RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 RNF40O75150 1001 aa9.42□□□□□ -0.9
LRCH3-215ENST00000476664 AAMPQ13685 434 aa9.42□□□□□ -0.9
LRCH3-215ENST00000476664 TCEAL1Q15170 157 aa9.42□□□□□ -0.9
LRCH3-215ENST00000476664 FAM98CQ17RN3 349 aaKnown RBP9.42□□□□□ -0.9
LRCH3-215ENST00000476664 PUS10Q3MIT2 529 aaKnown RBP9.42□□□□□ -0.9
LRCH3-215ENST00000476664 RNF19BQ6ZMZ0 732 aa9.42□□□□□ -0.9
LRCH3-215ENST00000476664 VTI1AQ96AJ9 217 aa9.42□□□□□ -0.9
LRCH3-215ENST00000476664 KCNK17Q96T54 332 aa9.42□□□□□ -0.9
LRCH3-215ENST00000476664 MYH16Q9H6N6 1097 aa9.42□□□□□ -0.9
LRCH3-215ENST00000476664 RABGEF1Q9UJ41 708 aa9.42□□□□□ -0.9
LRCH3-215ENST00000476664 RIPOR2Q9Y4F9 1068 aa9.42□□□□□ -0.9
LRCH3-215ENST00000476664 LRRC7Q96NW7 1537 aa9.41□□□□□ -0.9
LRCH3-215ENST00000476664 CCNYL3P0C7X3 344 aa9.41□□□□□ -0.9
LRCH3-215ENST00000476664 MRFAP1L1Q96HT8 127 aa9.41□□□□□ -0.9
LRCH3-215ENST00000476664 PURBQ96QR8 312 aaKnown RBP9.41□□□□□ -0.9
LRCH3-215ENST00000476664 ZBED2Q9BTP6 218 aa9.41□□□□□ -0.9
LRCH3-215ENST00000476664 PRR14Q9BWN1 585 aa9.41□□□□□ -0.9
LRCH3-215ENST00000476664 SEPT9Q9UHD8 586 aaPredicted RBP9.41□□□□□ -0.9
LRCH3-215ENST00000476664 ZNF142P52746 1687 aaPredicted RBP9.41□□□□□ -0.9
LRCH3-215ENST00000476664 CARMIL1Q5VZK9 1371 aa9.4□□□□□ -0.9
LRCH3-215ENST00000476664 GNA15P30679 374 aa9.4□□□□□ -0.9
LRCH3-215ENST00000476664 BMS1Q14692 1282 aaKnown RBP9.4□□□□□ -0.9
LRCH3-215ENST00000476664 SAMD7Q7Z3H4 446 aa9.4□□□□□ -0.9
LRCH3-215ENST00000476664 CRELD1Q96HD1 420 aa9.4□□□□□ -0.9
LRCH3-215ENST00000476664 FAM129BQ96TA1 746 aa9.4□□□□□ -0.9
LRCH3-215ENST00000476664 EVA1BQ9NVM1 165 aa9.4□□□□□ -0.9
LRCH3-215ENST00000476664 DDX41Q9UJV9 622 aaKnown RBP9.4□□□□□ -0.9
LRCH3-215ENST00000476664 SUGT1Q9Y2Z0 365 aa9.4□□□□□ -0.9
LRCH3-215ENST00000476664 EMILIN1Q9Y6C2 1016 aa9.4□□□□□ -0.9
LRCH3-215ENST00000476664 RNF17Q9BXT8 1623 aaKnown RBP9.39□□□□□ -0.91
LRCH3-215ENST00000476664 LOC102724159A0A0B4J2E5 919 aa9.39□□□□□ -0.91
LRCH3-215ENST00000476664 PWP2Q15269 919 aaKnown RBP9.39□□□□□ -0.91
LRCH3-215ENST00000476664 BRICD5Q6PL45 260 aa9.39□□□□□ -0.91
LRCH3-215ENST00000476664 BLOC1S3Q6QNY0 202 aa9.39□□□□□ -0.91
LRCH3-215ENST00000476664 JAZF1Q86VZ6 243 aa9.39□□□□□ -0.91
LRCH3-215ENST00000476664 FRMD6Q96NE9 622 aa9.39□□□□□ -0.91
LRCH3-215ENST00000476664 KLHL42Q9P2K6 505 aa9.39□□□□□ -0.91
LRCH3-215ENST00000476664 NPATQ14207 1427 aa9.39□□□□□ -0.91
LRCH3-215ENST00000476664 VWDEQ8N2E2 1590 aa9.38□□□□□ -0.91
LRCH3-215ENST00000476664 EIF1AXP47813 144 aaKnown RBP9.38□□□□□ -0.91
LRCH3-215ENST00000476664 ENOX2Q16206 610 aaKnown RBP9.38□□□□□ -0.91
LRCH3-215ENST00000476664 NBPF20Q3BBV1 942 aa9.38□□□□□ -0.91
LRCH3-215ENST00000476664 C16orf46Q6P387 395 aa9.38□□□□□ -0.91
LRCH3-215ENST00000476664 DCBLD2Q96PD2 775 aa9.38□□□□□ -0.91
LRCH3-215ENST00000476664 ESF1Q9H501 851 aaKnown RBP9.38□□□□□ -0.91
LRCH3-215ENST00000476664 RNF19AQ9NV58 838 aa9.38□□□□□ -0.91
LRCH3-215ENST00000476664 METRNQ9UJH8 293 aa9.38□□□□□ -0.91
LRCH3-215ENST00000476664 WWC3Q9ULE0 1092 aa9.38□□□□□ -0.91
LRCH3-215ENST00000476664 CEP170BQ9Y4F5 1589 aaPredicted RBP9.37□□□□□ -0.91
LRCH3-215ENST00000476664 GIGYF1O75420 1035 aaPredicted RBP9.37□□□□□ -0.91
LRCH3-215ENST00000476664 HOXB3P14651 431 aaPredicted RBP9.37□□□□□ -0.91
LRCH3-215ENST00000476664 GORABQ5T7V8 394 aa9.37□□□□□ -0.91
LRCH3-215ENST00000476664 USP48Q86UV5 1035 aa9.37□□□□□ -0.91
LRCH3-215ENST00000476664 MCF2L2Q86YR7 1114 aa9.37□□□□□ -0.91
LRCH3-215ENST00000476664 MYO3AQ8NEV4 1616 aa9.37□□□□□ -0.91
LRCH3-215ENST00000476664 POLR1AO95602 1720 aaPredicted RBP9.36□□□□□ -0.91
LRCH3-215ENST00000476664 GPR182O15218 404 aa9.36□□□□□ -0.91
LRCH3-215ENST00000476664 TPD52L2O43399 206 aaKnown RBP9.36□□□□□ -0.91
LRCH3-215ENST00000476664 FZD6O60353 706 aa9.36□□□□□ -0.91
LRCH3-215ENST00000476664 IGHA2P01877 340 aa9.36□□□□□ -0.91
LRCH3-215ENST00000476664 XRCC5P13010 732 aaKnown RBP9.36□□□□□ -0.91
LRCH3-215ENST00000476664 HSP90AB2PQ58FF8 381 aa9.36□□□□□ -0.91
LRCH3-215ENST00000476664 GAS2L2Q8NHY3 880 aa9.36□□□□□ -0.91
LRCH3-215ENST00000476664 FBF1Q8TES7 1133 aa9.36□□□□□ -0.91
LRCH3-215ENST00000476664 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.36□□□□□ -0.91
LRCH3-215ENST00000476664 CCDC87Q9NVE4 849 aa9.36□□□□□ -0.91
LRCH3-215ENST00000476664 DMGDHQ9UI17 866 aaKnown RBP9.36□□□□□ -0.91
LRCH3-215ENST00000476664 PNMA6FA0A0J9YX94 578 aa9.35□□□□□ -0.91
LRCH3-215ENST00000476664 FGRP09769 529 aa9.35□□□□□ -0.91
LRCH3-215ENST00000476664 NBPF6Q5VWK0 638 aa9.35□□□□□ -0.91
LRCH3-215ENST00000476664 HS2ST1Q7LGA3 356 aa9.35□□□□□ -0.91
LRCH3-215ENST00000476664 KIF27Q86VH2 1401 aa9.35□□□□□ -0.91
LRCH3-215ENST00000476664 CKAP2LQ8IYA6 745 aa9.35□□□□□ -0.91
LRCH3-215ENST00000476664 NEURL4Q96JN8 1562 aa9.35□□□□□ -0.91
LRCH3-215ENST00000476664 NBPF4Q96M43 638 aa9.35□□□□□ -0.91
LRCH3-215ENST00000476664 NUDT12Q9BQG2 462 aa9.35□□□□□ -0.91
LRCH3-215ENST00000476664 COL4A3BPQ9Y5P4 624 aa9.35□□□□□ -0.91
LRCH3-215ENST00000476664 MRPL42Q9Y6G3 142 aaKnown RBP9.35□□□□□ -0.91
LRCH3-215ENST00000476664 STRCP1A6NGW2 1772 aa9.35□□□□□ -0.91
LRCH3-215ENST00000476664 ESPNB1AK53 854 aa9.34□□□□□ -0.91
LRCH3-215ENST00000476664 MYCP01106 439 aaPredicted RBP9.34□□□□□ -0.91
LRCH3-215ENST00000476664 ZNF394Q53GI3 561 aa9.34□□□□□ -0.91
LRCH3-215ENST00000476664 SH3BP5LQ7L8J4 393 aa9.34□□□□□ -0.91
LRCH3-215ENST00000476664 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.34□□□□□ -0.91
LRCH3-215ENST00000476664 ZNF526Q8TF50 670 aaPredicted RBP9.34□□□□□ -0.91
LRCH3-215ENST00000476664 SCG3Q8WXD2 468 aaKnown RBP9.34□□□□□ -0.91
LRCH3-215ENST00000476664 STIM2Q9P246 746 aa9.34□□□□□ -0.91
LRCH3-215ENST00000476664 MAGEC2Q9UBF1 373 aaPredicted RBP9.34□□□□□ -0.91
LRCH3-215ENST00000476664 PCDHB11Q9Y5F2 797 aa9.34□□□□□ -0.91
LRCH3-215ENST00000476664 AK5Q9Y6K8 562 aa9.34□□□□□ -0.91
LRCH3-215ENST00000476664 SCAPERQ9BY12 1400 aa9.33□□□□□ -0.92
LRCH3-215ENST00000476664 AGLP35573 1532 aa9.33□□□□□ -0.92
LRCH3-215ENST00000476664 RACK1P63244 317 aaKnown RBP9.33□□□□□ -0.92
LRCH3-215ENST00000476664 PTPN12Q05209 780 aaKnown RBP9.33□□□□□ -0.92
LRCH3-215ENST00000476664 LAPTM4BQ86VI4 370 aa9.33□□□□□ -0.92
LRCH3-215ENST00000476664 ABTB2Q8N961 1025 aa9.33□□□□□ -0.92
LRCH3-215ENST00000476664 NIF3L1Q9GZT8 377 aa9.33□□□□□ -0.92
LRCH3-215ENST00000476664 TMX1Q9H3N1 280 aa9.33□□□□□ -0.92
LRCH3-215ENST00000476664 ZNF358Q9NW07 568 aa9.33□□□□□ -0.92
LRCH3-215ENST00000476664 PCDHGB7Q9Y5F8 929 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms