RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 TMC6Q7Z403 805 aa17.58■□□□□ 0.4
RXRA-203ENST00000484822 CNNM1Q9NRU3 951 aa17.58■□□□□ 0.4
RXRA-203ENST00000484822 MSH6P52701 1360 aa17.58■□□□□ 0.4
RXRA-203ENST00000484822 STARD3NLO95772 234 aa17.58■□□□□ 0.4
RXRA-203ENST00000484822 DNA2P51530 1060 aa17.58■□□□□ 0.4
RXRA-203ENST00000484822 NOLC1Q14978 699 aaKnown RBP eCLIP17.58■□□□□ 0.4
RXRA-203ENST00000484822 NKTRP30414 1462 aaKnown RBP17.57■□□□□ 0.4
RXRA-203ENST00000484822 IGSF3O75054 1194 aa17.57■□□□□ 0.4
RXRA-203ENST00000484822 ZNF165P49910 485 aa17.57■□□□□ 0.4
RXRA-203ENST00000484822 TOM1O60784 492 aa17.57■□□□□ 0.4
RXRA-203ENST00000484822 ALDH1L2Q3SY69 923 aa17.57■□□□□ 0.4
RXRA-203ENST00000484822 ZNF652Q9Y2D9 606 aa17.57■□□□□ 0.4
RXRA-203ENST00000484822 ATP7AQ04656 1500 aa17.57■□□□□ 0.4
RXRA-203ENST00000484822 NACAP1Q9BZK3 213 aa17.57■□□□□ 0.4
RXRA-203ENST00000484822 ATP10AO60312 1499 aa17.57■□□□□ 0.4
RXRA-203ENST00000484822 IMMTQ16891 758 aaKnown RBP17.57■□□□□ 0.4
RXRA-203ENST00000484822 MNAT1P51948 309 aa17.56■□□□□ 0.4
RXRA-203ENST00000484822 ARHGEF12Q9NZN5 1544 aa17.56■□□□□ 0.4
RXRA-203ENST00000484822 RAB11FIP3O75154 756 aa17.56■□□□□ 0.4
RXRA-203ENST00000484822 SPA17Q15506 151 aa17.56■□□□□ 0.4
RXRA-203ENST00000484822 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.56■□□□□ 0.41e-6■■■■□ 22.7
RXRA-203ENST00000484822 BIN1O00499 593 aa17.56■□□□□ 0.4
RXRA-203ENST00000484822 IGHDP01880 384 aa17.56■□□□□ 0.4
RXRA-203ENST00000484822 ANKRD18AQ8IVF6 992 aa17.56■□□□□ 0.4
RXRA-203ENST00000484822 FAM107BQ9H098 131 aa17.56■□□□□ 0.4
RXRA-203ENST00000484822 EZRP15311 586 aaKnown RBP17.55■□□□□ 0.4
RXRA-203ENST00000484822 TBC1D9Q6ZT07 1266 aa17.55■□□□□ 0.4
RXRA-203ENST00000484822 DDX19AQ9NUU7 478 aaKnown RBP17.55■□□□□ 0.4
RXRA-203ENST00000484822 LIMCH1Q9UPQ0 1083 aa17.55■□□□□ 0.4
RXRA-203ENST00000484822 TMOD3Q9NYL9 352 aa17.55■□□□□ 0.4
RXRA-203ENST00000484822 GSDMDP57764 484 aa17.55■□□□□ 0.4
RXRA-203ENST00000484822 LRSAM1Q6UWE0 723 aa17.55■□□□□ 0.4
RXRA-203ENST00000484822 PIBF1Q8WXW3 757 aa17.55■□□□□ 0.4
RXRA-203ENST00000484822 SH2B1Q9NRF2 756 aaPredicted RBP17.55■□□□□ 0.4
RXRA-203ENST00000484822 CTNNA3Q9UI47 895 aa17.55■□□□□ 0.4
RXRA-203ENST00000484822 GIMAP6Q6P9H5 292 aa17.55■□□□□ 0.4
RXRA-203ENST00000484822 USHBP1Q8N6Y0 703 aa17.55■□□□□ 0.4
RXRA-203ENST00000484822 PAXBP1Q9Y5B6 917 aa17.55■□□□□ 0.4
RXRA-203ENST00000484822 LUZP1Q86V48 1076 aa17.54■□□□□ 0.4
RXRA-203ENST00000484822 BCCIPQ9P287 314 aaKnown RBP eCLIP17.54■□□□□ 0.4
RXRA-203ENST00000484822 NGLY1Q96IV0 654 aa17.54■□□□□ 0.4
RXRA-203ENST00000484822 TMOD2Q9NZR1 351 aa17.54■□□□□ 0.4
RXRA-203ENST00000484822 MCM3P25205 808 aa17.54■□□□□ 0.4
RXRA-203ENST00000484822 CCDC57Q2TAC2 916 aa17.54■□□□□ 0.4
RXRA-203ENST00000484822 UVSSAQ2YD98 709 aa17.54■□□□□ 0.4
RXRA-203ENST00000484822 ZNF397Q8NF99 534 aaPredicted RBP17.54■□□□□ 0.4
RXRA-203ENST00000484822 NEO1Q92859 1461 aa17.54■□□□□ 0.4
RXRA-203ENST00000484822 ZKSCAN5Q9Y2L8 839 aa17.54■□□□□ 0.4
RXRA-203ENST00000484822 FSIP1Q8NA03 581 aa17.53■□□□□ 0.4
RXRA-203ENST00000484822 CTAGE5O15320 804 aa17.53■□□□□ 0.4
RXRA-203ENST00000484822 STX6O43752 255 aa17.53■□□□□ 0.4
RXRA-203ENST00000484822 CTR9Q6PD62 1173 aa17.53■□□□□ 0.4
RXRA-203ENST00000484822 MICALCLQ6ZW33 695 aa17.53■□□□□ 0.4
RXRA-203ENST00000484822 TTC12Q9H892 705 aaPredicted RBP17.53■□□□□ 0.4
RXRA-203ENST00000484822 GLRX3O76003 335 aaKnown RBP17.53■□□□□ 0.4
RXRA-203ENST00000484822 NPHP3Q7Z494 1330 aa17.52■□□□□ 0.4
RXRA-203ENST00000484822 PPIP5K1Q6PFW1 1433 aa17.52■□□□□ 0.4
RXRA-203ENST00000484822 GNG11P61952 73 aa17.52■□□□□ 0.4
RXRA-203ENST00000484822 IFFO1Q0D2I5 559 aa17.52■□□□□ 0.4
RXRA-203ENST00000484822 UBAC1Q9BSL1 405 aa17.52■□□□□ 0.4
RXRA-203ENST00000484822 DNAAF4Q8WXU2 420 aa17.52■□□□□ 0.4
RXRA-203ENST00000484822 MIS18AQ9NYP9 233 aa17.52■□□□□ 0.4
RXRA-203ENST00000484822 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.52■□□□□ 0.4
RXRA-203ENST00000484822 V9GYY5 206 aaPredicted RBP17.52■□□□□ 0.4
RXRA-203ENST00000484822 GTF2A1P52655 376 aaPredicted RBP17.52■□□□□ 0.39
RXRA-203ENST00000484822 KIF1BPQ96EK5 621 aa17.52■□□□□ 0.39
RXRA-203ENST00000484822 PLEKHH1Q9ULM0 1364 aa17.52■□□□□ 0.39
RXRA-203ENST00000484822 BMP2KQ9NSY1 1161 aaPredicted RBP17.52■□□□□ 0.39
RXRA-203ENST00000484822 PZPP20742 1482 aa17.51■□□□□ 0.39
RXRA-203ENST00000484822 PAFAH1B1P43034 410 aa17.51■□□□□ 0.39
RXRA-203ENST00000484822 ATP2B2Q01814 1243 aa17.51■□□□□ 0.39
RXRA-203ENST00000484822 ASXL1Q8IXJ9 1541 aa17.51■□□□□ 0.39
RXRA-203ENST00000484822 SOGA3Q5TF21 947 aa17.51■□□□□ 0.39
RXRA-203ENST00000484822 LIG1P18858 919 aa17.51■□□□□ 0.39
RXRA-203ENST00000484822 GJB2P29033 226 aa17.51■□□□□ 0.39
RXRA-203ENST00000484822 SPECC1Q5M775 1068 aa17.51■□□□□ 0.39
RXRA-203ENST00000484822 C8orf76Q96K31 380 aa17.51■□□□□ 0.39
RXRA-203ENST00000484822 MPHOSPH8Q99549 860 aa17.51■□□□□ 0.39
RXRA-203ENST00000484822 NUP88Q99567 741 aaPredicted RBP17.51■□□□□ 0.39
RXRA-203ENST00000484822 UBE2HP62256 183 aa17.51■□□□□ 0.39
RXRA-203ENST00000484822 CCDC186Q7Z3E2 898 aa17.51■□□□□ 0.39
RXRA-203ENST00000484822 GBP2P32456 591 aaPredicted RBP17.5■□□□□ 0.39
RXRA-203ENST00000484822 LARP1Q6PKG0 1096 aaKnown RBP17.5■□□□□ 0.39
RXRA-203ENST00000484822 BOLA2Q9H3K6 86 aa17.5■□□□□ 0.39
RXRA-203ENST00000484822 ADAMTS2O95450 1211 aa17.5■□□□□ 0.39
RXRA-203ENST00000484822 TRIM27P14373 513 aa17.5■□□□□ 0.39
RXRA-203ENST00000484822 TDO2P48775 406 aa17.5■□□□□ 0.39
RXRA-203ENST00000484822 STX1AQ16623 288 aa17.5■□□□□ 0.39
RXRA-203ENST00000484822 BMP2KLQ5H9B9 411 aa17.5■□□□□ 0.39
RXRA-203ENST00000484822 MAST1Q9Y2H9 1570 aa17.5■□□□□ 0.39
RXRA-203ENST00000484822 TMEM132AQ24JP5 1023 aa17.5■□□□□ 0.39
RXRA-203ENST00000484822 CCDC12Q8WUD4 166 aaPredicted RBP17.5■□□□□ 0.39
RXRA-203ENST00000484822 TBX22Q9Y458 520 aa17.5■□□□□ 0.39
RXRA-203ENST00000484822 POTEB2H3BUK9 544 aa17.49■□□□□ 0.39
RXRA-203ENST00000484822 RSPH14Q9UHP6 348 aa17.49■□□□□ 0.39
RXRA-203ENST00000484822 ZPR1O75312 459 aa17.49■□□□□ 0.39
RXRA-203ENST00000484822 ISM2Q6H9L7 571 aa17.49■□□□□ 0.39
RXRA-203ENST00000484822 WASF1Q92558 559 aa17.49■□□□□ 0.39
RXRA-203ENST00000484822 RNF216Q9NWF9 866 aaPredicted RBP17.49■□□□□ 0.39
RXRA-203ENST00000484822 PTCD1O75127 700 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms