RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 C21orf2O43822 256 aa9.58□□□□□ -0.88
LTN1-204ENST00000475344 TNP2Q05952 138 aa9.58□□□□□ -0.88
LTN1-204ENST00000475344 GALNT6Q8NCL4 622 aa9.57□□□□□ -0.88
LTN1-204ENST00000475344 FAM200AQ8TCP9 573 aa9.57□□□□□ -0.88
LTN1-204ENST00000475344 HSH2DQ96JZ2 352 aa9.57□□□□□ -0.88
LTN1-204ENST00000475344 RNF225M0QZC1 329 aaPredicted RBP9.56□□□□□ -0.88
LTN1-204ENST00000475344 OIP5O43482 229 aa9.56□□□□□ -0.88
LTN1-204ENST00000475344 FAM157BP0CG42 384 aa9.56□□□□□ -0.88
LTN1-204ENST00000475344 ALDH16A1Q8IZ83 802 aa9.56□□□□□ -0.88
LTN1-204ENST00000475344 GGA1Q9UJY5 639 aa9.56□□□□□ -0.88
LTN1-204ENST00000475344 NOVA2Q9UNW9 492 aaKnown RBP9.56□□□□□ -0.88
LTN1-204ENST00000475344 GOLGA6L1Q8N7Z2 621 aa9.55□□□□□ -0.88
LTN1-204ENST00000475344 CCDC97Q96F63 343 aaPredicted RBP9.55□□□□□ -0.88
LTN1-204ENST00000475344 ARXQ96QS3 562 aa9.55□□□□□ -0.88
LTN1-204ENST00000475344 C2orf49Q9BVC5 232 aaPredicted RBP9.55□□□□□ -0.88
LTN1-204ENST00000475344 STRN4Q9NRL3 753 aa9.55□□□□□ -0.88
LTN1-204ENST00000475344 GDF2Q9UK05 429 aaPredicted RBP9.55□□□□□ -0.88
LTN1-204ENST00000475344 PRR12Q9ULL5 1215 aa9.55□□□□□ -0.88
LTN1-204ENST00000475344 DNMT3AQ9Y6K1 912 aaPredicted RBP9.55□□□□□ -0.88
LTN1-204ENST00000475344 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.54□□□□□ -0.88
LTN1-204ENST00000475344 IRS1P35568 1242 aa9.54□□□□□ -0.88
LTN1-204ENST00000475344 HIRAP54198 1017 aaPredicted RBP9.54□□□□□ -0.88
LTN1-204ENST00000475344 C1orf53Q5VUE5 145 aa9.54□□□□□ -0.88
LTN1-204ENST00000475344 C1orf229Q6ZS94 237 aaPredicted RBP9.54□□□□□ -0.88
LTN1-204ENST00000475344 SCARF2Q96GP6 870 aaPredicted RBP9.54□□□□□ -0.88
LTN1-204ENST00000475344 RRAGCQ9HB90 399 aa9.54□□□□□ -0.88
LTN1-204ENST00000475344 MARK1Q9P0L2 795 aa9.54□□□□□ -0.88
LTN1-204ENST00000475344 HCN2Q9UL51 889 aa9.54□□□□□ -0.88
LTN1-204ENST00000475344 NEURL1BA8MQ27 555 aa9.53□□□□□ -0.88
LTN1-204ENST00000475344 SHISA8B8ZZ34 492 aa9.53□□□□□ -0.88
LTN1-204ENST00000475344 AMPD1P23109 780 aa9.53□□□□□ -0.88
LTN1-204ENST00000475344 SAMD5Q5TGI4 173 aa9.53□□□□□ -0.88
LTN1-204ENST00000475344 ZNF280CQ8ND82 737 aa9.53□□□□□ -0.88
LTN1-204ENST00000475344 EDARADDQ8WWZ3 215 aa9.53□□□□□ -0.88
LTN1-204ENST00000475344 CEP63Q96MT8 703 aa9.53□□□□□ -0.88
LTN1-204ENST00000475344 ANKIB1Q9P2G1 1089 aa9.53□□□□□ -0.88
LTN1-204ENST00000475344 IGFBP4P22692 258 aa9.52□□□□□ -0.89
LTN1-204ENST00000475344 PODNQ7Z5L7 613 aa9.52□□□□□ -0.89
LTN1-204ENST00000475344 C7orf43Q8WVR3 580 aa9.52□□□□□ -0.89
LTN1-204ENST00000475344 SUSD3Q96L08 255 aa9.52□□□□□ -0.89
LTN1-204ENST00000475344 GPC6Q9Y625 555 aaPredicted RBP9.52□□□□□ -0.89
LTN1-204ENST00000475344 CNTNAP5Q8WYK1 1306 aa9.52□□□□□ -0.89
LTN1-204ENST00000475344 ARAFP10398 606 aa9.51□□□□□ -0.89
LTN1-204ENST00000475344 KCNMA1Q12791 1236 aa9.51□□□□□ -0.89
LTN1-204ENST00000475344 POTEAQ6S8J7 498 aa9.51□□□□□ -0.89
LTN1-204ENST00000475344 C14orf37Q86TY3 774 aa9.51□□□□□ -0.89
LTN1-204ENST00000475344 STAG2Q8N3U4 1231 aa9.51□□□□□ -0.89
LTN1-204ENST00000475344 VTI1AQ96AJ9 217 aa9.51□□□□□ -0.89
LTN1-204ENST00000475344 EFSO43281 561 aa9.5□□□□□ -0.89
LTN1-204ENST00000475344 PCBP4P57723 403 aaKnown RBP9.5□□□□□ -0.89
LTN1-204ENST00000475344 RASSF7Q02833 373 aa9.5□□□□□ -0.89
LTN1-204ENST00000475344 SFSWAPQ12872 951 aaKnown RBP9.5□□□□□ -0.89
LTN1-204ENST00000475344 FAM182BQ5T319 152 aa9.5□□□□□ -0.89
LTN1-204ENST00000475344 SLCO4C1Q6ZQN7 724 aa9.5□□□□□ -0.89
LTN1-204ENST00000475344 BRD7Q9NPI1 651 aa9.5□□□□□ -0.89
LTN1-204ENST00000475344 LRRC4BQ9NT99 713 aa9.5□□□□□ -0.89
LTN1-204ENST00000475344 GDF11O95390 407 aa9.49□□□□□ -0.89
LTN1-204ENST00000475344 ADH6P28332 368 aa9.49□□□□□ -0.89
LTN1-204ENST00000475344 LAMC2Q13753 1193 aa9.49□□□□□ -0.89
LTN1-204ENST00000475344 GRIN2CQ14957 1233 aa9.49□□□□□ -0.89
LTN1-204ENST00000475344 RAB44Q7Z6P3 723 aaPredicted RBP9.48□□□□□ -0.89
LTN1-204ENST00000475344 TMEM151AQ8N4L1 468 aa9.48□□□□□ -0.89
LTN1-204ENST00000475344 BEND7Q8N7W2 519 aaPredicted RBP9.48□□□□□ -0.89
LTN1-204ENST00000475344 PRIMPOLQ96LW4 560 aa9.48□□□□□ -0.89
LTN1-204ENST00000475344 SERPINA10Q9UK55 444 aa9.48□□□□□ -0.89
LTN1-204ENST00000475344 ZMIZ1Q9ULJ6 1067 aa9.48□□□□□ -0.89
LTN1-204ENST00000475344 PHF20L1A8MW92 1017 aa9.47□□□□□ -0.89
LTN1-204ENST00000475344 PRMT3O60678 531 aa9.47□□□□□ -0.89
LTN1-204ENST00000475344 EPXP11678 715 aa9.47□□□□□ -0.89
LTN1-204ENST00000475344 WEE1P30291 646 aa9.47□□□□□ -0.89
LTN1-204ENST00000475344 GSK3AP49840 483 aa9.47□□□□□ -0.89
LTN1-204ENST00000475344 SNRPNP63162 240 aaKnown RBP9.47□□□□□ -0.89
LTN1-204ENST00000475344 RTN1Q16799 776 aa9.47□□□□□ -0.89
LTN1-204ENST00000475344 ZNF468Q5VIY5 522 aaPredicted RBP9.47□□□□□ -0.89
LTN1-204ENST00000475344 STK32AQ8WU08 396 aa9.47□□□□□ -0.89
LTN1-204ENST00000475344 TYRO3Q06418 890 aa9.46□□□□□ -0.9
LTN1-204ENST00000475344 HIF1AQ16665 826 aa9.46□□□□□ -0.9
LTN1-204ENST00000475344 SYT9Q86SS6 491 aa9.46□□□□□ -0.9
LTN1-204ENST00000475344 FCHSD1Q86WN1 690 aa9.46□□□□□ -0.9
LTN1-204ENST00000475344 SLC30A3Q99726 388 aa9.46□□□□□ -0.9
LTN1-204ENST00000475344 KLF15Q9UIH9 416 aa9.46□□□□□ -0.9
LTN1-204ENST00000475344 FOXO3O43524 673 aa9.45□□□□□ -0.9
LTN1-204ENST00000475344 BTLAQ7Z6A9 289 aa9.45□□□□□ -0.9
LTN1-204ENST00000475344 KLK14Q9P0G3 267 aa9.45□□□□□ -0.9
LTN1-204ENST00000475344 KCNH4Q9UQ05 1017 aa9.45□□□□□ -0.9
LTN1-204ENST00000475344 SPEM2Q0P670 501 aa9.44□□□□□ -0.9
LTN1-204ENST00000475344 DGKZQ13574 1117 aa9.44□□□□□ -0.9
LTN1-204ENST00000475344 KANK3Q6NY19 840 aa9.44□□□□□ -0.9
LTN1-204ENST00000475344 CCDC82Q8N4S0 544 aa9.44□□□□□ -0.9
LTN1-204ENST00000475344 KCTD17Q8N5Z5 321 aa9.44□□□□□ -0.9
LTN1-204ENST00000475344 PBXIP1Q96AQ6 731 aa9.44□□□□□ -0.9
LTN1-204ENST00000475344 AVENQ9NQS1 362 aaPredicted RBP9.44□□□□□ -0.9
LTN1-204ENST00000475344 ACIN1Q9UKV3 1341 aaKnown RBP9.44□□□□□ -0.9
LTN1-204ENST00000475344 SRPK2P78362 688 aaKnown RBP9.43□□□□□ -0.9
LTN1-204ENST00000475344 ELOAQ14241 798 aaKnown RBP9.43□□□□□ -0.9
LTN1-204ENST00000475344 SWI5Q1ZZU3 235 aa9.43□□□□□ -0.9
LTN1-204ENST00000475344 BTBD6Q96KE9 485 aa9.43□□□□□ -0.9
LTN1-204ENST00000475344 MKL2Q9ULH7 1088 aa9.43□□□□□ -0.9
LTN1-204ENST00000475344 ATG7O95352 703 aa9.42□□□□□ -0.9
LTN1-204ENST00000475344 FKBP5Q13451 457 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms