RNA–Protein interactions for RNA: ENST00000484555.1

PABPC4-215, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-215ENST00000484555 ST5P78524 1137 aa16.81■□□□□ 0.28
PABPC4-215ENST00000484555 LDHDQ86WU2 507 aa16.81■□□□□ 0.28
PABPC4-215ENST00000484555 C7orf43Q8WVR3 580 aa16.81■□□□□ 0.28
PABPC4-215ENST00000484555 FMNL2Q96PY5 1086 aa16.81■□□□□ 0.28
PABPC4-215ENST00000484555 SCN4AP35499 1836 aa16.81■□□□□ 0.28
PABPC4-215ENST00000484555 FOXN1O15353 648 aa16.8■□□□□ 0.28
PABPC4-215ENST00000484555 A1BGP04217 495 aa16.8■□□□□ 0.28
PABPC4-215ENST00000484555 GAS2L2Q8NHY3 880 aa16.8■□□□□ 0.28
PABPC4-215ENST00000484555 TAF1DQ9H5J8 278 aaPredicted RBP16.8■□□□□ 0.28
PABPC4-215ENST00000484555 ITGBL1O95965 494 aaPredicted RBP16.79■□□□□ 0.28
PABPC4-215ENST00000484555 CLEC4GQ6UXB4 293 aa16.79■□□□□ 0.28
PABPC4-215ENST00000484555 NPM2Q86SE8 214 aaKnown RBP16.79■□□□□ 0.28
PABPC4-215ENST00000484555 ZNF330Q9Y3S2 320 aaPredicted RBP16.79■□□□□ 0.28
PABPC4-215ENST00000484555 CEMIPQ8WUJ3 1361 aa16.78■□□□□ 0.28
PABPC4-215ENST00000484555 KLRG2A4D1S0 409 aaPredicted RBP16.78■□□□□ 0.28
PABPC4-215ENST00000484555 BCORQ6W2J9 1755 aa16.78■□□□□ 0.28
PABPC4-215ENST00000484555 TMEM88BA6NKF7 163 aa16.77■□□□□ 0.28
PABPC4-215ENST00000484555 NPHP1O15259 732 aa16.77■□□□□ 0.28
PABPC4-215ENST00000484555 CCDC93Q567U6 631 aa16.77■□□□□ 0.28
PABPC4-215ENST00000484555 DZIP3Q86Y13 1208 aaKnown RBP16.77■□□□□ 0.28
PABPC4-215ENST00000484555 COL3A1P02461 1466 aaPredicted RBP16.77■□□□□ 0.28
PABPC4-215ENST00000484555 CACNA1SQ13698 1873 aa16.77■□□□□ 0.27
PABPC4-215ENST00000484555 RGL2O15211 777 aa16.76■□□□□ 0.27
PABPC4-215ENST00000484555 CTCFP49711 727 aaPredicted RBP16.76■□□□□ 0.27
PABPC4-215ENST00000484555 FKBP4Q02790 459 aaKnown RBP eCLIP16.76■□□□□ 0.27
PABPC4-215ENST00000484555 KIF7Q2M1P5 1343 aa16.75■□□□□ 0.27
PABPC4-215ENST00000484555 NPR1P16066 1061 aa16.75■□□□□ 0.27
PABPC4-215ENST00000484555 VEGFBP49765 207 aa16.75■□□□□ 0.27
PABPC4-215ENST00000484555 WBP1LQ9NX94 342 aa16.75■□□□□ 0.27
PABPC4-215ENST00000484555 ADAMTSL1Q8N6G6 1762 aa16.74■□□□□ 0.27
PABPC4-215ENST00000484555 BTBD11A6QL63 1104 aa16.74■□□□□ 0.27
PABPC4-215ENST00000484555 KCNQ3O43525 872 aa16.74■□□□□ 0.27
PABPC4-215ENST00000484555 NBPF5PQ86XG9 351 aaPredicted RBP16.74■□□□□ 0.27
PABPC4-215ENST00000484555 RTKN2Q8IZC4 609 aa16.74■□□□□ 0.27
PABPC4-215ENST00000484555 PCGF6Q9BYE7 350 aa16.74■□□□□ 0.27
PABPC4-215ENST00000484555 USP16Q9Y5T5 823 aa16.74■□□□□ 0.27
PABPC4-215ENST00000484555 NPC1L1Q9UHC9 1359 aa16.74■□□□□ 0.27
PABPC4-215ENST00000484555 U2SURPO15042 1029 aaKnown RBP16.73■□□□□ 0.27
PABPC4-215ENST00000484555 CC2D1BQ5T0F9 858 aaKnown RBP16.73■□□□□ 0.27
PABPC4-215ENST00000484555 AIDAQ96BJ3 306 aa16.73■□□□□ 0.27
PABPC4-215ENST00000484555 HACL1Q9UJ83 578 aa16.73■□□□□ 0.27
PABPC4-215ENST00000484555 ZNF652Q9Y2D9 606 aa16.73■□□□□ 0.27
PABPC4-215ENST00000484555 ZNF541Q9H0D2 1346 aa16.72■□□□□ 0.27
PABPC4-215ENST00000484555 RASSF10A6NK89 507 aa16.72■□□□□ 0.27
PABPC4-215ENST00000484555 FZD9O00144 591 aa16.72■□□□□ 0.27
PABPC4-215ENST00000484555 TPTE2Q6XPS3 522 aa16.72■□□□□ 0.27
PABPC4-215ENST00000484555 PNMA8AQ86V59 439 aaPredicted RBP16.72■□□□□ 0.27
PABPC4-215ENST00000484555 ZNF277Q9NRM2 450 aaPredicted RBP16.72■□□□□ 0.27
PABPC4-215ENST00000484555 SNRPA1P09661 255 aaKnown RBP16.71■□□□□ 0.27
PABPC4-215ENST00000484555 EPHX2P34913 555 aa16.71■□□□□ 0.27
PABPC4-215ENST00000484555 ALDH1B1P30837 517 aa16.7■□□□□ 0.26
PABPC4-215ENST00000484555 DEFB115Q30KQ5 88 aa16.7■□□□□ 0.26
PABPC4-215ENST00000484555 EAPPQ56P03 285 aaPredicted RBP16.7■□□□□ 0.26
PABPC4-215ENST00000484555 PHACTR3Q96KR7 559 aa16.7■□□□□ 0.26
PABPC4-215ENST00000484555 PRAMEF22A3QJZ6 481 aa16.69■□□□□ 0.26
PABPC4-215ENST00000484555 IARSP41252 1262 aaKnown RBP16.69■□□□□ 0.26
PABPC4-215ENST00000484555 PIP4K2AP48426 406 aaPredicted RBP16.69■□□□□ 0.26
PABPC4-215ENST00000484555 LBX1P52954 281 aa16.69■□□□□ 0.26
PABPC4-215ENST00000484555 CNTROBQ8N137 903 aa16.69■□□□□ 0.26
PABPC4-215ENST00000484555 GPC2Q8N158 579 aa16.69■□□□□ 0.26
PABPC4-215ENST00000484555 CLEC11AQ9Y240 323 aa16.69■□□□□ 0.26
PABPC4-215ENST00000484555 SNED1Q8TER0 1413 aa16.69■□□□□ 0.26
PABPC4-215ENST00000484555 OLFM4Q6UX06 510 aa16.68■□□□□ 0.26
PABPC4-215ENST00000484555 SYNE4Q8N205 404 aa16.68■□□□□ 0.26
PABPC4-215ENST00000484555 PSMD1Q99460 953 aa16.68■□□□□ 0.26
PABPC4-215ENST00000484555 RSPH6AQ9H0K4 717 aa16.68■□□□□ 0.26
PABPC4-215ENST00000484555 NIP7Q9Y221 180 aaKnown RBP eCLIP16.68■□□□□ 0.26
PABPC4-215ENST00000484555 NBPF26B4DH59 902 aa16.67■□□□□ 0.26
PABPC4-215ENST00000484555 HSPA8P11142 646 aaKnown RBP16.67■□□□□ 0.26
PABPC4-215ENST00000484555 PRKAR2BP31323 418 aa16.67■□□□□ 0.26
PABPC4-215ENST00000484555 MAP2K1Q02750 393 aaPredicted RBP16.67■□□□□ 0.26
PABPC4-215ENST00000484555 NBPF10Q6P3W6 841 aaKnown RBP16.67■□□□□ 0.26
PABPC4-215ENST00000484555 NBPF15Q8N660 670 aa16.67■□□□□ 0.26
PABPC4-215ENST00000484555 RNF123Q5XPI4 1314 aa16.67■□□□□ 0.26
PABPC4-215ENST00000484555 MAP1SQ66K74 1059 aaPredicted RBP16.66■□□□□ 0.26
PABPC4-215ENST00000484555 CC2D2BQ6DHV5 1058 aa16.66■□□□□ 0.26
PABPC4-215ENST00000484555 WDR33Q9C0J8 1336 aaKnown RBP16.66■□□□□ 0.26
PABPC4-215ENST00000484555 CRY2Q49AN0 593 aa16.65■□□□□ 0.26
PABPC4-215ENST00000484555 HTATSF1O43719 755 aaKnown RBP16.64■□□□□ 0.25
PABPC4-215ENST00000484555 GRIPAP1Q4V328 841 aa16.64■□□□□ 0.25
PABPC4-215ENST00000484555 JDP2Q8WYK2 163 aa16.64■□□□□ 0.25
PABPC4-215ENST00000484555 DDX21Q9NR30 783 aaKnown RBP eCLIP16.64■□□□□ 0.25
PABPC4-215ENST00000484555 HLFQ16534 295 aa16.63■□□□□ 0.25
PABPC4-215ENST00000484555 RTF1Q92541 710 aaKnown RBP16.63■□□□□ 0.25
PABPC4-215ENST00000484555 ABHD8Q96I13 439 aa16.63■□□□□ 0.25
PABPC4-215ENST00000484555 FAM177BA6PVY3 158 aa16.62■□□□□ 0.25
PABPC4-215ENST00000484555 ERVV-1B6SEH8 477 aa16.62■□□□□ 0.25
PABPC4-215ENST00000484555 SLC34A2O95436 690 aa16.62■□□□□ 0.25
PABPC4-215ENST00000484555 GTF2E1P29083 439 aaPredicted RBP16.62■□□□□ 0.25
PABPC4-215ENST00000484555 HOXA10P31260 410 aaPredicted RBP16.62■□□□□ 0.25
PABPC4-215ENST00000484555 EIF6P56537 245 aaKnown RBP16.62■□□□□ 0.25
PABPC4-215ENST00000484555 MCM10Q7L590 875 aa16.62■□□□□ 0.25
PABPC4-215ENST00000484555 CFAP53Q96M91 514 aa16.62■□□□□ 0.25
PABPC4-215ENST00000484555 NYXQ9GZU5 481 aa16.62■□□□□ 0.25
PABPC4-215ENST00000484555 NUDCQ9Y266 331 aa16.62■□□□□ 0.25
PABPC4-215ENST00000484555 THSD7BQ9C0I4 1608 aa16.62■□□□□ 0.25
PABPC4-215ENST00000484555 RIC1Q4ADV7 1423 aa16.62■□□□□ 0.25
PABPC4-215ENST00000484555 ABT1Q9ULW3 272 aaKnown RBP16.61■□□□□ 0.25
PABPC4-215ENST00000484555 COL4A5P29400 1685 aa16.61■□□□□ 0.25
PABPC4-215ENST00000484555 LTBP1Q14766 1721 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms