RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 HINFPQ9BQA5 517 aa3.77□□□□□ -1.81
HMGN4-202ENST00000477243 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.77□□□□□ -1.81
HMGN4-202ENST00000477243 SIRPGQ9P1W8 387 aa3.77□□□□□ -1.81
HMGN4-202ENST00000477243 FKBPLQ9UIM3 349 aa3.77□□□□□ -1.81
HMGN4-202ENST00000477243 CHIC2Q9UKJ5 165 aa3.77□□□□□ -1.81
HMGN4-202ENST00000477243 TRIM35Q9UPQ4 493 aa3.77□□□□□ -1.81
HMGN4-202ENST00000477243 GPSM3Q9Y4H4 160 aa3.77□□□□□ -1.81
HMGN4-202ENST00000477243 COMMD10Q9Y6G5 202 aa3.77□□□□□ -1.81
HMGN4-202ENST00000477243 SHANK3Q9BYB0 1731 aa3.76□□□□□ -1.81
HMGN4-202ENST00000477243 PSDA5PKW4 1024 aaPredicted RBP3.76□□□□□ -1.81
HMGN4-202ENST00000477243 NBPF26B4DH59 902 aa3.76□□□□□ -1.81
HMGN4-202ENST00000477243 ZBTB7BO15156 539 aaPredicted RBP3.76□□□□□ -1.81
HMGN4-202ENST00000477243 ZBTB24O43167 697 aaPredicted RBP3.76□□□□□ -1.81
HMGN4-202ENST00000477243 WDHD1O75717 1129 aaPredicted RBP3.76□□□□□ -1.81
HMGN4-202ENST00000477243 FGRP09769 529 aa3.76□□□□□ -1.81
HMGN4-202ENST00000477243 ATF4P18848 351 aaPredicted RBP3.76□□□□□ -1.81
HMGN4-202ENST00000477243 PAX3P23760 479 aa3.76□□□□□ -1.81
HMGN4-202ENST00000477243 FOXD4L6Q3SYB3 417 aaPredicted RBP3.76□□□□□ -1.81
HMGN4-202ENST00000477243 WDR78Q5VTH9 848 aa3.76□□□□□ -1.81
HMGN4-202ENST00000477243 CCDC102BQ68D86 513 aa3.76□□□□□ -1.81
HMGN4-202ENST00000477243 FAM117BQ6P1L5 589 aa3.76□□□□□ -1.81
HMGN4-202ENST00000477243 FOXD4L3Q6VB84 417 aaPredicted RBP3.76□□□□□ -1.81
HMGN4-202ENST00000477243 NUDT18Q6ZVK8 323 aa3.76□□□□□ -1.81
HMGN4-202ENST00000477243 HS2ST1Q7LGA3 356 aa3.76□□□□□ -1.81
HMGN4-202ENST00000477243 LRP10Q7Z4F1 713 aa3.76□□□□□ -1.81
HMGN4-202ENST00000477243 USP48Q86UV5 1035 aa3.76□□□□□ -1.81
HMGN4-202ENST00000477243 SGSM3Q96HU1 749 aa3.76□□□□□ -1.81
HMGN4-202ENST00000477243 NAP1L5Q96NT1 182 aaPredicted RBP3.76□□□□□ -1.81
HMGN4-202ENST00000477243 PHF12Q96QT6 1004 aa3.76□□□□□ -1.81
HMGN4-202ENST00000477243 SEPT3Q9UH03 358 aa3.76□□□□□ -1.81
HMGN4-202ENST00000477243 XIRP1Q702N8 1843 aaKnown RBP3.76□□□□□ -1.81
HMGN4-202ENST00000477243 KIF21BO75037 1637 aa3.76□□□□□ -1.81
HMGN4-202ENST00000477243 ERBB3P21860 1342 aa3.75□□□□□ -1.81
HMGN4-202ENST00000477243 DOPEY1Q5JWR5 2465 aa3.75□□□□□ -1.81
HMGN4-202ENST00000477243 DKK1O94907 266 aa3.75□□□□□ -1.81
HMGN4-202ENST00000477243 LIG1P18858 919 aa3.75□□□□□ -1.81
HMGN4-202ENST00000477243 WEE1P30291 646 aa3.75□□□□□ -1.81
HMGN4-202ENST00000477243 GNA15P30679 374 aa3.75□□□□□ -1.81
HMGN4-202ENST00000477243 GJA8P48165 433 aa3.75□□□□□ -1.81
HMGN4-202ENST00000477243 SLC4A3P48751 1232 aa3.75□□□□□ -1.81
HMGN4-202ENST00000477243 RACK1P63244 317 aaKnown RBP3.75□□□□□ -1.81
HMGN4-202ENST00000477243 PTPN12Q05209 780 aaKnown RBP3.75□□□□□ -1.81
HMGN4-202ENST00000477243 PTK2Q05397 1052 aa3.75□□□□□ -1.81
HMGN4-202ENST00000477243 KCNH2Q12809 1159 aa3.75□□□□□ -1.81
HMGN4-202ENST00000477243 AAMPQ13685 434 aa3.75□□□□□ -1.81
HMGN4-202ENST00000477243 UBE4AQ14139 1066 aa3.75□□□□□ -1.81
HMGN4-202ENST00000477243 SAFB2Q14151 953 aaKnown RBP eCLIP3.75□□□□□ -1.81
HMGN4-202ENST00000477243 HLTFQ14527 1009 aaKnown RBP eCLIP3.75□□□□□ -1.81
HMGN4-202ENST00000477243 ZRSR2Q15696 482 aaKnown RBP3.75□□□□□ -1.81
HMGN4-202ENST00000477243 ODR4Q5SWX8 454 aa3.75□□□□□ -1.81
HMGN4-202ENST00000477243 TRAF7Q6Q0C0 670 aa3.75□□□□□ -1.81
HMGN4-202ENST00000477243 LYPD8Q6UX82 237 aa3.75□□□□□ -1.81
HMGN4-202ENST00000477243 KRBA2Q6ZNG9 492 aa3.75□□□□□ -1.81
HMGN4-202ENST00000477243 FERMT3Q86UX7 667 aa3.75□□□□□ -1.81
HMGN4-202ENST00000477243 PACS2Q86VP3 889 aa3.75□□□□□ -1.81
HMGN4-202ENST00000477243 TMEFF1Q8IYR6 380 aa3.75□□□□□ -1.81
HMGN4-202ENST00000477243 TRPM4Q8TD43 1214 aa3.75□□□□□ -1.81
HMGN4-202ENST00000477243 STAG1Q8WVM7 1258 aa3.75□□□□□ -1.81
HMGN4-202ENST00000477243 ALKBH8Q96BT7 664 aaKnown RBP3.75□□□□□ -1.81
HMGN4-202ENST00000477243 CRELD1Q96HD1 420 aa3.75□□□□□ -1.81
HMGN4-202ENST00000477243 RNPC3Q96LT9 517 aaKnown RBP3.75□□□□□ -1.81
HMGN4-202ENST00000477243 SRPK1Q96SB4 655 aaKnown RBP3.75□□□□□ -1.81
HMGN4-202ENST00000477243 NAP1L4Q99733 375 aaKnown RBP3.75□□□□□ -1.81
HMGN4-202ENST00000477243 JADE2Q9NQC1 790 aa3.75□□□□□ -1.81
HMGN4-202ENST00000477243 GNL3LQ9NVN8 582 aaKnown RBP3.75□□□□□ -1.81
HMGN4-202ENST00000477243 PRR12Q9ULL5 1215 aa3.75□□□□□ -1.81
HMGN4-202ENST00000477243 TRPC6Q9Y210 931 aa3.75□□□□□ -1.81
HMGN4-202ENST00000477243 EMILIN1Q9Y6C2 1016 aa3.75□□□□□ -1.81
HMGN4-202ENST00000477243 AK5Q9Y6K8 562 aa3.75□□□□□ -1.81
HMGN4-202ENST00000477243 CARMIL2Q6F5E8 1435 aa3.75□□□□□ -1.81
HMGN4-202ENST00000477243 VWDEQ8N2E2 1590 aa3.75□□□□□ -1.81
HMGN4-202ENST00000477243 CUX1P39880 1505 aa3.75□□□□□ -1.81
HMGN4-202ENST00000477243 TOPBP1Q92547 1522 aa3.75□□□□□ -1.81
HMGN4-202ENST00000477243 CHD6Q8TD26 2715 aa3.74□□□□□ -1.81
HMGN4-202ENST00000477243 RTEL1-TNFRSF6BF6WH68 1400 aa3.74□□□□□ -1.81
HMGN4-202ENST00000477243 M0R2N6 131 aa3.74□□□□□ -1.81
HMGN4-202ENST00000477243 PER1O15534 1290 aaPredicted RBP3.74□□□□□ -1.81
HMGN4-202ENST00000477243 CAND2O75155 1236 aa3.74□□□□□ -1.81
HMGN4-202ENST00000477243 CDC45O75419 566 aa3.74□□□□□ -1.81
HMGN4-202ENST00000477243 SSBP05455 408 aaKnown RBP eCLIP3.74□□□□□ -1.81
HMGN4-202ENST00000477243 GTF2IP78347 998 aa3.74□□□□□ -1.81
HMGN4-202ENST00000477243 AMPD3Q01432 767 aa3.74□□□□□ -1.81
HMGN4-202ENST00000477243 GUCA2AQ02747 115 aa3.74□□□□□ -1.81
HMGN4-202ENST00000477243 SERINC3Q13530 473 aa3.74□□□□□ -1.81
HMGN4-202ENST00000477243 MTMR3Q13615 1198 aa3.74□□□□□ -1.81
HMGN4-202ENST00000477243 CLEC4GQ6UXB4 293 aa3.74□□□□□ -1.81
HMGN4-202ENST00000477243 RETREG3Q86VR2 466 aa3.74□□□□□ -1.81
HMGN4-202ENST00000477243 FBF1Q8TES7 1133 aa3.74□□□□□ -1.81
HMGN4-202ENST00000477243 APPBP2Q92624 585 aa3.74□□□□□ -1.81
HMGN4-202ENST00000477243 TATDN2Q93075 761 aa3.74□□□□□ -1.81
HMGN4-202ENST00000477243 EVI5LQ96CN4 794 aa3.74□□□□□ -1.81
HMGN4-202ENST00000477243 MS4A3Q96HJ5 214 aa3.74□□□□□ -1.81
HMGN4-202ENST00000477243 SEC16BQ96JE7 1060 aa3.74□□□□□ -1.81
HMGN4-202ENST00000477243 SENP7Q9BQF6 1050 aa3.74□□□□□ -1.81
HMGN4-202ENST00000477243 MKNK1Q9BUB5 465 aa3.74□□□□□ -1.81
HMGN4-202ENST00000477243 TRIM55Q9BYV6 548 aa3.74□□□□□ -1.81
HMGN4-202ENST00000477243 HOMER2Q9NSB8 354 aa3.74□□□□□ -1.81
HMGN4-202ENST00000477243 SWAP70Q9UH65 585 aa3.74□□□□□ -1.81
HMGN4-202ENST00000477243 RAPGEFL1Q9UHV5 662 aa3.74□□□□□ -1.81
HMGN4-202ENST00000477243 PNMA2Q9UL42 364 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms