RNA–Protein interactions for RNA: ENST00000480713.1

NDUFA3-211, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 2

Gene NDUFA3, Length 282 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-211ENST00000480713 SCN11AQ9UI33 1791 aa9.13□□□□□ -0.95
NDUFA3-211ENST00000480713 KIF7Q2M1P5 1343 aa9.12□□□□□ -0.95
NDUFA3-211ENST00000480713 U2SURPO15042 1029 aaKnown RBP9.12□□□□□ -0.95
NDUFA3-211ENST00000480713 FOXN1O15353 648 aa9.12□□□□□ -0.95
NDUFA3-211ENST00000480713 TPTE2Q6XPS3 522 aa9.12□□□□□ -0.95
NDUFA3-211ENST00000480713 DZIP3Q86Y13 1208 aaKnown RBP9.12□□□□□ -0.95
NDUFA3-211ENST00000480713 PHACTR3Q96KR7 559 aa9.12□□□□□ -0.95
NDUFA3-211ENST00000480713 PRDM10Q9NQV6 1147 aa9.12□□□□□ -0.95
NDUFA3-211ENST00000480713 CNTNAP1P78357 1384 aa9.12□□□□□ -0.95
NDUFA3-211ENST00000480713 CEMIPQ8WUJ3 1361 aa9.12□□□□□ -0.95
NDUFA3-211ENST00000480713 AFDNP55196 1824 aaKnown RBP9.11□□□□□ -0.95
NDUFA3-211ENST00000480713 TMEM88BA6NKF7 163 aa9.11□□□□□ -0.95
NDUFA3-211ENST00000480713 RGL2O15211 777 aa9.11□□□□□ -0.95
NDUFA3-211ENST00000480713 NPHP1O15259 732 aa9.11□□□□□ -0.95
NDUFA3-211ENST00000480713 NPR1P16066 1061 aa9.11□□□□□ -0.95
NDUFA3-211ENST00000480713 VEGFBP49765 207 aa9.11□□□□□ -0.95
NDUFA3-211ENST00000480713 FKBP4Q02790 459 aaKnown RBP eCLIP9.11□□□□□ -0.95
NDUFA3-211ENST00000480713 CCDC93Q567U6 631 aa9.11□□□□□ -0.95
NDUFA3-211ENST00000480713 NBPF5PQ86XG9 351 aaPredicted RBP9.11□□□□□ -0.95
NDUFA3-211ENST00000480713 RTKN2Q8IZC4 609 aa9.11□□□□□ -0.95
NDUFA3-211ENST00000480713 WBP1LQ9NX94 342 aa9.11□□□□□ -0.95
NDUFA3-211ENST00000480713 PRAMEF22A3QJZ6 481 aa9.1□□□□□ -0.95
NDUFA3-211ENST00000480713 FZD9O00144 591 aa9.1□□□□□ -0.95
NDUFA3-211ENST00000480713 SNRPA1P09661 255 aaKnown RBP9.1□□□□□ -0.95
NDUFA3-211ENST00000480713 PIP4K2AP48426 406 aaPredicted RBP9.1□□□□□ -0.95
NDUFA3-211ENST00000480713 CTCFP49711 727 aaPredicted RBP9.1□□□□□ -0.95
NDUFA3-211ENST00000480713 ALDH1B1P30837 517 aa9.09□□□□□ -0.95
NDUFA3-211ENST00000480713 OLFM4Q6UX06 510 aa9.09□□□□□ -0.95
NDUFA3-211ENST00000480713 PNMA8AQ86V59 439 aaPredicted RBP9.09□□□□□ -0.95
NDUFA3-211ENST00000480713 CNTROBQ8N137 903 aa9.09□□□□□ -0.95
NDUFA3-211ENST00000480713 SYNE4Q8N205 404 aa9.09□□□□□ -0.95
NDUFA3-211ENST00000480713 RSPH6AQ9H0K4 717 aa9.09□□□□□ -0.95
NDUFA3-211ENST00000480713 ZNF277Q9NRM2 450 aaPredicted RBP9.09□□□□□ -0.95
NDUFA3-211ENST00000480713 HACL1Q9UJ83 578 aa9.09□□□□□ -0.95
NDUFA3-211ENST00000480713 ZNF652Q9Y2D9 606 aa9.09□□□□□ -0.95
NDUFA3-211ENST00000480713 NPC1L1Q9UHC9 1359 aa9.09□□□□□ -0.95
NDUFA3-211ENST00000480713 RASSF10A6NK89 507 aa9.08□□□□□ -0.96
NDUFA3-211ENST00000480713 NBPF26B4DH59 902 aa9.08□□□□□ -0.96
NDUFA3-211ENST00000480713 PRKAR2BP31323 418 aa9.08□□□□□ -0.96
NDUFA3-211ENST00000480713 EPHX2P34913 555 aa9.08□□□□□ -0.96
NDUFA3-211ENST00000480713 DEFB115Q30KQ5 88 aa9.08□□□□□ -0.96
NDUFA3-211ENST00000480713 EAPPQ56P03 285 aaPredicted RBP9.08□□□□□ -0.96
NDUFA3-211ENST00000480713 NBPF10Q6P3W6 841 aaKnown RBP9.08□□□□□ -0.96
NDUFA3-211ENST00000480713 NBPF15Q8N660 670 aa9.08□□□□□ -0.96
NDUFA3-211ENST00000480713 AIDAQ96BJ3 306 aa9.08□□□□□ -0.96
NDUFA3-211ENST00000480713 NIP7Q9Y221 180 aaKnown RBP eCLIP9.08□□□□□ -0.96
NDUFA3-211ENST00000480713 CLEC11AQ9Y240 323 aa9.08□□□□□ -0.96
NDUFA3-211ENST00000480713 DLEC1Q9Y238 1755 aa9.08□□□□□ -0.96
NDUFA3-211ENST00000480713 ZNF541Q9H0D2 1346 aa9.07□□□□□ -0.96
NDUFA3-211ENST00000480713 HTATSF1O43719 755 aaKnown RBP9.07□□□□□ -0.96
NDUFA3-211ENST00000480713 IARSP41252 1262 aaKnown RBP9.07□□□□□ -0.96
NDUFA3-211ENST00000480713 HLFQ16534 295 aa9.07□□□□□ -0.96
NDUFA3-211ENST00000480713 MAP1SQ66K74 1059 aaPredicted RBP9.07□□□□□ -0.96
NDUFA3-211ENST00000480713 GPC2Q8N158 579 aa9.07□□□□□ -0.96
NDUFA3-211ENST00000480713 PSMD1Q99460 953 aa9.07□□□□□ -0.96
NDUFA3-211ENST00000480713 UBR2Q8IWV8 1755 aa9.07□□□□□ -0.96
NDUFA3-211ENST00000480713 LBX1P52954 281 aa9.06□□□□□ -0.96
NDUFA3-211ENST00000480713 MAP2K1Q02750 393 aaPredicted RBP9.06□□□□□ -0.96
NDUFA3-211ENST00000480713 CRY2Q49AN0 593 aa9.06□□□□□ -0.96
NDUFA3-211ENST00000480713 MCM10Q7L590 875 aa9.06□□□□□ -0.96
NDUFA3-211ENST00000480713 CCER1Q8TC90 406 aaPredicted RBP9.06□□□□□ -0.96
NDUFA3-211ENST00000480713 RTF1Q92541 710 aaKnown RBP9.06□□□□□ -0.96
NDUFA3-211ENST00000480713 COL3A1P02461 1466 aaPredicted RBP9.06□□□□□ -0.96
NDUFA3-211ENST00000480713 FER1L6Q2WGJ9 1857 aa9.06□□□□□ -0.96
NDUFA3-211ENST00000480713 WDR33Q9C0J8 1336 aaKnown RBP9.05□□□□□ -0.96
NDUFA3-211ENST00000480713 SLX4Q8IY92 1834 aa9.05□□□□□ -0.96
NDUFA3-211ENST00000480713 ANKRD31Q8N7Z5 1873 aa9.05□□□□□ -0.96
NDUFA3-211ENST00000480713 FAM177BA6PVY3 158 aa9.05□□□□□ -0.96
NDUFA3-211ENST00000480713 ERVV-1B6SEH8 477 aa9.05□□□□□ -0.96
NDUFA3-211ENST00000480713 HSPA8P11142 646 aaKnown RBP9.05□□□□□ -0.96
NDUFA3-211ENST00000480713 GTF2E1P29083 439 aaPredicted RBP9.05□□□□□ -0.96
NDUFA3-211ENST00000480713 HOXA10P31260 410 aaPredicted RBP9.05□□□□□ -0.96
NDUFA3-211ENST00000480713 CNGB1Q14028 1251 aaPredicted RBP9.05□□□□□ -0.96
NDUFA3-211ENST00000480713 TAF7Q15545 349 aaPredicted RBP9.05□□□□□ -0.96
NDUFA3-211ENST00000480713 GRIPAP1Q4V328 841 aa9.05□□□□□ -0.96
NDUFA3-211ENST00000480713 CC2D2BQ6DHV5 1058 aa9.05□□□□□ -0.96
NDUFA3-211ENST00000480713 JDP2Q8WYK2 163 aa9.05□□□□□ -0.96
NDUFA3-211ENST00000480713 DDX21Q9NR30 783 aaKnown RBP eCLIP9.05□□□□□ -0.96
NDUFA3-211ENST00000480713 NUDCQ9Y266 331 aa9.05□□□□□ -0.96
NDUFA3-211ENST00000480713 RNF123Q5XPI4 1314 aa9.05□□□□□ -0.96
NDUFA3-211ENST00000480713 DCTN1Q14203 1278 aa9.04□□□□□ -0.96
NDUFA3-211ENST00000480713 CFAP53Q96M91 514 aa9.04□□□□□ -0.96
NDUFA3-211ENST00000480713 MIS18AQ9NYP9 233 aa9.04□□□□□ -0.96
NDUFA3-211ENST00000480713 TIAM2Q8IVF5 1701 aa9.04□□□□□ -0.96
NDUFA3-211ENST00000480713 CCDC88AQ3V6T2 1871 aa9.03□□□□□ -0.96
NDUFA3-211ENST00000480713 U2AF1L5P0DN76 240 aaPredicted RBP9.03□□□□□ -0.96
NDUFA3-211ENST00000480713 EPS15P42566 896 aa9.03□□□□□ -0.96
NDUFA3-211ENST00000480713 SCNN1DP51172 638 aa9.03□□□□□ -0.96
NDUFA3-211ENST00000480713 EIF6P56537 245 aaKnown RBP9.03□□□□□ -0.96
NDUFA3-211ENST00000480713 U2AF1Q01081 240 aaKnown RBP eCLIP9.03□□□□□ -0.96
NDUFA3-211ENST00000480713 CST9Q5W186 159 aa9.03□□□□□ -0.96
NDUFA3-211ENST00000480713 USP50Q70EL3 339 aaPredicted RBP9.03□□□□□ -0.96
NDUFA3-211ENST00000480713 ABHD8Q96I13 439 aa9.03□□□□□ -0.96
NDUFA3-211ENST00000480713 NYXQ9GZU5 481 aa9.03□□□□□ -0.96
NDUFA3-211ENST00000480713 SNED1Q8TER0 1413 aa9.03□□□□□ -0.96
NDUFA3-211ENST00000480713 COL11A2P13942 1736 aaPredicted RBP9.02□□□□□ -0.96
NDUFA3-211ENST00000480713 DICER1Q9UPY3 1922 aaKnown RBP9.02□□□□□ -0.97
NDUFA3-211ENST00000480713 SCN7AQ01118 1682 aa9.02□□□□□ -0.97
NDUFA3-211ENST00000480713 FMR1Q06787 632 aaKnown RBP eCLIP9.02□□□□□ -0.97
NDUFA3-211ENST00000480713 SUSD4Q5VX71 490 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms