RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 SLC4A9Q96Q91 983 aa17.19■□□□□ 0.34
TRAF4-210ENST00000475329 METTL22Q9BUU2 404 aaPredicted RBP17.19■□□□□ 0.34
TRAF4-210ENST00000475329 PDZRN3Q9UPQ7 1066 aa17.19■□□□□ 0.34
TRAF4-210ENST00000475329 CYP19A1P11511 503 aaPredicted RBP17.18■□□□□ 0.34
TRAF4-210ENST00000475329 SKAP1Q86WV1 359 aa17.18■□□□□ 0.34
TRAF4-210ENST00000475329 SEPT12Q8IYM1 358 aa17.18■□□□□ 0.34
TRAF4-210ENST00000475329 NUP98P52948 1817 aa17.17■□□□□ 0.34
TRAF4-210ENST00000475329 MYH14Q7Z406 1995 aaKnown RBP17.17■□□□□ 0.34
TRAF4-210ENST00000475329 KCNQ2O43526 872 aa17.17■□□□□ 0.34
TRAF4-210ENST00000475329 MYD88Q99836 296 aa17.17■□□□□ 0.34
TRAF4-210ENST00000475329 HDAC5Q9UQL6 1122 aa17.17■□□□□ 0.34
TRAF4-210ENST00000475329 LRRFIP2Q9Y608 721 aaKnown RBP17.17■□□□□ 0.34
TRAF4-210ENST00000475329 TAF1LQ8IZX4 1826 aa17.17■□□□□ 0.34
TRAF4-210ENST00000475329 LOC102724428A0A0B4J2F2 783 aa17.16■□□□□ 0.34
TRAF4-210ENST00000475329 RGS3P49796 1198 aa17.16■□□□□ 0.34
TRAF4-210ENST00000475329 SIK1P57059 783 aa17.16■□□□□ 0.34
TRAF4-210ENST00000475329 CWF19L2Q2TBE0 894 aaKnown RBP17.16■□□□□ 0.34
TRAF4-210ENST00000475329 POTEAQ6S8J7 498 aa17.16■□□□□ 0.34
TRAF4-210ENST00000475329 NEURL1BA8MQ27 555 aa17.15■□□□□ 0.34
TRAF4-210ENST00000475329 TTLL7Q6ZT98 887 aa17.15■□□□□ 0.34
TRAF4-210ENST00000475329 C9orf78Q9NZ63 289 aaPredicted RBP17.15■□□□□ 0.34
TRAF4-210ENST00000475329 GRM8O00222 908 aa17.14■□□□□ 0.33
TRAF4-210ENST00000475329 IGKV5-2P06315 115 aa17.14■□□□□ 0.33
TRAF4-210ENST00000475329 ATP6V1AP38606 617 aa17.14■□□□□ 0.33
TRAF4-210ENST00000475329 NUCB1Q02818 461 aa17.14■□□□□ 0.33
TRAF4-210ENST00000475329 KIF6Q6ZMV9 814 aa17.14■□□□□ 0.33
TRAF4-210ENST00000475329 TSHZ2Q9NRE2 1034 aa17.14■□□□□ 0.33
TRAF4-210ENST00000475329 BCORQ6W2J9 1755 aa17.14■□□□□ 0.33
TRAF4-210ENST00000475329 UTYO14607 1347 aa17.14■□□□□ 0.33
TRAF4-210ENST00000475329 NBPF7P0C2Y1 421 aaPredicted RBP17.13■□□□□ 0.33
TRAF4-210ENST00000475329 ATP8B2P98198 1209 aa17.13■□□□□ 0.33
TRAF4-210ENST00000475329 DCTPP1Q9H773 170 aa17.13■□□□□ 0.33
TRAF4-210ENST00000475329 ZBTB1Q9Y2K1 713 aa17.13■□□□□ 0.33
TRAF4-210ENST00000475329 ZNF330Q9Y3S2 320 aaPredicted RBP17.13■□□□□ 0.33
TRAF4-210ENST00000475329 GCKRQ14397 625 aa17.12■□□□□ 0.33
TRAF4-210ENST00000475329 ZBTB3Q9H5J0 574 aa17.12■□□□□ 0.33
TRAF4-210ENST00000475329 CCDC87Q9NVE4 849 aa17.12■□□□□ 0.33
TRAF4-210ENST00000475329 IL6STP40189 918 aaPredicted RBP17.11■□□□□ 0.33
TRAF4-210ENST00000475329 RBM6P78332 1123 aaKnown RBP17.11■□□□□ 0.33
TRAF4-210ENST00000475329 FAM182BQ5T319 152 aa17.11■□□□□ 0.33
TRAF4-210ENST00000475329 CHD1LQ86WJ1 897 aa17.11■□□□□ 0.33
TRAF4-210ENST00000475329 RXRBP28702 533 aa17.1■□□□□ 0.33
TRAF4-210ENST00000475329 CRKLP46109 303 aaKnown RBP17.1■□□□□ 0.33
TRAF4-210ENST00000475329 ITPK1Q13572 414 aa17.1■□□□□ 0.33
TRAF4-210ENST00000475329 ANKRD45Q5TZF3 282 aa17.1■□□□□ 0.33
TRAF4-210ENST00000475329 NPM2Q86SE8 214 aaKnown RBP17.1■□□□□ 0.33
TRAF4-210ENST00000475329 ZBTB47Q9UFB7 747 aaPredicted RBP17.1■□□□□ 0.33
TRAF4-210ENST00000475329 MAP3K15Q6ZN16 1313 aa17.1■□□□□ 0.33
TRAF4-210ENST00000475329 PNMA6EA0A0J9YXQ4 647 aa17.09■□□□□ 0.33
TRAF4-210ENST00000475329 ATP5J2-PTCD1G3V325 749 aa17.09■□□□□ 0.33
TRAF4-210ENST00000475329 KRT27Q7Z3Y8 459 aa17.09■□□□□ 0.33
TRAF4-210ENST00000475329 SSH3Q8TE77 659 aa17.09■□□□□ 0.33
TRAF4-210ENST00000475329 LNPKQ9C0E8 428 aa17.09■□□□□ 0.33
TRAF4-210ENST00000475329 COL15A1P39059 1388 aa17.09■□□□□ 0.33
TRAF4-210ENST00000475329 SCN7AQ01118 1682 aa17.09■□□□□ 0.33
TRAF4-210ENST00000475329 MYH3P11055 1940 aa17.09■□□□□ 0.33
TRAF4-210ENST00000475329 PDE4AP27815 886 aa17.08■□□□□ 0.32
TRAF4-210ENST00000475329 MTX1Q13505 466 aa17.08■□□□□ 0.32
TRAF4-210ENST00000475329 POLA2Q14181 598 aa17.08■□□□□ 0.32
TRAF4-210ENST00000475329 INTS5Q6P9B9 1019 aaKnown RBP17.08■□□□□ 0.32
TRAF4-210ENST00000475329 PTF1AQ7RTS3 328 aa17.08■□□□□ 0.32
TRAF4-210ENST00000475329 PPP1R42Q7Z4L9 355 aa17.08■□□□□ 0.32
TRAF4-210ENST00000475329 SUCLG2Q96I99 432 aa17.08■□□□□ 0.32
TRAF4-210ENST00000475329 CWC25Q9NXE8 425 aaPredicted RBP17.08■□□□□ 0.32
TRAF4-210ENST00000475329 TCIRG1Q13488 830 aa17.07■□□□□ 0.32
TRAF4-210ENST00000475329 HSP90AB3PQ58FF7 597 aa17.07■□□□□ 0.32
TRAF4-210ENST00000475329 FAM196AQ6ZSG2 479 aa17.07■□□□□ 0.32
TRAF4-210ENST00000475329 CCDC191Q8NCU4 936 aa17.07■□□□□ 0.32
TRAF4-210ENST00000475329 ARXQ96QS3 562 aa17.07■□□□□ 0.32
TRAF4-210ENST00000475329 C4BP0C0L5 1744 aa17.07■□□□□ 0.32
TRAF4-210ENST00000475329 CNTNAP4Q9C0A0 1308 aa17.06■□□□□ 0.32
TRAF4-210ENST00000475329 SRGAP3O43295 1099 aa17.06■□□□□ 0.32
TRAF4-210ENST00000475329 EIF5P55010 431 aaKnown RBP17.06■□□□□ 0.32
TRAF4-210ENST00000475329 DZIP3Q86Y13 1208 aaKnown RBP17.06■□□□□ 0.32
TRAF4-210ENST00000475329 ISCA1Q9BUE6 129 aa17.06■□□□□ 0.32
TRAF4-210ENST00000475329 BCL11BQ9C0K0 894 aaPredicted RBP17.06■□□□□ 0.32
TRAF4-210ENST00000475329 A0A087WZG4 1122 aa17.05■□□□□ 0.32
TRAF4-210ENST00000475329 ERVV-1B6SEH8 477 aa17.05■□□□□ 0.32
TRAF4-210ENST00000475329 GIGYF2Q6Y7W6 1299 aaKnown RBP17.05■□□□□ 0.32
TRAF4-210ENST00000475329 UBE3BQ7Z3V4 1068 aa17.05■□□□□ 0.32
TRAF4-210ENST00000475329 LINC00116Q8NCU8 138 aa17.05■□□□□ 0.32
TRAF4-210ENST00000475329 BICC1Q9H694 974 aaKnown RBP17.05■□□□□ 0.32
TRAF4-210ENST00000475329 LAMB2P55268 1798 aa17.05■□□□□ 0.32
TRAF4-210ENST00000475329 TRIM28Q13263 835 aaKnown RBP17.04■□□□□ 0.32
TRAF4-210ENST00000475329 KAZALD1Q96I82 304 aa17.04■□□□□ 0.32
TRAF4-210ENST00000475329 CCNL1Q9UK58 526 aaPredicted RBP17.04■□□□□ 0.32
TRAF4-210ENST00000475329 C4AP0C0L4 1744 aa17.04■□□□□ 0.32
TRAF4-210ENST00000475329 H7C1W4 665 aa17.03■□□□□ 0.32
TRAF4-210ENST00000475329 CASP7P55210 303 aa17.03■□□□□ 0.32
TRAF4-210ENST00000475329 FAM161AQ3B820 660 aa17.03■□□□□ 0.32
TRAF4-210ENST00000475329 EXOC6BQ9Y2D4 811 aa17.03■□□□□ 0.32
TRAF4-210ENST00000475329 APBB1O00213 710 aa17.02■□□□□ 0.32
TRAF4-210ENST00000475329 RAB11FIP3O75154 756 aa17.02■□□□□ 0.32
TRAF4-210ENST00000475329 HSP90AB4PQ58FF6 505 aa17.02■□□□□ 0.32
TRAF4-210ENST00000475329 RC3H1Q5TC82 1133 aaKnown RBP17.02■□□□□ 0.32
TRAF4-210ENST00000475329 LRRCC1Q9C099 1032 aa17.02■□□□□ 0.32
TRAF4-210ENST00000475329 TBC1D2BQ9UPU7 963 aa17.02■□□□□ 0.32
TRAF4-210ENST00000475329 TUBGCP6Q96RT7 1819 aa17.02■□□□□ 0.31
TRAF4-210ENST00000475329 UBR3Q6ZT12 1888 aa17.01■□□□□ 0.31
TRAF4-210ENST00000475329 SURF6O75683 361 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms