RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 PALD1Q9ULE6 856 aa13.78□□□□□ -0.2
SEC61A1-205ENST00000483956 V9GYY5 206 aaPredicted RBP13.78□□□□□ -0.2
SEC61A1-205ENST00000483956 G2E3Q7L622 706 aa13.77□□□□□ -0.2
SEC61A1-205ENST00000483956 NOL10Q9BSC4 688 aaKnown RBP13.77□□□□□ -0.2
SEC61A1-205ENST00000483956 GNAI3P08754 354 aa13.77□□□□□ -0.21
SEC61A1-205ENST00000483956 TNNT1P13805 278 aa13.77□□□□□ -0.21
SEC61A1-205ENST00000483956 PXDNLA1KZ92 1463 aa13.77□□□□□ -0.21
SEC61A1-205ENST00000483956 PRR29P0C7W0 189 aa13.77□□□□□ -0.21
SEC61A1-205ENST00000483956 PTGS1P23219 599 aa13.77□□□□□ -0.21
SEC61A1-205ENST00000483956 EXOC6BQ9Y2D4 811 aa13.77□□□□□ -0.21
SEC61A1-205ENST00000483956 KDRP35968 1356 aa13.77□□□□□ -0.21
SEC61A1-205ENST00000483956 F6X3S4 739 aa13.76□□□□□ -0.21
SEC61A1-205ENST00000483956 APPP05067 770 aa13.76□□□□□ -0.21
SEC61A1-205ENST00000483956 SLC4A10Q6U841 1118 aa13.76□□□□□ -0.21
SEC61A1-205ENST00000483956 TMEM87AQ8NBN3 555 aa13.76□□□□□ -0.21
SEC61A1-205ENST00000483956 KCNG1Q9UIX4 513 aa13.76□□□□□ -0.21
SEC61A1-205ENST00000483956 DHX16O60231 1041 aaKnown RBP13.76□□□□□ -0.21
SEC61A1-205ENST00000483956 USP6P35125 1406 aa13.76□□□□□ -0.21
SEC61A1-205ENST00000483956 FBXO38Q6PIJ6 1188 aa13.76□□□□□ -0.21
SEC61A1-205ENST00000483956 WDR33Q9C0J8 1336 aaKnown RBP13.76□□□□□ -0.21
SEC61A1-205ENST00000483956 TSPYL4Q9UJ04 414 aa13.76□□□□□ -0.21
SEC61A1-205ENST00000483956 TPM3P06753 285 aa13.75□□□□□ -0.21
SEC61A1-205ENST00000483956 ATP8B2P98198 1209 aa13.75□□□□□ -0.21
SEC61A1-205ENST00000483956 USP48Q86UV5 1035 aa13.75□□□□□ -0.21
SEC61A1-205ENST00000483956 RASSF4Q9H2L5 321 aa13.75□□□□□ -0.21
SEC61A1-205ENST00000483956 ANO2Q9NQ90 1003 aa13.75□□□□□ -0.21
SEC61A1-205ENST00000483956 GTF2A1P52655 376 aaPredicted RBP13.75□□□□□ -0.21
SEC61A1-205ENST00000483956 FAM193AP78312 1265 aa13.75□□□□□ -0.21
SEC61A1-205ENST00000483956 HSP90AB2PQ58FF8 381 aa13.75□□□□□ -0.21
SEC61A1-205ENST00000483956 NFATC2IPQ8NCF5 419 aa13.75□□□□□ -0.21
SEC61A1-205ENST00000483956 RTF1Q92541 710 aaKnown RBP13.75□□□□□ -0.21
SEC61A1-205ENST00000483956 GYS2P54840 703 aa13.74□□□□□ -0.21
SEC61A1-205ENST00000483956 CCDC183Q5T5S1 534 aa13.74□□□□□ -0.21
SEC61A1-205ENST00000483956 CREBRFQ8IUR6 639 aa13.74□□□□□ -0.21
SEC61A1-205ENST00000483956 RIMS1Q86UR5 1692 aaKnown RBP13.74□□□□□ -0.21
SEC61A1-205ENST00000483956 SOS1Q07889 1333 aaPredicted RBP13.74□□□□□ -0.21
SEC61A1-205ENST00000483956 PLEKHG3A1L390 1219 aa13.74□□□□□ -0.21
SEC61A1-205ENST00000483956 LRMPQ12912 555 aa13.74□□□□□ -0.21
SEC61A1-205ENST00000483956 TSHZ3Q63HK5 1081 aa13.74□□□□□ -0.21
SEC61A1-205ENST00000483956 PLPPR3Q6T4P5 718 aa13.74□□□□□ -0.21
SEC61A1-205ENST00000483956 KIF1BPQ96EK5 621 aa13.74□□□□□ -0.21
SEC61A1-205ENST00000483956 STK31Q9BXU1 1019 aa13.74□□□□□ -0.21
SEC61A1-205ENST00000483956 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.74□□□□□ -0.21
SEC61A1-205ENST00000483956 MAP3K19Q56UN5 1328 aa13.74□□□□□ -0.21
SEC61A1-205ENST00000483956 ZNF592Q92610 1267 aa13.74□□□□□ -0.21
SEC61A1-205ENST00000483956 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.73□□□□□ -0.21
SEC61A1-205ENST00000483956 TRIM66O15016 1216 aa13.73□□□□□ -0.21
SEC61A1-205ENST00000483956 NEK11Q8NG66 645 aa13.73□□□□□ -0.21
SEC61A1-205ENST00000483956 GTF3C6Q969F1 213 aa13.73□□□□□ -0.21
SEC61A1-205ENST00000483956 ZNF446Q9NWS9 450 aa13.73□□□□□ -0.21
SEC61A1-205ENST00000483956 ZNF215Q9UL58 517 aaPredicted RBP13.73□□□□□ -0.21
SEC61A1-205ENST00000483956 RPAP1Q9BWH6 1393 aaPredicted RBP13.73□□□□□ -0.21
SEC61A1-205ENST00000483956 PNMA6EA0A0J9YXQ4 647 aa13.73□□□□□ -0.21
SEC61A1-205ENST00000483956 GOLGA6L6A8MZA4 724 aa13.73□□□□□ -0.21
SEC61A1-205ENST00000483956 HSPA4P34932 840 aa13.73□□□□□ -0.21
SEC61A1-205ENST00000483956 MTHFSDQ2M296 383 aaKnown RBP13.73□□□□□ -0.21
SEC61A1-205ENST00000483956 MIS18AQ9NYP9 233 aa13.73□□□□□ -0.21
SEC61A1-205ENST00000483956 PAXBP1Q9Y5B6 917 aa13.73□□□□□ -0.21
SEC61A1-205ENST00000483956 ACEP12821 1306 aa13.72□□□□□ -0.21
SEC61A1-205ENST00000483956 CLGNO14967 610 aa13.72□□□□□ -0.21
SEC61A1-205ENST00000483956 FLIIQ13045 1269 aa13.72□□□□□ -0.21
SEC61A1-205ENST00000483956 SYT10Q6XYQ8 523 aa13.72□□□□□ -0.21
SEC61A1-205ENST00000483956 C10orf67Q8IYJ2 551 aa13.72□□□□□ -0.21
SEC61A1-205ENST00000483956 HTATSF1O43719 755 aaKnown RBP13.72□□□□□ -0.21
SEC61A1-205ENST00000483956 ELF2Q15723 593 aa13.72□□□□□ -0.21
SEC61A1-205ENST00000483956 RILPL2Q969X0 211 aa13.72□□□□□ -0.21
SEC61A1-205ENST00000483956 ROBO2Q9HCK4 1378 aa13.72□□□□□ -0.21
SEC61A1-205ENST00000483956 FAM69CQ0P6D2 419 aa13.72□□□□□ -0.21
SEC61A1-205ENST00000483956 CRYBG1Q9Y4K1 1723 aa13.71□□□□□ -0.21
SEC61A1-205ENST00000483956 HDGFP51858 240 aaKnown RBP13.71□□□□□ -0.21
SEC61A1-205ENST00000483956 CCDC30Q5VVM6 783 aa13.71□□□□□ -0.21
SEC61A1-205ENST00000483956 SBNO1A3KN83 1393 aa13.71□□□□□ -0.21
SEC61A1-205ENST00000483956 FLT4P35916 1363 aa13.71□□□□□ -0.21
SEC61A1-205ENST00000483956 TCHHQ07283 1943 aa13.71□□□□□ -0.21
SEC61A1-205ENST00000483956 FOXO3O43524 673 aa13.71□□□□□ -0.22
SEC61A1-205ENST00000483956 EP400NLQ6ZTU2 488 aa13.71□□□□□ -0.22
SEC61A1-205ENST00000483956 UPF3BQ9BZI7 483 aaKnown RBP13.71□□□□□ -0.22
SEC61A1-205ENST00000483956 LCMT1Q9UIC8 334 aa13.71□□□□□ -0.22
SEC61A1-205ENST00000483956 IGSF1Q8N6C5 1336 aa13.7□□□□□ -0.22
SEC61A1-205ENST00000483956 GIMAP6Q6P9H5 292 aa13.7□□□□□ -0.22
SEC61A1-205ENST00000483956 UNC5CLQ8IV45 518 aa13.7□□□□□ -0.22
SEC61A1-205ENST00000483956 RAD50Q92878 1312 aa13.7□□□□□ -0.22
SEC61A1-205ENST00000483956 CCDC186Q7Z3E2 898 aa13.7□□□□□ -0.22
SEC61A1-205ENST00000483956 CEP170BQ9Y4F5 1589 aaPredicted RBP13.7□□□□□ -0.22
SEC61A1-205ENST00000483956 NPHP1O15259 732 aa13.69□□□□□ -0.22
SEC61A1-205ENST00000483956 TPD52L1Q16890 204 aaPredicted RBP13.69□□□□□ -0.22
SEC61A1-205ENST00000483956 ICE2Q659A1 982 aa13.69□□□□□ -0.22
SEC61A1-205ENST00000483956 NOL8Q76FK4 1167 aaKnown RBP13.69□□□□□ -0.22
SEC61A1-205ENST00000483956 DIP2BQ9P265 1576 aa13.69□□□□□ -0.22
SEC61A1-205ENST00000483956 TTC21AQ8NDW8 1320 aa13.69□□□□□ -0.22
SEC61A1-205ENST00000483956 SSH3Q8TE77 659 aa13.69□□□□□ -0.22
SEC61A1-205ENST00000483956 MYO1CO00159 1063 aa13.69□□□□□ -0.22
SEC61A1-205ENST00000483956 RAB11FIP3O75154 756 aa13.69□□□□□ -0.22
SEC61A1-205ENST00000483956 CEP135Q66GS9 1140 aa13.69□□□□□ -0.22
SEC61A1-205ENST00000483956 KRBA2Q6ZNG9 492 aa13.69□□□□□ -0.22
SEC61A1-205ENST00000483956 TTC14Q96N46 770 aa13.69□□□□□ -0.22
SEC61A1-205ENST00000483956 FUCA2Q9BTY2 467 aa13.69□□□□□ -0.22
SEC61A1-205ENST00000483956 TOMM22Q9NS69 142 aa13.69□□□□□ -0.22
SEC61A1-205ENST00000483956 LRRFIP2Q9Y608 721 aaKnown RBP13.69□□□□□ -0.22
SEC61A1-205ENST00000483956 CASQ1P31415 396 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms