RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 ELL2O00472 640 aaPredicted RBP18.24■□□□□ 0.51
CLSTN1-205ENST00000477264 FAM193AP78312 1265 aa18.24■□□□□ 0.51
CLSTN1-205ENST00000477264 ARHGEF25Q86VW2 580 aa18.24■□□□□ 0.51
CLSTN1-205ENST00000477264 LTV1Q96GA3 475 aaPredicted RBP18.24■□□□□ 0.51
CLSTN1-205ENST00000477264 SPDYE4A6NLX3 237 aa18.23■□□□□ 0.51
CLSTN1-205ENST00000477264 GDPD2Q9HCC8 539 aa18.23■□□□□ 0.51
CLSTN1-205ENST00000477264 PYCARDQ9ULZ3 195 aa18.23■□□□□ 0.51
CLSTN1-205ENST00000477264 LTBP4Q8N2S1 1624 aa18.23■□□□□ 0.51
CLSTN1-205ENST00000477264 IGSF1Q8N6C5 1336 aa18.23■□□□□ 0.51
CLSTN1-205ENST00000477264 ZNF771Q7L3S4 317 aaPredicted RBP18.23■□□□□ 0.51
CLSTN1-205ENST00000477264 EYA1Q99502 592 aa18.23■□□□□ 0.51
CLSTN1-205ENST00000477264 MED1Q15648 1581 aaPredicted RBP18.22■□□□□ 0.51
CLSTN1-205ENST00000477264 SOS2Q07890 1332 aaPredicted RBP18.22■□□□□ 0.51
CLSTN1-205ENST00000477264 NCBP1Q09161 790 aaKnown RBP18.22■□□□□ 0.51
CLSTN1-205ENST00000477264 CREBRFQ8IUR6 639 aa18.22■□□□□ 0.51
CLSTN1-205ENST00000477264 CCDC66A2RUB6 948 aa18.21■□□□□ 0.51
CLSTN1-205ENST00000477264 CCDC192P0DO97 292 aa18.21■□□□□ 0.51
CLSTN1-205ENST00000477264 PALD1Q9ULE6 856 aa18.21■□□□□ 0.51
CLSTN1-205ENST00000477264 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.21■□□□□ 0.51
CLSTN1-205ENST00000477264 PAXBP1Q9Y5B6 917 aa18.21■□□□□ 0.51
CLSTN1-205ENST00000477264 CHMLP26374 656 aa18.21■□□□□ 0.51
CLSTN1-205ENST00000477264 ANO2Q9NQ90 1003 aa18.21■□□□□ 0.51
CLSTN1-205ENST00000477264 CTNNA3Q9UI47 895 aa18.21■□□□□ 0.51
CLSTN1-205ENST00000477264 KDRP35968 1356 aa18.2■□□□□ 0.5
CLSTN1-205ENST00000477264 ZC3H6P61129 1189 aaKnown RBP18.2■□□□□ 0.5
CLSTN1-205ENST00000477264 DDX41Q9UJV9 622 aaKnown RBP18.2■□□□□ 0.5
CLSTN1-205ENST00000477264 CNPY2Q9Y2B0 182 aa18.2■□□□□ 0.5
CLSTN1-205ENST00000477264 FAM177BA6PVY3 158 aa18.2■□□□□ 0.5
CLSTN1-205ENST00000477264 F13A1P00488 732 aa18.2■□□□□ 0.5
CLSTN1-205ENST00000477264 MPNDQ8N594 471 aa18.2■□□□□ 0.5
CLSTN1-205ENST00000477264 BBXQ8WY36 941 aaPredicted RBP18.2■□□□□ 0.5
CLSTN1-205ENST00000477264 NHSL1Q5SYE7 1610 aa18.2■□□□□ 0.5
CLSTN1-205ENST00000477264 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.19■□□□□ 0.5
CLSTN1-205ENST00000477264 MEIS3Q99687 375 aa18.19■□□□□ 0.5
CLSTN1-205ENST00000477264 STX6O43752 255 aa18.18■□□□□ 0.5
CLSTN1-205ENST00000477264 PDIA4P13667 645 aaKnown RBP18.18■□□□□ 0.5
CLSTN1-205ENST00000477264 FAM200AQ8TCP9 573 aa18.18■□□□□ 0.5
CLSTN1-205ENST00000477264 CABLES1Q8TDN4 633 aa18.18■□□□□ 0.5
CLSTN1-205ENST00000477264 STAP2Q9UGK3 403 aa18.18■□□□□ 0.5
CLSTN1-205ENST00000477264 MORC2Q9Y6X9 1032 aaPredicted RBP18.18■□□□□ 0.5
CLSTN1-205ENST00000477264 CACNA1FO60840 1977 aa18.18■□□□□ 0.5
CLSTN1-205ENST00000477264 APBB1O00213 710 aa18.18■□□□□ 0.5
CLSTN1-205ENST00000477264 GTF2E1P29083 439 aaPredicted RBP18.18■□□□□ 0.5
CLSTN1-205ENST00000477264 HSPA4P34932 840 aa18.18■□□□□ 0.5
CLSTN1-205ENST00000477264 CCT4P50991 539 aaKnown RBP18.18■□□□□ 0.5
CLSTN1-205ENST00000477264 NOL8Q76FK4 1167 aaKnown RBP18.17■□□□□ 0.5
CLSTN1-205ENST00000477264 LRRCC1Q9C099 1032 aa18.17■□□□□ 0.5
CLSTN1-205ENST00000477264 CRYBG1Q9Y4K1 1723 aa18.16■□□□□ 0.5
CLSTN1-205ENST00000477264 PLCB2Q00722 1185 aa18.15■□□□□ 0.5
CLSTN1-205ENST00000477264 ROBO1Q9Y6N7 1651 aa18.15■□□□□ 0.5
CLSTN1-205ENST00000477264 ANKRD24Q8TF21 1146 aa18.15■□□□□ 0.5
CLSTN1-205ENST00000477264 CCDC171Q6TFL3 1326 aa18.15■□□□□ 0.5
CLSTN1-205ENST00000477264 RGPD5Q99666 1765 aa18.14■□□□□ 0.5
CLSTN1-205ENST00000477264 AP5Z1O43299 807 aa18.14■□□□□ 0.49
CLSTN1-205ENST00000477264 FOXD4L6Q3SYB3 417 aaPredicted RBP18.14■□□□□ 0.49
CLSTN1-205ENST00000477264 GIMAP6Q6P9H5 292 aa18.14■□□□□ 0.49
CLSTN1-205ENST00000477264 FOXD4L3Q6VB84 417 aaPredicted RBP18.14■□□□□ 0.49
CLSTN1-205ENST00000477264 KRT222Q8N1A0 295 aa18.14■□□□□ 0.49
CLSTN1-205ENST00000477264 CCDC112Q8NEF3 446 aa18.14■□□□□ 0.49
CLSTN1-205ENST00000477264 UPF3BQ9BZI7 483 aaKnown RBP18.14■□□□□ 0.49
CLSTN1-205ENST00000477264 SMC3Q9UQE7 1217 aa18.14■□□□□ 0.49
CLSTN1-205ENST00000477264 RAD50Q92878 1312 aa18.14■□□□□ 0.49
CLSTN1-205ENST00000477264 FAM208AQ9UK61 1670 aaKnown RBP18.14■□□□□ 0.49
CLSTN1-205ENST00000477264 SYT1P21579 422 aa18.14■□□□□ 0.49
CLSTN1-205ENST00000477264 LIMCH1Q9UPQ0 1083 aa18.14■□□□□ 0.49
CLSTN1-205ENST00000477264 CHL1O00533 1208 aa18.13■□□□□ 0.49
CLSTN1-205ENST00000477264 FIBPO43427 364 aa18.13■□□□□ 0.49
CLSTN1-205ENST00000477264 GNAI2P04899 355 aa18.13■□□□□ 0.49
CLSTN1-205ENST00000477264 NBPF6Q5VWK0 638 aa18.13■□□□□ 0.49
CLSTN1-205ENST00000477264 USHBP1Q8N6Y0 703 aa18.13■□□□□ 0.49
CLSTN1-205ENST00000477264 NBPF4Q96M43 638 aa18.13■□□□□ 0.49
CLSTN1-205ENST00000477264 TTC14Q96N46 770 aa18.13■□□□□ 0.49
CLSTN1-205ENST00000477264 TMEM51Q9NW97 253 aa18.13■□□□□ 0.49
CLSTN1-205ENST00000477264 AXIN2Q9Y2T1 843 aa18.13■□□□□ 0.49
CLSTN1-205ENST00000477264 RGPD2P0DJD1 1756 aa18.13■□□□□ 0.49
CLSTN1-205ENST00000477264 SLFN14P0C7P3 912 aa18.13■□□□□ 0.49
CLSTN1-205ENST00000477264 PTGS1P23219 599 aa18.13■□□□□ 0.49
CLSTN1-205ENST00000477264 SPC24Q8NBT2 197 aa18.13■□□□□ 0.49
CLSTN1-205ENST00000477264 ZNF397Q8NF99 534 aaPredicted RBP18.13■□□□□ 0.49
CLSTN1-205ENST00000477264 TRIM6-TRIM34B2RNG4 842 aa18.12■□□□□ 0.49
CLSTN1-205ENST00000477264 KIF18AQ8NI77 898 aa18.12■□□□□ 0.49
CLSTN1-205ENST00000477264 RTF1Q92541 710 aaKnown RBP18.12■□□□□ 0.49
CLSTN1-205ENST00000477264 TNNT1P13805 278 aa18.11■□□□□ 0.49
CLSTN1-205ENST00000477264 SLC20A2Q08357 652 aa18.11■□□□□ 0.49
CLSTN1-205ENST00000477264 MAP3K11Q16584 847 aa18.11■□□□□ 0.49
CLSTN1-205ENST00000477264 MTHFSDQ2M296 383 aaKnown RBP18.11■□□□□ 0.49
CLSTN1-205ENST00000477264 RILPL2Q969X0 211 aa18.11■□□□□ 0.49
CLSTN1-205ENST00000477264 LRRC59Q96AG4 307 aaKnown RBP18.11■□□□□ 0.49
CLSTN1-205ENST00000477264 ELP1O95163 1332 aa18.11■□□□□ 0.49
CLSTN1-205ENST00000477264 CPDO75976 1380 aa18.11■□□□□ 0.49
CLSTN1-205ENST00000477264 ABCC6O95255 1503 aa18.11■□□□□ 0.49
CLSTN1-205ENST00000477264 CDC25BP30305 580 aa18.11■□□□□ 0.49
CLSTN1-205ENST00000477264 KRT24Q2M2I5 525 aa18.11■□□□□ 0.49
CLSTN1-205ENST00000477264 SLFNL1Q499Z3 407 aa18.11■□□□□ 0.49
CLSTN1-205ENST00000477264 PXDNLA1KZ92 1463 aa18.11■□□□□ 0.49
CLSTN1-205ENST00000477264 FAM83GA6ND36 823 aa18.1■□□□□ 0.49
CLSTN1-205ENST00000477264 NEMFO60524 1076 aa18.1■□□□□ 0.49
CLSTN1-205ENST00000477264 RNF20Q5VTR2 975 aa18.1■□□□□ 0.49
CLSTN1-205ENST00000477264 ERBB3P21860 1342 aa18.1■□□□□ 0.49
CLSTN1-205ENST00000477264 GNAI3P08754 354 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms