RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 DICER1Q9UPY3 1922 aaKnown RBP25.8■■□□□ 1.72
R3HDM1-215ENST00000483021 APLP1P51693 650 aa25.8■■□□□ 1.72
R3HDM1-215ENST00000483021 PLEKHF1Q96S99 279 aa25.8■■□□□ 1.72
R3HDM1-215ENST00000483021 MAPK8IP3Q9UPT6 1336 aa25.8■■□□□ 1.72
R3HDM1-215ENST00000483021 NFE2L2Q16236 605 aa25.79■■□□□ 1.72
R3HDM1-215ENST00000483021 CCDC24Q8N4L8 307 aa25.78■■□□□ 1.72
R3HDM1-215ENST00000483021 NBPF26B4DH59 902 aa25.77■■□□□ 1.72
R3HDM1-215ENST00000483021 NFKBIEO00221 500 aa25.77■■□□□ 1.72
R3HDM1-215ENST00000483021 NBPF10Q6P3W6 841 aaKnown RBP25.77■■□□□ 1.72
R3HDM1-215ENST00000483021 NBPF5PQ86XG9 351 aaPredicted RBP25.77■■□□□ 1.72
R3HDM1-215ENST00000483021 NBPF15Q8N660 670 aa25.77■■□□□ 1.72
R3HDM1-215ENST00000483021 CNKSR1Q969H4 720 aa25.77■■□□□ 1.72
R3HDM1-215ENST00000483021 STYK1Q6J9G0 422 aa25.76■■□□□ 1.71
R3HDM1-215ENST00000483021 MIS18AQ9NYP9 233 aa25.76■■□□□ 1.71
R3HDM1-215ENST00000483021 WDR90Q96KV7 1748 aa25.76■■□□□ 1.71
R3HDM1-215ENST00000483021 SLX4Q8IY92 1834 aa25.76■■□□□ 1.71
R3HDM1-215ENST00000483021 FSTL1Q12841 308 aa25.75■■□□□ 1.71
R3HDM1-215ENST00000483021 RALBP1Q15311 655 aa25.75■■□□□ 1.71
R3HDM1-215ENST00000483021 RRAGCQ9HB90 399 aa25.75■■□□□ 1.71
R3HDM1-215ENST00000483021 C21orf2O43822 256 aa25.74■■□□□ 1.71
R3HDM1-215ENST00000483021 SRGNP10124 158 aa25.74■■□□□ 1.71
R3HDM1-215ENST00000483021 PRELPP51888 382 aa25.74■■□□□ 1.71
R3HDM1-215ENST00000483021 MASTLQ96GX5 879 aa25.74■■□□□ 1.71
R3HDM1-215ENST00000483021 LTBP3Q9NS15 1303 aa25.73■■□□□ 1.71
R3HDM1-215ENST00000483021 GLTPD2A6NH11 291 aa25.73■■□□□ 1.71
R3HDM1-215ENST00000483021 SOGA3Q5TF21 947 aa25.73■■□□□ 1.71
R3HDM1-215ENST00000483021 NIP7Q9Y221 180 aaKnown RBP eCLIP25.73■■□□□ 1.71
R3HDM1-215ENST00000483021 NUP98P52948 1817 aa25.72■■□□□ 1.71
R3HDM1-215ENST00000483021 TPTE2Q6XPS3 522 aa25.72■■□□□ 1.71
R3HDM1-215ENST00000483021 EIF4A1P60842 406 aaKnown RBP25.71■■□□□ 1.71
R3HDM1-215ENST00000483021 PRPF40BQ6NWY9 871 aaKnown RBP25.71■■□□□ 1.71
R3HDM1-215ENST00000483021 TAOK3Q9H2K8 898 aa25.7■■□□□ 1.7
R3HDM1-215ENST00000483021 ZNF219Q9P2Y4 722 aaPredicted RBP25.7■■□□□ 1.7
R3HDM1-215ENST00000483021 THUMPD2Q9BTF0 503 aaKnown RBP25.69■■□□□ 1.7
R3HDM1-215ENST00000483021 VEGFAP15692 232 aaPredicted RBP25.68■■□□□ 1.7
R3HDM1-215ENST00000483021 NPR1P16066 1061 aa25.68■■□□□ 1.7
R3HDM1-215ENST00000483021 SMC1BQ8NDV3 1235 aa25.68■■□□□ 1.7
R3HDM1-215ENST00000483021 KLRG2A4D1S0 409 aaPredicted RBP25.67■■□□□ 1.7
R3HDM1-215ENST00000483021 ERVV-1B6SEH8 477 aa25.67■■□□□ 1.7
R3HDM1-215ENST00000483021 HLFQ16534 295 aa25.67■■□□□ 1.7
R3HDM1-215ENST00000483021 ERFEQ4G0M1 354 aa25.67■■□□□ 1.7
R3HDM1-215ENST00000483021 DPY19L2Q6NUT2 758 aa25.67■■□□□ 1.7
R3HDM1-215ENST00000483021 KIF6Q6ZMV9 814 aa25.66■■□□□ 1.7
R3HDM1-215ENST00000483021 ERBB4Q15303 1308 aa25.65■■□□□ 1.7
R3HDM1-215ENST00000483021 MAP3K15Q6ZN16 1313 aa25.65■■□□□ 1.7
R3HDM1-215ENST00000483021 LMOD3Q0VAK6 560 aa25.65■■□□□ 1.7
R3HDM1-215ENST00000483021 NYXQ9GZU5 481 aa25.65■■□□□ 1.7
R3HDM1-215ENST00000483021 GTF2E1P29083 439 aaPredicted RBP25.64■■□□□ 1.7
R3HDM1-215ENST00000483021 CCDC93Q567U6 631 aa25.64■■□□□ 1.7
R3HDM1-215ENST00000483021 TSPYL4Q9UJ04 414 aa25.64■■□□□ 1.7
R3HDM1-215ENST00000483021 RRP7AQ9Y3A4 280 aaKnown RBP25.64■■□□□ 1.7
R3HDM1-215ENST00000483021 MYBBP1AQ9BQG0 1328 aaKnown RBP25.63■■□□□ 1.69
R3HDM1-215ENST00000483021 FAM177BA6PVY3 158 aa25.63■■□□□ 1.69
R3HDM1-215ENST00000483021 RIPK4P57078 832 aa25.63■■□□□ 1.69
R3HDM1-215ENST00000483021 NGEFQ8N5V2 710 aa25.63■■□□□ 1.69
R3HDM1-215ENST00000483021 BABAM1Q9NWV8 329 aa25.63■■□□□ 1.69
R3HDM1-215ENST00000483021 IBTKQ9P2D0 1353 aaPredicted RBP25.63■■□□□ 1.69
R3HDM1-215ENST00000483021 DNAJC5GQ8N7S2 189 aa25.62■■□□□ 1.69
R3HDM1-215ENST00000483021 MYL6BP14649 208 aa25.61■■□□□ 1.69
R3HDM1-215ENST00000483021 C7orf43Q8WVR3 580 aa25.61■■□□□ 1.69
R3HDM1-215ENST00000483021 RIC1Q4ADV7 1423 aa25.61■■□□□ 1.69
R3HDM1-215ENST00000483021 ALDH1B1P30837 517 aa25.6■■□□□ 1.69
R3HDM1-215ENST00000483021 DDX10Q13206 875 aaKnown RBP25.6■■□□□ 1.69
R3HDM1-215ENST00000483021 TTLL7Q6ZT98 887 aa25.6■■□□□ 1.69
R3HDM1-215ENST00000483021 TMPOP42166 694 aaKnown RBP25.59■■□□□ 1.69
R3HDM1-215ENST00000483021 ABCC12Q96J65 1359 aa25.58■■□□□ 1.69
R3HDM1-215ENST00000483021 FKBP4Q02790 459 aaKnown RBP eCLIP25.57■■□□□ 1.68
R3HDM1-215ENST00000483021 CRY2Q49AN0 593 aa25.57■■□□□ 1.68
R3HDM1-215ENST00000483021 ZBTB3Q9H5J0 574 aa25.57■■□□□ 1.68
R3HDM1-215ENST00000483021 ANKRD36CQ5JPF3 1778 aa25.56■■□□□ 1.68
R3HDM1-215ENST00000483021 SCN4AP35499 1836 aa25.56■■□□□ 1.68
R3HDM1-215ENST00000483021 RTKN2Q8IZC4 609 aa25.56■■□□□ 1.68
R3HDM1-215ENST00000483021 POTECB2RU33 542 aa25.55■■□□□ 1.68
R3HDM1-215ENST00000483021 GIGYF2Q6Y7W6 1299 aaKnown RBP25.55■■□□□ 1.68
R3HDM1-215ENST00000483021 NUTM1Q86Y26 1132 aa25.55■■□□□ 1.68
R3HDM1-215ENST00000483021 KLRG1Q96E93 195 aa25.55■■□□□ 1.68
R3HDM1-215ENST00000483021 UBN2Q6ZU65 1347 aa25.55■■□□□ 1.68
R3HDM1-215ENST00000483021 GPTP24298 496 aa25.54■■□□□ 1.68
R3HDM1-215ENST00000483021 WDR43Q15061 677 aaKnown RBP eCLIP25.54■■□□□ 1.68
R3HDM1-215ENST00000483021 EIF2S2P20042 333 aaKnown RBP25.53■■□□□ 1.68
R3HDM1-215ENST00000483021 HTRA3P83110 453 aa25.53■■□□□ 1.68
R3HDM1-215ENST00000483021 ZNF34Q8IZ26 560 aa25.53■■□□□ 1.68
R3HDM1-215ENST00000483021 DDNO94850 711 aaPredicted RBP25.52■■□□□ 1.68
R3HDM1-215ENST00000483021 PARP10Q53GL7 1025 aa25.52■■□□□ 1.68
R3HDM1-215ENST00000483021 RPGRQ92834 1020 aaKnown RBP25.52■■□□□ 1.68
R3HDM1-215ENST00000483021 RUNDC1Q96C34 613 aa25.52■■□□□ 1.68
R3HDM1-215ENST00000483021 PDIA6Q15084 440 aa25.51■■□□□ 1.67
R3HDM1-215ENST00000483021 SUSD4Q5VX71 490 aa25.51■■□□□ 1.67
R3HDM1-215ENST00000483021 CC2D2BQ6DHV5 1058 aa25.51■■□□□ 1.67
R3HDM1-215ENST00000483021 LRP10Q7Z4F1 713 aa25.51■■□□□ 1.67
R3HDM1-215ENST00000483021 PPP1R42Q7Z4L9 355 aa25.51■■□□□ 1.67
R3HDM1-215ENST00000483021 CCDC146Q8IYE0 955 aa25.51■■□□□ 1.67
R3HDM1-215ENST00000483021 IQCA1LA6NCM1 817 aa25.5■■□□□ 1.67
R3HDM1-215ENST00000483021 NTSR2O95665 410 aa25.5■■□□□ 1.67
R3HDM1-215ENST00000483021 IFFO2Q5TF58 517 aa25.5■■□□□ 1.67
R3HDM1-215ENST00000483021 SNED1Q8TER0 1413 aa25.5■■□□□ 1.67
R3HDM1-215ENST00000483021 ZNF277Q9NRM2 450 aaPredicted RBP25.5■■□□□ 1.67
R3HDM1-215ENST00000483021 HOXA10P31260 410 aaPredicted RBP25.49■■□□□ 1.67
R3HDM1-215ENST00000483021 NEUROD2Q15784 382 aa25.49■■□□□ 1.67
R3HDM1-215ENST00000483021 OLFM4Q6UX06 510 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms