RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 MUM1L1Q5H9M0 696 aa12.48□□□□□ -0.41
ABCF1-205ENST00000475993 TICAM2Q86XR7 235 aa12.48□□□□□ -0.41
ABCF1-205ENST00000475993 LRRC8AQ8IWT6 810 aa12.48□□□□□ -0.41
ABCF1-205ENST00000475993 RNF217Q8TC41 542 aa12.48□□□□□ -0.41
ABCF1-205ENST00000475993 NUP62CLQ9H1M0 184 aa12.48□□□□□ -0.41
ABCF1-205ENST00000475993 CLIP2Q9UDT6 1046 aa12.48□□□□□ -0.41
ABCF1-205ENST00000475993 MTMR6Q9Y217 621 aa12.48□□□□□ -0.41
ABCF1-205ENST00000475993 CCDC9Q9Y3X0 531 aaKnown RBP12.48□□□□□ -0.41
ABCF1-205ENST00000475993 PTPRCP08575 1304 aa12.48□□□□□ -0.41
ABCF1-205ENST00000475993 NEMFO60524 1076 aa12.48□□□□□ -0.41
ABCF1-205ENST00000475993 ANO6Q4KMQ2 910 aa12.48□□□□□ -0.41
ABCF1-205ENST00000475993 HSP90AB3PQ58FF7 597 aa12.48□□□□□ -0.41
ABCF1-205ENST00000475993 TSHZ3Q63HK5 1081 aa12.48□□□□□ -0.41
ABCF1-205ENST00000475993 SMC3Q9UQE7 1217 aa12.48□□□□□ -0.41
ABCF1-205ENST00000475993 CPSF1Q10570 1443 aaKnown RBP12.47□□□□□ -0.41
ABCF1-205ENST00000475993 CASQ1P31415 396 aa12.47□□□□□ -0.41
ABCF1-205ENST00000475993 SART3Q15020 963 aaKnown RBP12.47□□□□□ -0.41
ABCF1-205ENST00000475993 RBM43Q6ZSC3 357 aaKnown RBP12.47□□□□□ -0.41
ABCF1-205ENST00000475993 PLCD4Q9BRC7 762 aa12.47□□□□□ -0.41
ABCF1-205ENST00000475993 LIMCH1Q9UPQ0 1083 aa12.47□□□□□ -0.41
ABCF1-205ENST00000475993 CD163L1Q9NR16 1453 aa12.47□□□□□ -0.41
ABCF1-205ENST00000475993 SYT10Q6XYQ8 523 aa12.47□□□□□ -0.41
ABCF1-205ENST00000475993 RUFY3Q7L099 469 aa12.47□□□□□ -0.41
ABCF1-205ENST00000475993 KCND1Q9NSA2 647 aa12.47□□□□□ -0.41
ABCF1-205ENST00000475993 AATKQ6ZMQ8 1374 aa12.46□□□□□ -0.41
ABCF1-205ENST00000475993 PLA2G4AP47712 749 aa12.46□□□□□ -0.41
ABCF1-205ENST00000475993 AK2P54819 239 aa12.46□□□□□ -0.41
ABCF1-205ENST00000475993 GTF3C6Q969F1 213 aa12.46□□□□□ -0.41
ABCF1-205ENST00000475993 BRMS1Q9HCU9 246 aa12.46□□□□□ -0.41
ABCF1-205ENST00000475993 LIG1P18858 919 aa12.46□□□□□ -0.42
ABCF1-205ENST00000475993 CAMK4Q16566 473 aa12.46□□□□□ -0.42
ABCF1-205ENST00000475993 NFATC2IPQ8NCF5 419 aa12.46□□□□□ -0.42
ABCF1-205ENST00000475993 ELP1O95163 1332 aa12.46□□□□□ -0.42
ABCF1-205ENST00000475993 PNMA6AP0CW24 399 aaPredicted RBP12.45□□□□□ -0.42
ABCF1-205ENST00000475993 SEMA3FQ13275 785 aa12.45□□□□□ -0.42
ABCF1-205ENST00000475993 CEP120Q8N960 986 aa12.45□□□□□ -0.42
ABCF1-205ENST00000475993 FAM212AQ96EL1 285 aa12.45□□□□□ -0.42
ABCF1-205ENST00000475993 IL25Q9H293 177 aa12.45□□□□□ -0.42
ABCF1-205ENST00000475993 L2HGDHQ9H9P8 463 aa12.45□□□□□ -0.42
ABCF1-205ENST00000475993 MYO1CO00159 1063 aa12.45□□□□□ -0.42
ABCF1-205ENST00000475993 HTATSF1O43719 755 aaKnown RBP12.45□□□□□ -0.42
ABCF1-205ENST00000475993 TTC6Q86TZ1 520 aa12.45□□□□□ -0.42
ABCF1-205ENST00000475993 AFAP1Q8N556 730 aa12.45□□□□□ -0.42
ABCF1-205ENST00000475993 RILPL2Q969X0 211 aa12.45□□□□□ -0.42
ABCF1-205ENST00000475993 POLKQ9UBT6 870 aa12.45□□□□□ -0.42
ABCF1-205ENST00000475993 SH3BP1Q9Y3L3 701 aa12.45□□□□□ -0.42
ABCF1-205ENST00000475993 JRKLQ9Y4A0 524 aa12.45□□□□□ -0.42
ABCF1-205ENST00000475993 RIMS2Q9UQ26 1411 aa12.45□□□□□ -0.42
ABCF1-205ENST00000475993 CDK12Q9NYV4 1490 aaPredicted RBP12.45□□□□□ -0.42
ABCF1-205ENST00000475993 CAMSAP1Q5T5Y3 1602 aa12.45□□□□□ -0.42
ABCF1-205ENST00000475993 ZCCHC11Q5TAX3 1644 aaKnown RBP12.45□□□□□ -0.42
ABCF1-205ENST00000475993 KIF3BO15066 747 aa12.44□□□□□ -0.42
ABCF1-205ENST00000475993 CLCN6P51797 869 aa12.44□□□□□ -0.42
ABCF1-205ENST00000475993 TXLNBQ8N3L3 684 aa12.44□□□□□ -0.42
ABCF1-205ENST00000475993 TNMDQ9H2S6 317 aa12.44□□□□□ -0.42
ABCF1-205ENST00000475993 STAP2Q9UGK3 403 aa12.44□□□□□ -0.42
ABCF1-205ENST00000475993 LCMT1Q9UIC8 334 aa12.44□□□□□ -0.42
ABCF1-205ENST00000475993 KIF2AO00139 706 aaPredicted RBP12.44□□□□□ -0.42
ABCF1-205ENST00000475993 HMOX1P09601 288 aa12.44□□□□□ -0.42
ABCF1-205ENST00000475993 GJB2P29033 226 aa12.44□□□□□ -0.42
ABCF1-205ENST00000475993 TDO2P48775 406 aa12.44□□□□□ -0.42
ABCF1-205ENST00000475993 SARM1Q6SZW1 724 aa12.44□□□□□ -0.42
ABCF1-205ENST00000475993 CKAP2LQ8IYA6 745 aa12.44□□□□□ -0.42
ABCF1-205ENST00000475993 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.44□□□□□ -0.42
ABCF1-205ENST00000475993 DLG5Q8TDM6 1919 aa12.44□□□□□ -0.42
ABCF1-205ENST00000475993 SNX14Q9Y5W7 946 aa12.44□□□□□ -0.42
ABCF1-205ENST00000475993 ZRANB2O95218 330 aaKnown RBP eCLIP12.44□□□□□ -0.42
ABCF1-205ENST00000475993 SKILP12757 684 aa12.44□□□□□ -0.42
ABCF1-205ENST00000475993 ZNF165P49910 485 aa12.44□□□□□ -0.42
ABCF1-205ENST00000475993 TEX35Q5T0J7 233 aa12.44□□□□□ -0.42
ABCF1-205ENST00000475993 UNC5CLQ8IV45 518 aa12.44□□□□□ -0.42
ABCF1-205ENST00000475993 CCAR2Q8N163 923 aaKnown RBP12.44□□□□□ -0.42
ABCF1-205ENST00000475993 NEK11Q8NG66 645 aa12.44□□□□□ -0.42
ABCF1-205ENST00000475993 TERF2IPQ9NYB0 399 aa12.44□□□□□ -0.42
ABCF1-205ENST00000475993 DONSONQ9NYP3 566 aa12.44□□□□□ -0.42
ABCF1-205ENST00000475993 CCZ1BP86790 482 aa12.43□□□□□ -0.42
ABCF1-205ENST00000475993 CCZ1P86791 482 aaPredicted RBP12.43□□□□□ -0.42
ABCF1-205ENST00000475993 ARID5BQ14865 1188 aa12.43□□□□□ -0.42
ABCF1-205ENST00000475993 ERCC6LQ2NKX8 1250 aa12.43□□□□□ -0.42
ABCF1-205ENST00000475993 MRFAP1L1Q96HT8 127 aa12.43□□□□□ -0.42
ABCF1-205ENST00000475993 DACT1Q9NYF0 836 aa12.43□□□□□ -0.42
ABCF1-205ENST00000475993 LARGE1O95461 756 aa12.43□□□□□ -0.42
ABCF1-205ENST00000475993 NBPF20Q3BBV1 942 aa12.43□□□□□ -0.42
ABCF1-205ENST00000475993 LRRCC1Q9C099 1032 aa12.43□□□□□ -0.42
ABCF1-205ENST00000475993 DDX19AQ9NUU7 478 aaKnown RBP12.43□□□□□ -0.42
ABCF1-205ENST00000475993 SUFUQ9UMX1 484 aa12.43□□□□□ -0.42
ABCF1-205ENST00000475993 TTC21BQ7Z4L5 1316 aa12.42□□□□□ -0.42
ABCF1-205ENST00000475993 CAVIN2O95810 425 aa12.42□□□□□ -0.42
ABCF1-205ENST00000475993 KRT85P78386 507 aa12.42□□□□□ -0.42
ABCF1-205ENST00000475993 CCDC93Q567U6 631 aa12.42□□□□□ -0.42
ABCF1-205ENST00000475993 KRBA2Q6ZNG9 492 aa12.42□□□□□ -0.42
ABCF1-205ENST00000475993 LARP6Q9BRS8 491 aaKnown RBP12.42□□□□□ -0.42
ABCF1-205ENST00000475993 UBXN6Q9BZV1 441 aa12.42□□□□□ -0.42
ABCF1-205ENST00000475993 CLSTN2Q9H4D0 955 aa12.42□□□□□ -0.42
ABCF1-205ENST00000475993 EXOC6BQ9Y2D4 811 aa12.42□□□□□ -0.42
ABCF1-205ENST00000475993 FRMPD1Q5SYB0 1578 aa12.42□□□□□ -0.42
ABCF1-205ENST00000475993 TTC21AQ8NDW8 1320 aa12.42□□□□□ -0.42
ABCF1-205ENST00000475993 TPM4P67936 248 aa12.42□□□□□ -0.42
ABCF1-205ENST00000475993 MAP2K1Q02750 393 aaPredicted RBP12.42□□□□□ -0.42
ABCF1-205ENST00000475993 SGSM3Q96HU1 749 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms