RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 ANXA1P04083 346 aa13.95□□□□□ -0.18
ATG4B-219ENST00000479941 SCN7AQ01118 1682 aa13.95□□□□□ -0.18
ATG4B-219ENST00000479941 MAP3K15Q6ZN16 1313 aa13.94□□□□□ -0.18
ATG4B-219ENST00000479941 VAMP4O75379 141 aa13.94□□□□□ -0.18
ATG4B-219ENST00000479941 NFIXQ14938 502 aa13.94□□□□□ -0.18
ATG4B-219ENST00000479941 TTLL7Q6ZT98 887 aa13.94□□□□□ -0.18
ATG4B-219ENST00000479941 COPS6Q7L5N1 327 aa13.94□□□□□ -0.18
ATG4B-219ENST00000479941 XAGE3Q8WTP9 111 aa13.94□□□□□ -0.18
ATG4B-219ENST00000479941 STK31Q9BXU1 1019 aa13.94□□□□□ -0.18
ATG4B-219ENST00000479941 POLRMTO00411 1230 aaKnown RBP13.93□□□□□ -0.18
ATG4B-219ENST00000479941 DDR1Q08345 913 aa13.93□□□□□ -0.18
ATG4B-219ENST00000479941 AIMP1Q12904 312 aaKnown RBP13.93□□□□□ -0.18
ATG4B-219ENST00000479941 TBC1D9BQ66K14 1250 aa13.93□□□□□ -0.18
ATG4B-219ENST00000479941 TRMT2AQ8IZ69 625 aaKnown RBP13.93□□□□□ -0.18
ATG4B-219ENST00000479941 CDCA7LQ96GN5 454 aa13.93□□□□□ -0.18
ATG4B-219ENST00000479941 FHDC1Q9C0D6 1143 aaPredicted RBP13.93□□□□□ -0.18
ATG4B-219ENST00000479941 BCORQ6W2J9 1755 aa13.92□□□□□ -0.18
ATG4B-219ENST00000479941 HLFQ16534 295 aa13.92□□□□□ -0.18
ATG4B-219ENST00000479941 GIGYF2Q6Y7W6 1299 aaKnown RBP13.92□□□□□ -0.18
ATG4B-219ENST00000479941 BICDL1Q6ZP65 573 aa13.92□□□□□ -0.18
ATG4B-219ENST00000479941 SETDB2Q96T68 719 aa13.92□□□□□ -0.18
ATG4B-219ENST00000479941 SYT17Q9BSW7 474 aa13.92□□□□□ -0.18
ATG4B-219ENST00000479941 ZBTB3Q9H5J0 574 aa13.92□□□□□ -0.18
ATG4B-219ENST00000479941 CD2APQ9Y5K6 639 aa13.92□□□□□ -0.18
ATG4B-219ENST00000479941 CARMIL3Q8ND23 1372 aa13.92□□□□□ -0.18
ATG4B-219ENST00000479941 SERPINB2P05120 415 aa13.91□□□□□ -0.18
ATG4B-219ENST00000479941 ANKRD13DQ6ZTN6 518 aa13.91□□□□□ -0.18
ATG4B-219ENST00000479941 KLHL34Q8N239 644 aa13.91□□□□□ -0.18
ATG4B-219ENST00000479941 ZBED9Q6R2W3 1325 aa13.9□□□□□ -0.18
ATG4B-219ENST00000479941 SLC4A2P04920 1241 aa13.9□□□□□ -0.18
ATG4B-219ENST00000479941 HSP90AB3PQ58FF7 597 aa13.9□□□□□ -0.18
ATG4B-219ENST00000479941 PLBD2Q8NHP8 589 aa13.9□□□□□ -0.18
ATG4B-219ENST00000479941 ZNF428Q96B54 188 aa13.9□□□□□ -0.18
ATG4B-219ENST00000479941 PHAXQ9H814 394 aaKnown RBP13.9□□□□□ -0.18
ATG4B-219ENST00000479941 NIP7Q9Y221 180 aaKnown RBP eCLIP13.9□□□□□ -0.18
ATG4B-219ENST00000479941 GOLGB1Q14789 3259 aaKnown RBP13.9□□□□□ -0.18
ATG4B-219ENST00000479941 ATP10DQ9P241 1426 aa13.9□□□□□ -0.19
ATG4B-219ENST00000479941 DDX58O95786 925 aaKnown RBP13.89□□□□□ -0.19
ATG4B-219ENST00000479941 CT47B1P0C2W7 299 aaPredicted RBP13.89□□□□□ -0.19
ATG4B-219ENST00000479941 TCERG1O14776 1098 aaKnown RBP13.88□□□□□ -0.19
ATG4B-219ENST00000479941 ZNF34Q8IZ26 560 aa13.88□□□□□ -0.19
ATG4B-219ENST00000479941 C10orf71Q711Q0 1435 aa13.88□□□□□ -0.19
ATG4B-219ENST00000479941 UTRNP46939 3433 aa13.87□□□□□ -0.19
ATG4B-219ENST00000479941 TGFB2P61812 414 aa13.87□□□□□ -0.19
ATG4B-219ENST00000479941 TCIRG1Q13488 830 aa13.87□□□□□ -0.19
ATG4B-219ENST00000479941 PARP10Q53GL7 1025 aa13.87□□□□□ -0.19
ATG4B-219ENST00000479941 TPTE2Q6XPS3 522 aa13.87□□□□□ -0.19
ATG4B-219ENST00000479941 RIC3Q7Z5B4 369 aa13.87□□□□□ -0.19
ATG4B-219ENST00000479941 NBPF5PQ86XG9 351 aaPredicted RBP13.87□□□□□ -0.19
ATG4B-219ENST00000479941 CNBD1Q8NA66 436 aa13.87□□□□□ -0.19
ATG4B-219ENST00000479941 NUP98P52948 1817 aa13.87□□□□□ -0.19
ATG4B-219ENST00000479941 NPHP1O15259 732 aa13.86□□□□□ -0.19
ATG4B-219ENST00000479941 FLIIQ13045 1269 aa13.86□□□□□ -0.19
ATG4B-219ENST00000479941 PRR5LQ6MZQ0 368 aa13.86□□□□□ -0.19
ATG4B-219ENST00000479941 KSR2Q6VAB6 950 aa13.86□□□□□ -0.19
ATG4B-219ENST00000479941 NYXQ9GZU5 481 aa13.86□□□□□ -0.19
ATG4B-219ENST00000479941 NRXN2Q9P2S2 1712 aa13.86□□□□□ -0.19
ATG4B-219ENST00000479941 CACNA1FO60840 1977 aa13.85□□□□□ -0.19
ATG4B-219ENST00000479941 GPTP24298 496 aa13.85□□□□□ -0.19
ATG4B-219ENST00000479941 ST5P78524 1137 aa13.85□□□□□ -0.19
ATG4B-219ENST00000479941 G2E3Q7L622 706 aa13.85□□□□□ -0.19
ATG4B-219ENST00000479941 NLGN2Q8NFZ4 835 aa13.85□□□□□ -0.19
ATG4B-219ENST00000479941 UBN2Q6ZU65 1347 aa13.85□□□□□ -0.19
ATG4B-219ENST00000479941 AFDNP55196 1824 aaKnown RBP13.85□□□□□ -0.19
ATG4B-219ENST00000479941 IBTKQ9P2D0 1353 aaPredicted RBP13.84□□□□□ -0.19
ATG4B-219ENST00000479941 PI4KAP2A4QPH2 592 aa13.84□□□□□ -0.19
ATG4B-219ENST00000479941 GTF2E1P29083 439 aaPredicted RBP13.84□□□□□ -0.19
ATG4B-219ENST00000479941 ALDH1L2Q3SY69 923 aa13.84□□□□□ -0.19
ATG4B-219ENST00000479941 PPP1R42Q7Z4L9 355 aa13.84□□□□□ -0.19
ATG4B-219ENST00000479941 PI4KAP1Q8N8J0 262 aa13.84□□□□□ -0.19
ATG4B-219ENST00000479941 ISCA1Q9BUE6 129 aa13.84□□□□□ -0.19
ATG4B-219ENST00000479941 BRIP1Q9BX63 1249 aa13.84□□□□□ -0.19
ATG4B-219ENST00000479941 PDZRN3Q9UPQ7 1066 aa13.84□□□□□ -0.19
ATG4B-219ENST00000479941 KIF13BQ9NQT8 1826 aa13.84□□□□□ -0.19
ATG4B-219ENST00000479941 DCAF8L1A6NGE4 600 aa13.83□□□□□ -0.2
ATG4B-219ENST00000479941 FAM177BA6PVY3 158 aa13.83□□□□□ -0.2
ATG4B-219ENST00000479941 PDE6BP35913 854 aa13.83□□□□□ -0.2
ATG4B-219ENST00000479941 TRIM28Q13263 835 aaKnown RBP13.83□□□□□ -0.2
ATG4B-219ENST00000479941 FKBP5Q13451 457 aaPredicted RBP13.83□□□□□ -0.2
ATG4B-219ENST00000479941 SUSD4Q5VX71 490 aa13.83□□□□□ -0.2
ATG4B-219ENST00000479941 NLRP10Q86W26 655 aa13.83□□□□□ -0.2
ATG4B-219ENST00000479941 METTL22Q9BUU2 404 aaPredicted RBP13.83□□□□□ -0.2
ATG4B-219ENST00000479941 UTP14AQ9BVJ6 771 aaKnown RBP13.83□□□□□ -0.2
ATG4B-219ENST00000479941 MAP3K2Q9Y2U5 619 aa13.83□□□□□ -0.2
ATG4B-219ENST00000479941 RNF123Q5XPI4 1314 aa13.83□□□□□ -0.2
ATG4B-219ENST00000479941 PXDNLA1KZ92 1463 aa13.82□□□□□ -0.2
ATG4B-219ENST00000479941 NTSR2O95665 410 aa13.82□□□□□ -0.2
ATG4B-219ENST00000479941 MRPL50Q8N5N7 158 aaKnown RBP13.82□□□□□ -0.2
ATG4B-219ENST00000479941 SSH1Q8WYL5 1049 aa13.82□□□□□ -0.2
ATG4B-219ENST00000479941 MYD88Q99836 296 aa13.82□□□□□ -0.2
ATG4B-219ENST00000479941 ADCY9O60503 1353 aa13.82□□□□□ -0.2
ATG4B-219ENST00000479941 A0A0G2JLW4 131 aa13.81□□□□□ -0.2
ATG4B-219ENST00000479941 ATP5J2-PTCD1G3V325 749 aa13.81□□□□□ -0.2
ATG4B-219ENST00000479941 DPEP1P16444 411 aa13.81□□□□□ -0.2
ATG4B-219ENST00000479941 NEXNQ0ZGT2 675 aa13.81□□□□□ -0.2
ATG4B-219ENST00000479941 CCDC24Q8N4L8 307 aa13.81□□□□□ -0.2
ATG4B-219ENST00000479941 TRMT112Q9UI30 125 aaKnown RBP13.81□□□□□ -0.2
ATG4B-219ENST00000479941 ANKRD36CQ5JPF3 1778 aa13.81□□□□□ -0.2
ATG4B-219ENST00000479941 ARFGEF2Q9Y6D5 1785 aa13.81□□□□□ -0.2
ATG4B-219ENST00000479941 H0YIN7 160 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms