX56-212ENST00000485367 CFAP44Q96MT7 982 aa13.76□□□□□ -0.21
DDX56-212ENST00000485367 NYXQ9GZU5 481 aa13.76□□□□□ -0.21
DDX56-212ENST00000485367 NFKBIEO00221 500 aa13.76□□□□□ -0.21
DDX56-212ENST00000485367 NPR1P16066 1061 aa13.76□□□□□ -0.21
DDX56-212ENST00000485367 LRP10Q7Z4F1 713 aa13.76□□□□□ -0.21
DDX56-212ENST00000485367 NUTM1Q86Y26 1132 aa13.76□□□□□ -0.21
DDX56-212ENST00000485367 KIF3CO14782 793 aa13.75□□□□□ -0.21
DDX56-212ENST00000485367 PRELPP51888 382 aa13.75□□□□□ -0.21
DDX56-212ENST00000485367 AIMP1Q12904 312 aaKnown RBP13.75□□□□□ -0.21
DDX56-212ENST00000485367 ERFEQ4G0M1 354 aa13.75□□□□□ -0.21
DDX56-212ENST00000485367 GIGYF2Q6Y7W6 1299 aaKnown RBP13.75□□□□□ -0.21
DDX56-212ENST00000485367 COPS6Q7L5N1 327 aa13.75□□□□□ -0.21
DDX56-212ENST00000485367 ZNF34Q8IZ26 560 aa13.75□□□□□ -0.21
DDX56-212ENST00000485367 XAGE3Q8WTP9 111 aa13.75□□□□□ -0.21
DDX56-212ENST00000485367 NMRK2Q9NPI5 230 aa13.75□□□□□ -0.21
DDX56-212ENST00000485367 MBIPQ9NS73 344 aa13.75□□□□□ -0.21
DDX56-212ENST00000485367 KLRG2A4D1S0 409 aaPredicted RBP13.74□□□□□ -0.21
DDX56-212ENST00000485367 CALD1Q05682 793 aaKnown RBP13.74□□□□□ -0.21
DDX56-212ENST00000485367 HDGFL1Q5TGJ6 251 aa13.74□□□□□ -0.21
DDX56-212ENST00000485367 SUSD4Q5VX71 490 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms