RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 RBM6P78332 1123 aaKnown RBP5.44□□□□□ -1.54
CCNL1-215ENST00000474539 BMS1Q14692 1282 aaKnown RBP5.44□□□□□ -1.54
CCNL1-215ENST00000474539 RABEP1Q15276 862 aa5.44□□□□□ -1.54
CCNL1-215ENST00000474539 MCTP1Q6DN14 999 aa5.44□□□□□ -1.54
CCNL1-215ENST00000474539 CNBD1Q8NA66 436 aa5.44□□□□□ -1.54
CCNL1-215ENST00000474539 CERKQ8TCT0 537 aa5.44□□□□□ -1.54
CCNL1-215ENST00000474539 CNNM2Q9H8M5 875 aa5.44□□□□□ -1.54
CCNL1-215ENST00000474539 BTG4Q9NY30 223 aa5.44□□□□□ -1.54
CCNL1-215ENST00000474539 FAM13BQ9NYF5 915 aa5.44□□□□□ -1.54
CCNL1-215ENST00000474539 LRRFIP2Q9Y608 721 aaKnown RBP5.44□□□□□ -1.54
CCNL1-215ENST00000474539 ZCCHC11Q5TAX3 1644 aaKnown RBP5.44□□□□□ -1.54
CCNL1-215ENST00000474539 AGLP35573 1532 aa5.44□□□□□ -1.54
CCNL1-215ENST00000474539 NECTIN2Q92692 538 aa5.44□□□□□ -1.54
CCNL1-215ENST00000474539 CYP46A1Q9Y6A2 500 aa5.44□□□□□ -1.54
CCNL1-215ENST00000474539 SHROOM2Q13796 1616 aa5.44□□□□□ -1.54
CCNL1-215ENST00000474539 SBNO2Q9Y2G9 1366 aa5.44□□□□□ -1.54
CCNL1-215ENST00000474539 IL15P40933 162 aaPredicted RBP5.44□□□□□ -1.54
CCNL1-215ENST00000474539 EXOSC9Q06265 439 aaKnown RBP5.44□□□□□ -1.54
CCNL1-215ENST00000474539 DCAF15Q66K64 600 aa5.44□□□□□ -1.54
CCNL1-215ENST00000474539 ASXL1Q8IXJ9 1541 aa5.44□□□□□ -1.54
CCNL1-215ENST00000474539 H7C1D1 291 aa5.44□□□□□ -1.54
CCNL1-215ENST00000474539 PTCD1O75127 700 aaKnown RBP5.44□□□□□ -1.54
CCNL1-215ENST00000474539 RRS1Q15050 365 aaKnown RBP5.44□□□□□ -1.54
CCNL1-215ENST00000474539 AXDND1Q5T1B0 1012 aaPredicted RBP5.44□□□□□ -1.54
CCNL1-215ENST00000474539 TTC6Q86TZ1 520 aa5.44□□□□□ -1.54
CCNL1-215ENST00000474539 NME9Q86XW9 330 aa5.44□□□□□ -1.54
CCNL1-215ENST00000474539 NIM1KQ8IY84 436 aa5.44□□□□□ -1.54
CCNL1-215ENST00000474539 AS3MTQ9HBK9 375 aa5.44□□□□□ -1.54
CCNL1-215ENST00000474539 SRGAP3O43295 1099 aa5.43□□□□□ -1.54
CCNL1-215ENST00000474539 APBA3O96018 575 aa5.43□□□□□ -1.54
CCNL1-215ENST00000474539 CALM1P0DP23 149 aa5.43□□□□□ -1.54
CCNL1-215ENST00000474539 CALM2P0DP24 149 aa5.43□□□□□ -1.54
CCNL1-215ENST00000474539 CALM3P0DP25 149 aa5.43□□□□□ -1.54
CCNL1-215ENST00000474539 CETN2P41208 172 aa5.43□□□□□ -1.54
CCNL1-215ENST00000474539 ATP2B2Q01814 1243 aa5.43□□□□□ -1.54
CCNL1-215ENST00000474539 NFATC2IPQ8NCF5 419 aa5.43□□□□□ -1.54
CCNL1-215ENST00000474539 MYD88Q99836 296 aa5.43□□□□□ -1.54
CCNL1-215ENST00000474539 NAPBQ9H115 298 aa5.43□□□□□ -1.54
CCNL1-215ENST00000474539 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.43□□□□□ -1.54
CCNL1-215ENST00000474539 OFD1O75665 1012 aa5.43□□□□□ -1.54
CCNL1-215ENST00000474539 ANKRD13DQ6ZTN6 518 aa5.43□□□□□ -1.54
CCNL1-215ENST00000474539 SMARCE1Q969G3 411 aa5.43□□□□□ -1.54
CCNL1-215ENST00000474539 PRAG1Q86YV5 1406 aa5.43□□□□□ -1.54
CCNL1-215ENST00000474539 TMEM94Q12767 1356 aa5.43□□□□□ -1.54
CCNL1-215ENST00000474539 ADRA2BP18089 450 aa5.43□□□□□ -1.54
CCNL1-215ENST00000474539 DZIP3Q86Y13 1208 aaKnown RBP5.43□□□□□ -1.54
CCNL1-215ENST00000474539 CCDC148Q8NFR7 591 aa5.43□□□□□ -1.54
CCNL1-215ENST00000474539 LRRC45Q96CN5 670 aa5.43□□□□□ -1.54
CCNL1-215ENST00000474539 PCMTD1Q96MG8 357 aaPredicted RBP5.43□□□□□ -1.54
CCNL1-215ENST00000474539 QTRT2Q9H974 415 aaKnown RBP5.43□□□□□ -1.54
CCNL1-215ENST00000474539 TMOD4Q9NZQ9 345 aa5.43□□□□□ -1.54
CCNL1-215ENST00000474539 DENND2AQ9ULE3 1009 aa5.43□□□□□ -1.54
CCNL1-215ENST00000474539 RNF123Q5XPI4 1314 aa5.43□□□□□ -1.54
CCNL1-215ENST00000474539 ERVK-7P63135 1459 aa5.43□□□□□ -1.54
CCNL1-215ENST00000474539 GPR162Q16538 588 aa5.43□□□□□ -1.54
CCNL1-215ENST00000474539 AACSQ86V21 672 aa5.43□□□□□ -1.54
CCNL1-215ENST00000474539 ERMNQ8TAM6 284 aa5.43□□□□□ -1.54
CCNL1-215ENST00000474539 KRT23Q9C075 422 aa5.43□□□□□ -1.54
CCNL1-215ENST00000474539 HMG20BQ9P0W2 317 aa5.43□□□□□ -1.54
CCNL1-215ENST00000474539 CCDC39Q9UFE4 941 aa5.43□□□□□ -1.54
CCNL1-215ENST00000474539 PREX2Q70Z35 1606 aa5.42□□□□□ -1.54
CCNL1-215ENST00000474539 MYOM2P54296 1465 aa5.42□□□□□ -1.54
CCNL1-215ENST00000474539 SYNMO15061 1565 aa5.42□□□□□ -1.54
CCNL1-215ENST00000474539 ADGRL3Q9HAR2 1447 aa5.42□□□□□ -1.54
CCNL1-215ENST00000474539 GRIN3BO60391 1043 aa5.42□□□□□ -1.54
CCNL1-215ENST00000474539 GPS2Q13227 327 aa5.42□□□□□ -1.54
CCNL1-215ENST00000474539 CARD10Q9BWT7 1032 aa5.42□□□□□ -1.54
CCNL1-215ENST00000474539 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.42□□□□□ -1.54
CCNL1-215ENST00000474539 FBXO3Q9UK99 471 aa5.42□□□□□ -1.54
CCNL1-215ENST00000474539 MMP14P50281 582 aa5.42□□□□□ -1.54
CCNL1-215ENST00000474539 HMGN5P82970 282 aaKnown RBP5.42□□□□□ -1.54
CCNL1-215ENST00000474539 LDHAL6AQ6ZMR3 332 aa5.42□□□□□ -1.54
CCNL1-215ENST00000474539 KRT27Q7Z3Y8 459 aa5.42□□□□□ -1.54
CCNL1-215ENST00000474539 CATIPQ7Z7H3 387 aa5.42□□□□□ -1.54
CCNL1-215ENST00000474539 SPC25Q9HBM1 224 aa5.42□□□□□ -1.54
CCNL1-215ENST00000474539 ADAMTS8Q9UP79 889 aa5.42□□□□□ -1.54
CCNL1-215ENST00000474539 COG6Q9Y2V7 657 aa5.42□□□□□ -1.54
CCNL1-215ENST00000474539 CLASP1Q7Z460 1538 aa5.42□□□□□ -1.54
CCNL1-215ENST00000474539 ELMSAN1Q6PJG2 1045 aa5.42□□□□□ -1.54
CCNL1-215ENST00000474539 UNC5CLQ8IV45 518 aa5.42□□□□□ -1.54
CCNL1-215ENST00000474539 FMNL3Q8IVF7 1028 aa5.42□□□□□ -1.54
CCNL1-215ENST00000474539 WDR66Q8TBY9 1149 aa5.42□□□□□ -1.54
CCNL1-215ENST00000474539 BICD2Q8TD16 824 aa5.42□□□□□ -1.54
CCNL1-215ENST00000474539 PICK1Q9NRD5 415 aa5.42□□□□□ -1.54
CCNL1-215ENST00000474539 NIP7Q9Y221 180 aaKnown RBP eCLIP5.42□□□□□ -1.54
CCNL1-215ENST00000474539 PES1O00541 588 aaKnown RBP5.42□□□□□ -1.54
CCNL1-215ENST00000474539 TNNT3P45378 269 aaPredicted RBP5.42□□□□□ -1.54
CCNL1-215ENST00000474539 CETN1Q12798 172 aa5.42□□□□□ -1.54
CCNL1-215ENST00000474539 SLC27A3Q5K4L6 730 aa5.42□□□□□ -1.54
CCNL1-215ENST00000474539 DRC1Q96MC2 740 aa5.42□□□□□ -1.54
CCNL1-215ENST00000474539 SLKQ9H2G2 1235 aaPredicted RBP5.42□□□□□ -1.54
CCNL1-215ENST00000474539 NOP58Q9Y2X3 529 aaKnown RBP5.42□□□□□ -1.54
CCNL1-215ENST00000474539 INSRP06213 1382 aa5.41□□□□□ -1.54
CCNL1-215ENST00000474539 SAMD9LQ8IVG5 1584 aa5.41□□□□□ -1.54
CCNL1-215ENST00000474539 LPXNO60711 386 aa5.41□□□□□ -1.54
CCNL1-215ENST00000474539 MBD3O95983 291 aa5.41□□□□□ -1.54
CCNL1-215ENST00000474539 IRX6P78412 446 aaPredicted RBP5.41□□□□□ -1.54
CCNL1-215ENST00000474539 SASS6Q6UVJ0 657 aa5.41□□□□□ -1.54
CCNL1-215ENST00000474539 KSR2Q6VAB6 950 aa5.41□□□□□ -1.54
CCNL1-215ENST00000474539 PAF1Q8N7H5 531 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms