RNA–Protein interactions for RNA: ENST00000479365.5

SSR1-206, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-206ENST00000479365 NPDC1Q9NQX5 325 aaPredicted RBP10□□□□□ -0.81
SSR1-206ENST00000479365 PPP1R1BQ9UD71 204 aaPredicted RBP10□□□□□ -0.81
SSR1-206ENST00000479365 PCDH11XQ9BZA7 1347 aa10□□□□□ -0.81
SSR1-206ENST00000479365 PCDH11YQ9BZA8 1340 aa10□□□□□ -0.81
SSR1-206ENST00000479365 PKD1L3Q7Z443 1732 aa9.99□□□□□ -0.81
SSR1-206ENST00000479365 TOGARAM1Q9Y4F4 1720 aa9.99□□□□□ -0.81
SSR1-206ENST00000479365 EIF4A2Q14240 407 aaKnown RBP9.99□□□□□ -0.81
SSR1-206ENST00000479365 SLC27A3Q5K4L6 730 aa9.99□□□□□ -0.81
SSR1-206ENST00000479365 C1orf115Q9H7X2 142 aa9.99□□□□□ -0.81
SSR1-206ENST00000479365 MAP2P11137 1827 aaKnown RBP9.98□□□□□ -0.81
SSR1-206ENST00000479365 ARHGAP33O14559 1287 aa9.98□□□□□ -0.81
SSR1-206ENST00000479365 PTGDRQ13258 359 aa9.98□□□□□ -0.81
SSR1-206ENST00000479365 DMRTA1Q5VZB9 504 aa9.98□□□□□ -0.81
SSR1-206ENST00000479365 MTFR1LQ9H019 292 aa9.98□□□□□ -0.81
SSR1-206ENST00000479365 KIF7Q2M1P5 1343 aa9.98□□□□□ -0.81
SSR1-206ENST00000479365 PNPLA7Q6ZV29 1317 aa9.98□□□□□ -0.81
SSR1-206ENST00000479365 CCNL1Q9UK58 526 aaPredicted RBP9.97□□□□□ -0.81
SSR1-206ENST00000479365 TUBGCP6Q96RT7 1819 aa9.96□□□□□ -0.81
SSR1-206ENST00000479365 PPP1R3GB7ZBB8 358 aa9.96□□□□□ -0.82
SSR1-206ENST00000479365 PBX2P40425 430 aa9.96□□□□□ -0.82
SSR1-206ENST00000479365 MPRIPQ6WCQ1 1025 aa9.96□□□□□ -0.82
SSR1-206ENST00000479365 FHDC1Q9C0D6 1143 aaPredicted RBP9.96□□□□□ -0.82
SSR1-206ENST00000479365 IGSF1Q8N6C5 1336 aa9.96□□□□□ -0.82
SSR1-206ENST00000479365 PALLDQ8WX93 1383 aa9.96□□□□□ -0.82
SSR1-206ENST00000479365 KAT6BQ8WYB5 2073 aa9.95□□□□□ -0.82
SSR1-206ENST00000479365 FCHSD2O94868 740 aa9.95□□□□□ -0.82
SSR1-206ENST00000479365 PHKG2P15735 406 aa9.95□□□□□ -0.82
SSR1-206ENST00000479365 PIGBQ92521 554 aa9.95□□□□□ -0.82
SSR1-206ENST00000479365 TFCP2L1Q9NZI6 479 aa9.95□□□□□ -0.82
SSR1-206ENST00000479365 SPG7Q9UQ90 795 aa9.95□□□□□ -0.82
SSR1-206ENST00000479365 QSER1Q2KHR3 1735 aa9.95□□□□□ -0.82
SSR1-206ENST00000479365 PROX2Q3B8N5 592 aa9.94□□□□□ -0.82
SSR1-206ENST00000479365 MORC1Q86VD1 984 aa9.94□□□□□ -0.82
SSR1-206ENST00000479365 COL23A1Q86Y22 540 aaPredicted RBP9.94□□□□□ -0.82
SSR1-206ENST00000479365 AEBP1Q8IUX7 1158 aa9.94□□□□□ -0.82
SSR1-206ENST00000479365 CDAN1Q8IWY9 1227 aa9.94□□□□□ -0.82
SSR1-206ENST00000479365 SYT17Q9BSW7 474 aa9.94□□□□□ -0.82
SSR1-206ENST00000479365 COL24A1Q17RW2 1714 aa9.93□□□□□ -0.82
SSR1-206ENST00000479365 PER1O15534 1290 aaPredicted RBP9.93□□□□□ -0.82
SSR1-206ENST00000479365 FECHP22830 423 aa9.93□□□□□ -0.82
SSR1-206ENST00000479365 AMIGO3Q86WK7 504 aa9.93□□□□□ -0.82
SSR1-206ENST00000479365 KRTAP3-3Q9BYR6 98 aa9.93□□□□□ -0.82
SSR1-206ENST00000479365 KRTAP3-2Q9BYR7 98 aa9.93□□□□□ -0.82
SSR1-206ENST00000479365 FAM117AQ9C073 453 aa9.93□□□□□ -0.82
SSR1-206ENST00000479365 KNSTRNQ9Y448 316 aa9.93□□□□□ -0.82
SSR1-206ENST00000479365 ITGB4P16144 1822 aa9.93□□□□□ -0.82
SSR1-206ENST00000479365 C5P01031 1676 aa9.93□□□□□ -0.82
SSR1-206ENST00000479365 PADI6Q6TGC4 694 aa9.92□□□□□ -0.82
SSR1-206ENST00000479365 SMIM5Q71RC9 77 aa9.92□□□□□ -0.82
SSR1-206ENST00000479365 IFNL2Q8IZJ0 200 aa9.92□□□□□ -0.82
SSR1-206ENST00000479365 SLC16A10Q8TF71 515 aa9.92□□□□□ -0.82
SSR1-206ENST00000479365 ARID3AQ99856 593 aa9.92□□□□□ -0.82
SSR1-206ENST00000479365 MAP3K5Q99683 1374 aa9.91□□□□□ -0.82
SSR1-206ENST00000479365 PLEKHG2Q9H7P9 1386 aa9.91□□□□□ -0.82
SSR1-206ENST00000479365 GNPATO15228 680 aa9.91□□□□□ -0.82
SSR1-206ENST00000479365 IL13P35225 146 aa9.91□□□□□ -0.82
SSR1-206ENST00000479365 PRSS12P56730 875 aa9.91□□□□□ -0.82
SSR1-206ENST00000479365 LSM11P83369 360 aaKnown RBP eCLIP9.91□□□□□ -0.82
SSR1-206ENST00000479365 HIC1Q14526 733 aa9.91□□□□□ -0.82
SSR1-206ENST00000479365 CDCA7LQ96GN5 454 aa9.91□□□□□ -0.82
SSR1-206ENST00000479365 ZBED2Q9BTP6 218 aa9.91□□□□□ -0.82
SSR1-206ENST00000479365 ATG3Q9NT62 314 aa9.91□□□□□ -0.82
SSR1-206ENST00000479365 FAM198AQ9UFP1 575 aa9.91□□□□□ -0.82
SSR1-206ENST00000479365 ASAP1Q9ULH1 1129 aa9.91□□□□□ -0.82
SSR1-206ENST00000479365 KDM6AO15550 1401 aaPredicted RBP9.9□□□□□ -0.82
SSR1-206ENST00000479365 ITPK1Q13572 414 aa9.9□□□□□ -0.82
SSR1-206ENST00000479365 MSL1Q68DK7 614 aa9.9□□□□□ -0.82
SSR1-206ENST00000479365 LINC00116Q8NCU8 138 aa9.9□□□□□ -0.82
SSR1-206ENST00000479365 SMARCC1Q92922 1105 aaPredicted RBP9.9□□□□□ -0.82
SSR1-206ENST00000479365 TMOD3Q9NYL9 352 aa9.9□□□□□ -0.82
SSR1-206ENST00000479365 TSKSQ9UJT2 592 aa9.9□□□□□ -0.82
SSR1-206ENST00000479365 TAF1LQ8IZX4 1826 aa9.9□□□□□ -0.82
SSR1-206ENST00000479365 C4BP0C0L5 1744 aa9.9□□□□□ -0.83
SSR1-206ENST00000479365 KDRP35968 1356 aa9.89□□□□□ -0.83
SSR1-206ENST00000479365 LOC102724428A0A0B4J2F2 783 aa9.89□□□□□ -0.83
SSR1-206ENST00000479365 YY1P25490 414 aa9.89□□□□□ -0.83
SSR1-206ENST00000479365 MTHFSP49914 203 aa9.89□□□□□ -0.83
SSR1-206ENST00000479365 SIK1P57059 783 aa9.89□□□□□ -0.83
SSR1-206ENST00000479365 PLEKHO1Q53GL0 409 aaPredicted RBP9.89□□□□□ -0.83
SSR1-206ENST00000479365 CC2D1BQ5T0F9 858 aaKnown RBP9.89□□□□□ -0.83
SSR1-206ENST00000479365 SULT6B1Q6IMI4 303 aa9.89□□□□□ -0.83
SSR1-206ENST00000479365 ZNF530Q6P9A1 599 aaPredicted RBP9.89□□□□□ -0.83
SSR1-206ENST00000479365 ANKRD13DQ6ZTN6 518 aa9.89□□□□□ -0.83
SSR1-206ENST00000479365 SLC4A9Q96Q91 983 aa9.89□□□□□ -0.83
SSR1-206ENST00000479365 TRIM6-TRIM34B2RNG4 842 aa9.88□□□□□ -0.83
SSR1-206ENST00000479365 POLD1P28340 1107 aa9.88□□□□□ -0.83
SSR1-206ENST00000479365 NLGN2Q8NFZ4 835 aa9.88□□□□□ -0.83
SSR1-206ENST00000479365 VPS9D1Q9Y2B5 631 aa9.88□□□□□ -0.83
SSR1-206ENST00000479365 ERVV-2B6SEH9 535 aa9.87□□□□□ -0.83
SSR1-206ENST00000479365 FAM161AQ3B820 660 aa9.87□□□□□ -0.83
SSR1-206ENST00000479365 AMOTQ4VCS5 1084 aa9.87□□□□□ -0.83
SSR1-206ENST00000479365 DDRGK1Q96HY6 314 aa9.87□□□□□ -0.83
SSR1-206ENST00000479365 DCAF5Q96JK2 942 aa9.87□□□□□ -0.83
SSR1-206ENST00000479365 COL3A1P02461 1466 aaPredicted RBP9.86□□□□□ -0.83
SSR1-206ENST00000479365 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.86□□□□□ -0.83
SSR1-206ENST00000479365 C3orf80F5H4A9 247 aa9.86□□□□□ -0.83
SSR1-206ENST00000479365 ATP6V1AP38606 617 aa9.86□□□□□ -0.83
SSR1-206ENST00000479365 FLIIQ13045 1269 aa9.86□□□□□ -0.83
SSR1-206ENST00000479365 CNGB1Q14028 1251 aaPredicted RBP9.86□□□□□ -0.83
SSR1-206ENST00000479365 ADGRD1Q6QNK2 874 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms