RNA–Protein interactions for RNA: ENST00000482541.2

CCNC-204, Transcript of cyclin C, humanhuman

TSL 1 (best) BASIC

Gene CCNC, Length 1,704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-204ENST00000482541 PLEKHF1Q96S99 279 aa10.28□□□□□ -0.76
CCNC-204ENST00000482541 WWC3Q9ULE0 1092 aa10.28□□□□□ -0.76
CCNC-204ENST00000482541 BCS1LQ9Y276 419 aa10.28□□□□□ -0.76
CCNC-204ENST00000482541 KIAA1551Q9HCM1 1747 aa10.28□□□□□ -0.76
CCNC-204ENST00000482541 KCNQ3O43525 872 aa10.27□□□□□ -0.76
CCNC-204ENST00000482541 TAF7Q15545 349 aaPredicted RBP10.27□□□□□ -0.76
CCNC-204ENST00000482541 BCL2L12Q9HB09 334 aa10.27□□□□□ -0.76
CCNC-204ENST00000482541 PIM2Q9P1W9 311 aa10.27□□□□□ -0.76
CCNC-204ENST00000482541 N4BP2Q86UW6 1770 aaPredicted RBP10.27□□□□□ -0.76
CCNC-204ENST00000482541 SERPINB2P05120 415 aa10.27□□□□□ -0.77
CCNC-204ENST00000482541 SNRPA1P09661 255 aaKnown RBP10.27□□□□□ -0.77
CCNC-204ENST00000482541 DDX10Q13206 875 aaKnown RBP10.27□□□□□ -0.77
CCNC-204ENST00000482541 DCTN1Q14203 1278 aa10.27□□□□□ -0.77
CCNC-204ENST00000482541 ZNF467Q7Z7K2 595 aaPredicted RBP10.27□□□□□ -0.77
CCNC-204ENST00000482541 USP16Q9Y5T5 823 aa10.27□□□□□ -0.77
CCNC-204ENST00000482541 A1BGP04217 495 aa10.26□□□□□ -0.77
CCNC-204ENST00000482541 PIP4P2Q8N4L2 257 aa10.26□□□□□ -0.77
CCNC-204ENST00000482541 PNISRQ8TF01 805 aaKnown RBP10.26□□□□□ -0.77
CCNC-204ENST00000482541 UTRNP46939 3433 aa10.26□□□□□ -0.77
CCNC-204ENST00000482541 GIGYF1O75420 1035 aaPredicted RBP10.25□□□□□ -0.77
CCNC-204ENST00000482541 C1QTNF8P60827 252 aa10.25□□□□□ -0.77
CCNC-204ENST00000482541 TBC1D2BQ9UPU7 963 aa10.25□□□□□ -0.77
CCNC-204ENST00000482541 BRCA1P38398 1863 aaKnown RBP10.25□□□□□ -0.77
CCNC-204ENST00000482541 ADCY9O60503 1353 aa10.25□□□□□ -0.77
CCNC-204ENST00000482541 NFE2L2Q16236 605 aa10.24□□□□□ -0.77
CCNC-204ENST00000482541 DALRD3Q5D0E6 543 aaKnown RBP10.24□□□□□ -0.77
CCNC-204ENST00000482541 ARHGAP27Q6ZUM4 889 aa10.24□□□□□ -0.77
CCNC-204ENST00000482541 MAPK8IP3Q9UPT6 1336 aa10.24□□□□□ -0.77
CCNC-204ENST00000482541 GOLGB1Q14789 3259 aaKnown RBP10.24□□□□□ -0.77
CCNC-204ENST00000482541 NRXN2Q9P2S2 1712 aa10.24□□□□□ -0.77
CCNC-204ENST00000482541 ATP10DQ9P241 1426 aa10.24□□□□□ -0.77
CCNC-204ENST00000482541 CLEC4GQ6UXB4 293 aa10.24□□□□□ -0.77
CCNC-204ENST00000482541 GPBP1L1Q9HC44 474 aaPredicted RBP10.24□□□□□ -0.77
CCNC-204ENST00000482541 ZNF330Q9Y3S2 320 aaPredicted RBP10.24□□□□□ -0.77
CCNC-204ENST00000482541 DLG5Q8TDM6 1919 aa10.23□□□□□ -0.77
CCNC-204ENST00000482541 CHRNA5P30532 468 aa10.23□□□□□ -0.77
CCNC-204ENST00000482541 TBC1D9BQ66K14 1250 aa10.23□□□□□ -0.77
CCNC-204ENST00000482541 BICDL1Q6ZP65 573 aa10.23□□□□□ -0.77
CCNC-204ENST00000482541 DZIP3Q86Y13 1208 aaKnown RBP10.23□□□□□ -0.77
CCNC-204ENST00000482541 PCDHB8Q9UN66 801 aa10.23□□□□□ -0.77
CCNC-204ENST00000482541 PDZRN3Q9UPQ7 1066 aa10.23□□□□□ -0.77
CCNC-204ENST00000482541 PCDHB13Q9Y5F0 798 aa10.23□□□□□ -0.77
CCNC-204ENST00000482541 AFDNP55196 1824 aaKnown RBP10.23□□□□□ -0.77
CCNC-204ENST00000482541 ARFGEF1Q9Y6D6 1849 aa10.23□□□□□ -0.77
CCNC-204ENST00000482541 MYBBP1AQ9BQG0 1328 aaKnown RBP10.23□□□□□ -0.77
CCNC-204ENST00000482541 PRAMEF22A3QJZ6 481 aa10.22□□□□□ -0.77
CCNC-204ENST00000482541 CAMTA2O94983 1202 aa10.22□□□□□ -0.77
CCNC-204ENST00000482541 SETDB2Q96T68 719 aa10.22□□□□□ -0.77
CCNC-204ENST00000482541 MIS18AQ9NYP9 233 aa10.22□□□□□ -0.77
CCNC-204ENST00000482541 H0YIN7 160 aa10.21□□□□□ -0.77
CCNC-204ENST00000482541 BRIP1Q9BX63 1249 aa10.21□□□□□ -0.77
CCNC-204ENST00000482541 CARMIL3Q8ND23 1372 aa10.21□□□□□ -0.77
CCNC-204ENST00000482541 NBPF26B4DH59 902 aa10.21□□□□□ -0.78
CCNC-204ENST00000482541 PDE6BP35913 854 aa10.21□□□□□ -0.78
CCNC-204ENST00000482541 RIPK4P57078 832 aa10.21□□□□□ -0.78
CCNC-204ENST00000482541 PDAP1Q13442 181 aaKnown RBP10.21□□□□□ -0.78
CCNC-204ENST00000482541 NBPF10Q6P3W6 841 aaKnown RBP10.21□□□□□ -0.78
CCNC-204ENST00000482541 NBPF15Q8N660 670 aa10.21□□□□□ -0.78
CCNC-204ENST00000482541 TTLL6Q8N841 843 aa10.21□□□□□ -0.78
CCNC-204ENST00000482541 ZNF652Q9Y2D9 606 aa10.21□□□□□ -0.78
CCNC-204ENST00000482541 SCN7AQ01118 1682 aa10.2□□□□□ -0.78
CCNC-204ENST00000482541 PIP4K2AP48426 406 aaPredicted RBP10.2□□□□□ -0.78
CCNC-204ENST00000482541 EIF4A1P60842 406 aaKnown RBP10.2□□□□□ -0.78
CCNC-204ENST00000482541 LMOD3Q0VAK6 560 aa10.2□□□□□ -0.78
CCNC-204ENST00000482541 BABAM1Q9NWV8 329 aa10.2□□□□□ -0.78
CCNC-204ENST00000482541 TMPOP42166 694 aaKnown RBP10.19□□□□□ -0.78
CCNC-204ENST00000482541 PRR5LQ6MZQ0 368 aa10.19□□□□□ -0.78
CCNC-204ENST00000482541 C2CD5Q86YS7 1000 aa10.19□□□□□ -0.78
CCNC-204ENST00000482541 ZNF526Q8TF50 670 aaPredicted RBP10.19□□□□□ -0.78
CCNC-204ENST00000482541 THUMPD2Q9BTF0 503 aaKnown RBP10.19□□□□□ -0.78
CCNC-204ENST00000482541 RYDENQ9NUL5 291 aaKnown RBP10.19□□□□□ -0.78
CCNC-204ENST00000482541 NPHP1O15259 732 aa10.19□□□□□ -0.78
CCNC-204ENST00000482541 C9orf131Q5VYM1 1079 aa10.19□□□□□ -0.78
CCNC-204ENST00000482541 CNBD1Q8NA66 436 aa10.19□□□□□ -0.78
CCNC-204ENST00000482541 ZNF579Q8NAF0 562 aaKnown RBP10.19□□□□□ -0.78
CCNC-204ENST00000482541 KDM3BQ7LBC6 1761 aa10.18□□□□□ -0.78
CCNC-204ENST00000482541 DLEC1Q9Y238 1755 aa10.18□□□□□ -0.78
CCNC-204ENST00000482541 ZEB1P37275 1124 aaPredicted RBP10.18□□□□□ -0.78
CCNC-204ENST00000482541 ST5P78524 1137 aa10.18□□□□□ -0.78
CCNC-204ENST00000482541 WDR43Q15061 677 aaKnown RBP eCLIP10.18□□□□□ -0.78
CCNC-204ENST00000482541 BCORQ6W2J9 1755 aa10.18□□□□□ -0.78
CCNC-204ENST00000482541 TPTE2Q6XPS3 522 aa10.18□□□□□ -0.78
CCNC-204ENST00000482541 RUNDC1Q96C34 613 aa10.18□□□□□ -0.78
CCNC-204ENST00000482541 PRKRIP1Q9H875 184 aaPredicted RBP10.18□□□□□ -0.78
CCNC-204ENST00000482541 SENP3-EIF4A1A0A087X0R7 540 aa10.17□□□□□ -0.78
CCNC-204ENST00000482541 ERVV-1B6SEH8 477 aa10.17□□□□□ -0.78
CCNC-204ENST00000482541 KIF3CO14782 793 aa10.17□□□□□ -0.78
CCNC-204ENST00000482541 NBPF5PQ86XG9 351 aaPredicted RBP10.17□□□□□ -0.78
CCNC-204ENST00000482541 ZNF622Q969S3 477 aaKnown RBP eCLIP10.17□□□□□ -0.78
CCNC-204ENST00000482541 TSPYL4Q9UJ04 414 aa10.17□□□□□ -0.78
CCNC-204ENST00000482541 ADAMTS8Q9UP79 889 aa10.17□□□□□ -0.78
CCNC-204ENST00000482541 LAMB4A4D0S4 1761 aa10.17□□□□□ -0.78
CCNC-204ENST00000482541 ERBB4Q15303 1308 aa10.16□□□□□ -0.78
CCNC-204ENST00000482541 SRGNP10124 158 aa10.16□□□□□ -0.78
CCNC-204ENST00000482541 CNKSR1Q969H4 720 aa10.16□□□□□ -0.78
CCNC-204ENST00000482541 RNF181Q9P0P0 153 aa10.16□□□□□ -0.78
CCNC-204ENST00000482541 NIP7Q9Y221 180 aaKnown RBP eCLIP10.16□□□□□ -0.78
CCNC-204ENST00000482541 ANKRD31Q8N7Z5 1873 aa10.16□□□□□ -0.78
CCNC-204ENST00000482541 SBF1O95248 1867 aa10.16□□□□□ -0.78
CCNC-204ENST00000482541 ZC3H4Q9UPT8 1303 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms