RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, human

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-222	ENST00000478095	DUSP27	Q5VZP5	1158 aa		13.33	□□□□□ -0.28
HDAC6-222	ENST00000478095	WDR63	Q8IWG1	891 aa		13.33	□□□□□ -0.28
HDAC6-222	ENST00000478095	PIP4P2	Q8N4L2	257 aa		13.33	□□□□□ -0.28
HDAC6-222	ENST00000478095	NARF	Q9UHQ1	456 aa		13.33	□□□□□ -0.28
HDAC6-222	ENST00000478095	PROSER3	Q2NL68	480 aa		13.32	□□□□□ -0.28
HDAC6-222	ENST00000478095	HDGFL1	Q5TGJ6	251 aa		13.32	□□□□□ -0.28
HDAC6-222	ENST00000478095	DZIP3	Q86Y13	1208 aa	Known RBP	13.32	□□□□□ -0.28
HDAC6-222	ENST00000478095	NLGN1	Q8N2Q7	840 aa		13.32	□□□□□ -0.28
HDAC6-222	ENST00000478095	C8orf58	Q8NAV2	365 aa		13.32	□□□□□ -0.28
HDAC6-222	ENST00000478095	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.32	□□□□□ -0.28
HDAC6-222	ENST00000478095	BCL2L12	Q9HB09	334 aa		13.32	□□□□□ -0.28
HDAC6-222	ENST00000478095	IL16	Q14005	1332 aa		13.32	□□□□□ -0.28
HDAC6-222	ENST00000478095	FANCI	Q9NVI1	1328 aa		13.32	□□□□□ -0.28
HDAC6-222	ENST00000478095	CAMTA2	O94983	1202 aa		13.31	□□□□□ -0.28
HDAC6-222	ENST00000478095	PDIA6	Q15084	440 aa		13.31	□□□□□ -0.28
HDAC6-222	ENST00000478095	TSPYL6	Q8N831	410 aa		13.31	□□□□□ -0.28
HDAC6-222	ENST00000478095	ZNF521	Q96K83	1311 aa		13.31	□□□□□ -0.28
HDAC6-222	ENST00000478095	HOXB7	P09629	217 aa		13.3	□□□□□ -0.28
HDAC6-222	ENST00000478095	FXR2	P51116	673 aa	Known RBP eCLIP	13.3	□□□□□ -0.28
HDAC6-222	ENST00000478095	DDR1	Q08345	913 aa		13.3	□□□□□ -0.28
HDAC6-222	ENST00000478095	BICDL1	Q6ZP65	573 aa		13.3	□□□□□ -0.28
HDAC6-222	ENST00000478095	CHPF2	Q9P2E5	772 aa		13.3	□□□□□ -0.28
HDAC6-222	ENST00000478095	ERBB4	Q15303	1308 aa		13.3	□□□□□ -0.28
HDAC6-222	ENST00000478095	C4A	P0C0L4	1744 aa		13.3	□□□□□ -0.28
HDAC6-222	ENST00000478095	NFIX	Q14938	502 aa		13.29	□□□□□ -0.28
HDAC6-222	ENST00000478095	TTLL7	Q6ZT98	887 aa		13.29	□□□□□ -0.28
HDAC6-222	ENST00000478095	LAMB4	A4D0S4	1761 aa		13.28	□□□□□ -0.28
HDAC6-222	ENST00000478095	TBC1D9B	Q66K14	1250 aa		13.28	□□□□□ -0.28
HDAC6-222	ENST00000478095	LRP10	Q7Z4F1	713 aa		13.28	□□□□□ -0.28
HDAC6-222	ENST00000478095	SYT17	Q9BSW7	474 aa		13.28	□□□□□ -0.28
HDAC6-222	ENST00000478095	ZBTB3	Q9H5J0	574 aa		13.28	□□□□□ -0.28
HDAC6-222	ENST00000478095	PARP3	Q9Y6F1	533 aa		13.28	□□□□□ -0.28
HDAC6-222	ENST00000478095	POLRMT	O00411	1230 aa	Known RBP	13.27	□□□□□ -0.29
HDAC6-222	ENST00000478095	TCERG1	O14776	1098 aa	Known RBP	13.27	□□□□□ -0.29
HDAC6-222	ENST00000478095	TM4SF1	P30408	202 aa		13.27	□□□□□ -0.29
HDAC6-222	ENST00000478095	EXOSC9	Q06265	439 aa	Known RBP	13.27	□□□□□ -0.29
HDAC6-222	ENST00000478095	GOLGA2	Q08379	1002 aa		13.27	□□□□□ -0.29
HDAC6-222	ENST00000478095	AIMP1	Q12904	312 aa	Known RBP	13.27	□□□□□ -0.29
HDAC6-222	ENST00000478095	HLF	Q16534	295 aa		13.27	□□□□□ -0.29
HDAC6-222	ENST00000478095	TWISTNB	Q3B726	338 aa	Predicted RBP	13.27	□□□□□ -0.29
HDAC6-222	ENST00000478095	KIF6	Q6ZMV9	814 aa		13.27	□□□□□ -0.29
HDAC6-222	ENST00000478095	NLGN2	Q8NFZ4	835 aa		13.27	□□□□□ -0.29
HDAC6-222	ENST00000478095	MYH16	Q9H6N6	1097 aa		13.27	□□□□□ -0.29
HDAC6-222	ENST00000478095	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.27	□□□□□ -0.29
HDAC6-222	ENST00000478095	XAGE3	Q8WTP9	111 aa		13.26	□□□□□ -0.29
HDAC6-222	ENST00000478095	DBF4	Q9UBU7	674 aa	Predicted RBP	13.26	□□□□□ -0.29
HDAC6-222	ENST00000478095	MAP3K15	Q6ZN16	1313 aa		13.25	□□□□□ -0.29
HDAC6-222	ENST00000478095	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.25	□□□□□ -0.29
HDAC6-222	ENST00000478095	COPS6	Q7L5N1	327 aa		13.25	□□□□□ -0.29
HDAC6-222	ENST00000478095	CDCA7L	Q96GN5	454 aa		13.25	□□□□□ -0.29
HDAC6-222	ENST00000478095	ZNF652	Q9Y2D9	606 aa		13.25	□□□□□ -0.29
HDAC6-222	ENST00000478095	COL24A1	Q17RW2	1714 aa		13.25	□□□□□ -0.29
HDAC6-222	ENST00000478095	SERPINB2	P05120	415 aa		13.24	□□□□□ -0.29
HDAC6-222	ENST00000478095	CCDC30	Q5VVM6	783 aa		13.24	□□□□□ -0.29
HDAC6-222	ENST00000478095	WWC3	Q9ULE0	1092 aa		13.24	□□□□□ -0.29
HDAC6-222	ENST00000478095	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
HDAC6-222	ENST00000478095	SCN7A	Q01118	1682 aa		13.24	□□□□□ -0.29
HDAC6-222	ENST00000478095	C10orf71	Q711Q0	1435 aa		13.23	□□□□□ -0.29
HDAC6-222	ENST00000478095	CARMIL3	Q8ND23	1372 aa		13.23	□□□□□ -0.29
HDAC6-222	ENST00000478095	FAM177B	A6PVY3	158 aa		13.23	□□□□□ -0.29
HDAC6-222	ENST00000478095		E9PSI1	815 aa		13.23	□□□□□ -0.29
HDAC6-222	ENST00000478095	GPT	P24298	496 aa		13.23	□□□□□ -0.29
HDAC6-222	ENST00000478095	CLEC4G	Q6UXB4	293 aa		13.23	□□□□□ -0.29
HDAC6-222	ENST00000478095	CCDC24	Q8N4L8	307 aa		13.23	□□□□□ -0.29
HDAC6-222	ENST00000478095	SETDB2	Q96T68	719 aa		13.23	□□□□□ -0.29
HDAC6-222	ENST00000478095	PHAX	Q9H814	394 aa	Known RBP	13.23	□□□□□ -0.29
HDAC6-222	ENST00000478095	CD2AP	Q9Y5K6	639 aa		13.23	□□□□□ -0.29
HDAC6-222	ENST00000478095	ERVV-1	B6SEH8	477 aa		13.22	□□□□□ -0.29
HDAC6-222	ENST00000478095	VAMP4	O75379	141 aa		13.22	□□□□□ -0.29
HDAC6-222	ENST00000478095	SLFN5	Q08AF3	891 aa		13.22	□□□□□ -0.29
HDAC6-222	ENST00000478095	STK31	Q9BXU1	1019 aa		13.22	□□□□□ -0.29
HDAC6-222	ENST00000478095	HYPK	Q9NX55	129 aa		13.22	□□□□□ -0.29
HDAC6-222	ENST00000478095	NPHP1	O15259	732 aa		13.21	□□□□□ -0.29
HDAC6-222	ENST00000478095	PRKAR2A	P13861	404 aa	Known RBP	13.21	□□□□□ -0.29
HDAC6-222	ENST00000478095	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.21	□□□□□ -0.29
HDAC6-222	ENST00000478095	PELP1	Q8IZL8	1130 aa	Known RBP	13.21	□□□□□ -0.29
HDAC6-222	ENST00000478095	UBN2	Q6ZU65	1347 aa		13.2	□□□□□ -0.3
HDAC6-222	ENST00000478095	PRR5L	Q6MZQ0	368 aa		13.2	□□□□□ -0.3
HDAC6-222	ENST00000478095	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.2	□□□□□ -0.3
HDAC6-222	ENST00000478095	CNBD1	Q8NA66	436 aa		13.2	□□□□□ -0.3
HDAC6-222	ENST00000478095	ZNF428	Q96B54	188 aa		13.2	□□□□□ -0.3
HDAC6-222	ENST00000478095	ATP10D	Q9P241	1426 aa		13.2	□□□□□ -0.3
HDAC6-222	ENST00000478095	BCOR	Q6W2J9	1755 aa		13.2	□□□□□ -0.3
HDAC6-222	ENST00000478095	PXDNL	A1KZ92	1463 aa		13.19	□□□□□ -0.3
HDAC6-222	ENST00000478095		A0A0G2JLW4	131 aa		13.19	□□□□□ -0.3
HDAC6-222	ENST00000478095	RGL2	O15211	777 aa		13.19	□□□□□ -0.3
HDAC6-222	ENST00000478095	DPEP1	P16444	411 aa		13.19	□□□□□ -0.3
HDAC6-222	ENST00000478095	ANKRD13D	Q6ZTN6	518 aa		13.19	□□□□□ -0.3
HDAC6-222	ENST00000478095	G2E3	Q7L622	706 aa		13.19	□□□□□ -0.3
HDAC6-222	ENST00000478095	PLBD2	Q8NHP8	589 aa		13.19	□□□□□ -0.3
HDAC6-222	ENST00000478095	CHMP4A	Q9BY43	222 aa		13.19	□□□□□ -0.3
HDAC6-222	ENST00000478095	CHRNA5	P30532	468 aa		13.18	□□□□□ -0.3
HDAC6-222	ENST00000478095	RIC3	Q7Z5B4	369 aa		13.18	□□□□□ -0.3
HDAC6-222	ENST00000478095	ZNF34	Q8IZ26	560 aa		13.18	□□□□□ -0.3
HDAC6-222	ENST00000478095	GTF2E1	P29083	439 aa	Predicted RBP	13.17	□□□□□ -0.3
HDAC6-222	ENST00000478095	TGFB2	P61812	414 aa		13.17	□□□□□ -0.3
HDAC6-222	ENST00000478095	ST5	P78524	1137 aa		13.17	□□□□□ -0.3
HDAC6-222	ENST00000478095	TCIRG1	Q13488	830 aa		13.17	□□□□□ -0.3
HDAC6-222	ENST00000478095	SUSD4	Q5VX71	490 aa		13.17	□□□□□ -0.3
HDAC6-222	ENST00000478095	NUTM1	Q86Y26	1132 aa		13.17	□□□□□ -0.3

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