RNA–Protein interactions for RNA: ENST00000479460.5

TRIM59-205, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-205ENST00000479460 NPHP1O15259 732 aa26.12■■□□□ 1.77
TRIM59-205ENST00000479460 NPM2Q86SE8 214 aaKnown RBP26.12■■□□□ 1.77
TRIM59-205ENST00000479460 GAS2L2Q8NHY3 880 aa26.12■■□□□ 1.77
TRIM59-205ENST00000479460 MASTLQ96GX5 879 aa26.12■■□□□ 1.77
TRIM59-205ENST00000479460 FMNL2Q96PY5 1086 aa26.12■■□□□ 1.77
TRIM59-205ENST00000479460 PCGF6Q9BYE7 350 aa26.12■■□□□ 1.77
TRIM59-205ENST00000479460 COL3A1P02461 1466 aaPredicted RBP26.11■■□□□ 1.77
TRIM59-205ENST00000479460 L3MBTL3Q96JM7 780 aaPredicted RBP26.11■■□□□ 1.77
TRIM59-205ENST00000479460 PASKQ96RG2 1323 aa26.11■■□□□ 1.77
TRIM59-205ENST00000479460 A1BGP04217 495 aa26.1■■□□□ 1.77
TRIM59-205ENST00000479460 LDHDQ86WU2 507 aa26.1■■□□□ 1.77
TRIM59-205ENST00000479460 FOXN1O15353 648 aa26.08■■□□□ 1.77
TRIM59-205ENST00000479460 KIF7Q2M1P5 1343 aa26.08■■□□□ 1.77
TRIM59-205ENST00000479460 CEMIPQ8WUJ3 1361 aa26.07■■□□□ 1.76
TRIM59-205ENST00000479460 PER1O15534 1290 aaPredicted RBP26.07■■□□□ 1.76
TRIM59-205ENST00000479460 DZIP3Q86Y13 1208 aaKnown RBP26.07■■□□□ 1.76
TRIM59-205ENST00000479460 C7orf43Q8WVR3 580 aa26.07■■□□□ 1.76
TRIM59-205ENST00000479460 TAF1DQ9H5J8 278 aaPredicted RBP26.07■■□□□ 1.76
TRIM59-205ENST00000479460 PRDM10Q9NQV6 1147 aa26.07■■□□□ 1.76
TRIM59-205ENST00000479460 CCDC93Q567U6 631 aa26.05■■□□□ 1.76
TRIM59-205ENST00000479460 CC2D1BQ5T0F9 858 aaKnown RBP26.05■■□□□ 1.76
TRIM59-205ENST00000479460 U2SURPO15042 1029 aaKnown RBP26.04■■□□□ 1.76
TRIM59-205ENST00000479460 CLEC4GQ6UXB4 293 aa26.04■■□□□ 1.76
TRIM59-205ENST00000479460 NBPF5PQ86XG9 351 aaPredicted RBP26.04■■□□□ 1.76
TRIM59-205ENST00000479460 ADAMTSL1Q8N6G6 1762 aa26.04■■□□□ 1.76
TRIM59-205ENST00000479460 TMEM88BA6NKF7 163 aa26.03■■□□□ 1.76
TRIM59-205ENST00000479460 BTBD11A6QL63 1104 aa26.02■■□□□ 1.76
TRIM59-205ENST00000479460 KCNQ3O43525 872 aa26.02■■□□□ 1.76
TRIM59-205ENST00000479460 ITGBL1O95965 494 aaPredicted RBP26.02■■□□□ 1.76
TRIM59-205ENST00000479460 NPR1P16066 1061 aa26.02■■□□□ 1.76
TRIM59-205ENST00000479460 FKBP4Q02790 459 aaKnown RBP eCLIP26.02■■□□□ 1.76
TRIM59-205ENST00000479460 AIDAQ96BJ3 306 aa26.02■■□□□ 1.76
TRIM59-205ENST00000479460 KLRG2A4D1S0 409 aaPredicted RBP26.01■■□□□ 1.75
TRIM59-205ENST00000479460 CTCFP49711 727 aaPredicted RBP26.01■■□□□ 1.75
TRIM59-205ENST00000479460 VEGFBP49765 207 aa26.01■■□□□ 1.75
TRIM59-205ENST00000479460 ZNF652Q9Y2D9 606 aa26.01■■□□□ 1.75
TRIM59-205ENST00000479460 USP16Q9Y5T5 823 aa26.01■■□□□ 1.75
TRIM59-205ENST00000479460 ZNF541Q9H0D2 1346 aa26■■□□□ 1.75
TRIM59-205ENST00000479460 HACL1Q9UJ83 578 aa26■■□□□ 1.75
TRIM59-205ENST00000479460 NPC1L1Q9UHC9 1359 aa25.99■■□□□ 1.75
TRIM59-205ENST00000479460 EAPPQ56P03 285 aaPredicted RBP25.99■■□□□ 1.75
TRIM59-205ENST00000479460 RGL2O15211 777 aa25.98■■□□□ 1.75
TRIM59-205ENST00000479460 PIP4K2AP48426 406 aaPredicted RBP25.98■■□□□ 1.75
TRIM59-205ENST00000479460 ZNF277Q9NRM2 450 aaPredicted RBP25.98■■□□□ 1.75
TRIM59-205ENST00000479460 TPTE2Q6XPS3 522 aa25.97■■□□□ 1.75
TRIM59-205ENST00000479460 RTKN2Q8IZC4 609 aa25.97■■□□□ 1.75
TRIM59-205ENST00000479460 WBP1LQ9NX94 342 aa25.97■■□□□ 1.75
TRIM59-205ENST00000479460 EPHX2P34913 555 aa25.96■■□□□ 1.75
TRIM59-205ENST00000479460 PHACTR3Q96KR7 559 aa25.96■■□□□ 1.75
TRIM59-205ENST00000479460 CLEC11AQ9Y240 323 aa25.96■■□□□ 1.75
TRIM59-205ENST00000479460 PRAMEF22A3QJZ6 481 aa25.95■■□□□ 1.74
TRIM59-205ENST00000479460 SNRPA1P09661 255 aaKnown RBP25.95■■□□□ 1.74
TRIM59-205ENST00000479460 PNMA8AQ86V59 439 aaPredicted RBP25.95■■□□□ 1.74
TRIM59-205ENST00000479460 RASSF10A6NK89 507 aa25.94■■□□□ 1.74
TRIM59-205ENST00000479460 OLFM4Q6UX06 510 aa25.94■■□□□ 1.74
TRIM59-205ENST00000479460 NIP7Q9Y221 180 aaKnown RBP eCLIP25.94■■□□□ 1.74
TRIM59-205ENST00000479460 FZD9O00144 591 aa25.93■■□□□ 1.74
TRIM59-205ENST00000479460 PRKAR2BP31323 418 aa25.93■■□□□ 1.74
TRIM59-205ENST00000479460 IARSP41252 1262 aaKnown RBP25.93■■□□□ 1.74
TRIM59-205ENST00000479460 RSPH6AQ9H0K4 717 aa25.93■■□□□ 1.74
TRIM59-205ENST00000479460 RNF123Q5XPI4 1314 aa25.92■■□□□ 1.74
TRIM59-205ENST00000479460 ALDH1B1P30837 517 aa25.92■■□□□ 1.74
TRIM59-205ENST00000479460 LBX1P52954 281 aa25.92■■□□□ 1.74
TRIM59-205ENST00000479460 CNTROBQ8N137 903 aa25.92■■□□□ 1.74
TRIM59-205ENST00000479460 DEFB115Q30KQ5 88 aa25.91■■□□□ 1.74
TRIM59-205ENST00000479460 GPC2Q8N158 579 aa25.91■■□□□ 1.74
TRIM59-205ENST00000479460 SYNE4Q8N205 404 aa25.91■■□□□ 1.74
TRIM59-205ENST00000479460 SNED1Q8TER0 1413 aa25.9■■□□□ 1.74
TRIM59-205ENST00000479460 NBPF26B4DH59 902 aa25.9■■□□□ 1.74
TRIM59-205ENST00000479460 MAP1SQ66K74 1059 aaPredicted RBP25.9■■□□□ 1.74
TRIM59-205ENST00000479460 NBPF10Q6P3W6 841 aaKnown RBP25.9■■□□□ 1.74
TRIM59-205ENST00000479460 NBPF15Q8N660 670 aa25.9■■□□□ 1.74
TRIM59-205ENST00000479460 PSMD1Q99460 953 aa25.89■■□□□ 1.74
TRIM59-205ENST00000479460 LAMB4A4D0S4 1761 aa25.88■■□□□ 1.73
TRIM59-205ENST00000479460 FAM177BA6PVY3 158 aa25.87■■□□□ 1.73
TRIM59-205ENST00000479460 HSPA8P11142 646 aaKnown RBP25.87■■□□□ 1.73
TRIM59-205ENST00000479460 MAP2K1Q02750 393 aaPredicted RBP25.87■■□□□ 1.73
TRIM59-205ENST00000479460 CNGB1Q14028 1251 aaPredicted RBP25.87■■□□□ 1.73
TRIM59-205ENST00000479460 JDP2Q8WYK2 163 aa25.87■■□□□ 1.73
TRIM59-205ENST00000479460 RTF1Q92541 710 aaKnown RBP25.87■■□□□ 1.73
TRIM59-205ENST00000479460 WDR33Q9C0J8 1336 aaKnown RBP25.87■■□□□ 1.73
TRIM59-205ENST00000479460 THSD7BQ9C0I4 1608 aa25.86■■□□□ 1.73
TRIM59-205ENST00000479460 MCM10Q7L590 875 aa25.86■■□□□ 1.73
TRIM59-205ENST00000479460 CFAP53Q96M91 514 aa25.86■■□□□ 1.73
TRIM59-205ENST00000479460 GTF2E1P29083 439 aaPredicted RBP25.85■■□□□ 1.73
TRIM59-205ENST00000479460 HLFQ16534 295 aa25.85■■□□□ 1.73
TRIM59-205ENST00000479460 CRY2Q49AN0 593 aa25.85■■□□□ 1.73
TRIM59-205ENST00000479460 CCER1Q8TC90 406 aaPredicted RBP25.85■■□□□ 1.73
TRIM59-205ENST00000479460 NUP98P52948 1817 aa25.85■■□□□ 1.73
TRIM59-205ENST00000479460 LTBP1Q14766 1721 aa25.85■■□□□ 1.73
TRIM59-205ENST00000479460 CC2D2BQ6DHV5 1058 aa25.84■■□□□ 1.73
TRIM59-205ENST00000479460 ABT1Q9ULW3 272 aaKnown RBP25.84■■□□□ 1.73
TRIM59-205ENST00000479460 COL4A5P29400 1685 aa25.83■■□□□ 1.73
TRIM59-205ENST00000479460 EIF6P56537 245 aaKnown RBP25.83■■□□□ 1.73
TRIM59-205ENST00000479460 ABHD8Q96I13 439 aa25.83■■□□□ 1.73
TRIM59-205ENST00000479460 NYXQ9GZU5 481 aa25.83■■□□□ 1.73
TRIM59-205ENST00000479460 DDX21Q9NR30 783 aaKnown RBP eCLIP25.83■■□□□ 1.73
TRIM59-205ENST00000479460 NUDCQ9Y266 331 aa25.83■■□□□ 1.73
TRIM59-205ENST00000479460 TRPM7Q96QT4 1865 aa25.83■■□□□ 1.72
TRIM59-205ENST00000479460 ABCC12Q96J65 1359 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms