RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 DLG5Q8TDM6 1919 aa17.38■□□□□ 0.37
SAMM50-203ENST00000474323 CCDC66A2RUB6 948 aa17.37■□□□□ 0.37
SAMM50-203ENST00000474323 AP5Z1O43299 807 aa17.37■□□□□ 0.37
SAMM50-203ENST00000474323 HOXC9P31274 260 aa17.37■□□□□ 0.37
SAMM50-203ENST00000474323 PALD1Q9ULE6 856 aa17.37■□□□□ 0.37
SAMM50-203ENST00000474323 CNPY2Q9Y2B0 182 aa17.37■□□□□ 0.37
SAMM50-203ENST00000474323 RGPD1P0DJD0 1748 aa17.37■□□□□ 0.37
SAMM50-203ENST00000474323 APBB1O00213 710 aa17.37■□□□□ 0.37
SAMM50-203ENST00000474323 MST1RQ04912 1400 aa17.36■□□□□ 0.37
SAMM50-203ENST00000474323 HMMRO75330 724 aa17.36■□□□□ 0.37
SAMM50-203ENST00000474323 LMOD3Q0VAK6 560 aa17.36■□□□□ 0.37
SAMM50-203ENST00000474323 NOL8Q76FK4 1167 aaKnown RBP17.36■□□□□ 0.37
SAMM50-203ENST00000474323 KRT28Q7Z3Y7 464 aa17.36■□□□□ 0.37
SAMM50-203ENST00000474323 NAP1L2Q9ULW6 460 aaPredicted RBP17.36■□□□□ 0.37
SAMM50-203ENST00000474323 PAXBP1Q9Y5B6 917 aa17.36■□□□□ 0.37
SAMM50-203ENST00000474323 ATP6V1DQ9Y5K8 247 aa17.36■□□□□ 0.37
SAMM50-203ENST00000474323 LTN1O94822 1766 aa17.36■□□□□ 0.37
SAMM50-203ENST00000474323 EPB41L2O43491 1005 aaKnown RBP17.36■□□□□ 0.37
SAMM50-203ENST00000474323 ZSCAN22P10073 491 aaPredicted RBP17.36■□□□□ 0.37
SAMM50-203ENST00000474323 LTV1Q96GA3 475 aaPredicted RBP17.36■□□□□ 0.37
SAMM50-203ENST00000474323 SPC24Q8NBT2 197 aa17.35■□□□□ 0.37
SAMM50-203ENST00000474323 DDX17Q92841 729 aaKnown RBP17.35■□□□□ 0.37
SAMM50-203ENST00000474323 ZNF335Q9H4Z2 1342 aaPredicted RBP17.35■□□□□ 0.37
SAMM50-203ENST00000474323 KIF1AQ12756 1690 aa17.35■□□□□ 0.37
SAMM50-203ENST00000474323 FAM83GA6ND36 823 aa17.35■□□□□ 0.37
SAMM50-203ENST00000474323 GIMAP6Q6P9H5 292 aa17.35■□□□□ 0.37
SAMM50-203ENST00000474323 EYA1Q99502 592 aa17.35■□□□□ 0.37
SAMM50-203ENST00000474323 TERF2Q15554 542 aa17.34■□□□□ 0.37
SAMM50-203ENST00000474323 XIRP1Q702N8 1843 aaKnown RBP17.34■□□□□ 0.37
SAMM50-203ENST00000474323 CCDC192P0DO97 292 aa17.33■□□□□ 0.37
SAMM50-203ENST00000474323 CADPS2Q86UW7 1296 aa17.33■□□□□ 0.37
SAMM50-203ENST00000474323 IPO4Q8TEX9 1081 aaKnown RBP17.33■□□□□ 0.37
SAMM50-203ENST00000474323 ANO2Q9NQ90 1003 aa17.33■□□□□ 0.37
SAMM50-203ENST00000474323 ARHGEF10O15013 1369 aa17.33■□□□□ 0.37
SAMM50-203ENST00000474323 MSH6P52701 1360 aa17.33■□□□□ 0.37
SAMM50-203ENST00000474323 DCCP43146 1447 aa17.33■□□□□ 0.36
SAMM50-203ENST00000474323 KIF18AQ8NI77 898 aa17.33■□□□□ 0.36
SAMM50-203ENST00000474323 NFAT5O94916 1531 aa17.33■□□□□ 0.36
SAMM50-203ENST00000474323 TRPM3Q9HCF6 1732 aaPredicted RBP17.32■□□□□ 0.36
SAMM50-203ENST00000474323 FAM193AP78312 1265 aa17.32■□□□□ 0.36
SAMM50-203ENST00000474323 DCTN1Q14203 1278 aa17.32■□□□□ 0.36
SAMM50-203ENST00000474323 STX6O43752 255 aa17.32■□□□□ 0.36
SAMM50-203ENST00000474323 PTGS1P23219 599 aa17.32■□□□□ 0.36
SAMM50-203ENST00000474323 CHMLP26374 656 aa17.32■□□□□ 0.36
SAMM50-203ENST00000474323 KRT222Q8N1A0 295 aa17.32■□□□□ 0.36
SAMM50-203ENST00000474323 KCNH5Q8NCM2 988 aa17.32■□□□□ 0.36
SAMM50-203ENST00000474323 UPF3BQ9BZI7 483 aaKnown RBP17.32■□□□□ 0.36
SAMM50-203ENST00000474323 CCDC112Q8NEF3 446 aa17.31■□□□□ 0.36
SAMM50-203ENST00000474323 IGSF1Q8N6C5 1336 aa17.31■□□□□ 0.36
SAMM50-203ENST00000474323 TNNT1P13805 278 aa17.31■□□□□ 0.36
SAMM50-203ENST00000474323 FAM200AQ8TCP9 573 aa17.31■□□□□ 0.36
SAMM50-203ENST00000474323 MEIS3Q99687 375 aa17.31■□□□□ 0.36
SAMM50-203ENST00000474323 PTPRCP08575 1304 aa17.31■□□□□ 0.36
SAMM50-203ENST00000474323 F13A1P00488 732 aa17.3■□□□□ 0.36
SAMM50-203ENST00000474323 GCP02774 474 aa17.3■□□□□ 0.36
SAMM50-203ENST00000474323 SLC20A2Q08357 652 aa17.3■□□□□ 0.36
SAMM50-203ENST00000474323 SALL3Q9BXA9 1300 aa17.3■□□□□ 0.36
SAMM50-203ENST00000474323 KIAA0232Q92628 1395 aa17.3■□□□□ 0.36
SAMM50-203ENST00000474323 KCNJ4P48050 445 aa17.3■□□□□ 0.36
SAMM50-203ENST00000474323 C16orf45Q96MC5 204 aaPredicted RBP17.3■□□□□ 0.36
SAMM50-203ENST00000474323 TIGD1Q96MW7 591 aa17.3■□□□□ 0.36
SAMM50-203ENST00000474323 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.3■□□□□ 0.36
SAMM50-203ENST00000474323 FIBPO43427 364 aa17.29■□□□□ 0.36
SAMM50-203ENST00000474323 SYT1P21579 422 aa17.29■□□□□ 0.36
SAMM50-203ENST00000474323 IRX5P78411 483 aaPredicted RBP17.29■□□□□ 0.36
SAMM50-203ENST00000474323 KDRP35968 1356 aa17.29■□□□□ 0.36
SAMM50-203ENST00000474323 CREBRFQ8IUR6 639 aa17.29■□□□□ 0.36
SAMM50-203ENST00000474323 IP6K1Q92551 441 aa17.29■□□□□ 0.36
SAMM50-203ENST00000474323 HSPA4P34932 840 aa17.28■□□□□ 0.36
SAMM50-203ENST00000474323 CCDC186Q7Z3E2 898 aa17.28■□□□□ 0.36
SAMM50-203ENST00000474323 USHBP1Q8N6Y0 703 aa17.28■□□□□ 0.36
SAMM50-203ENST00000474323 ZNF397Q8NF99 534 aaPredicted RBP17.28■□□□□ 0.36
SAMM50-203ENST00000474323 FAM53CQ9NYF3 392 aa17.28■□□□□ 0.36
SAMM50-203ENST00000474323 ZBTB22O15209 634 aa17.27■□□□□ 0.36
SAMM50-203ENST00000474323 MTHFSDQ2M296 383 aaKnown RBP17.27■□□□□ 0.36
SAMM50-203ENST00000474323 MCM10Q7L590 875 aa17.27■□□□□ 0.36
SAMM50-203ENST00000474323 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.27■□□□□ 0.36
SAMM50-203ENST00000474323 CALCOCO1Q9P1Z2 691 aa17.27■□□□□ 0.36
SAMM50-203ENST00000474323 BCCIPQ9P287 314 aaKnown RBP eCLIP17.27■□□□□ 0.36
SAMM50-203ENST00000474323 TUBGCP6Q96RT7 1819 aa17.27■□□□□ 0.35
SAMM50-203ENST00000474323 DNAJC2Q99543 621 aaKnown RBP17.26■□□□□ 0.35
SAMM50-203ENST00000474323 KRT24Q2M2I5 525 aa17.26■□□□□ 0.35
SAMM50-203ENST00000474323 SLIT3O75094 1523 aa17.26■□□□□ 0.35
SAMM50-203ENST00000474323 TRIM6-TRIM34B2RNG4 842 aa17.25■□□□□ 0.35
SAMM50-203ENST00000474323 ZSCAN25Q6NSZ9 544 aa17.25■□□□□ 0.35
SAMM50-203ENST00000474323 RILPL2Q969X0 211 aa17.25■□□□□ 0.35
SAMM50-203ENST00000474323 SMC3Q9UQE7 1217 aa17.25■□□□□ 0.35
SAMM50-203ENST00000474323 NPHP3Q7Z494 1330 aa17.25■□□□□ 0.35
SAMM50-203ENST00000474323 ALS2Q96Q42 1657 aa17.25■□□□□ 0.35
SAMM50-203ENST00000474323 NAA30Q147X3 362 aaPredicted RBP17.25■□□□□ 0.35
SAMM50-203ENST00000474323 ARHGEF25Q86VW2 580 aa17.25■□□□□ 0.35
SAMM50-203ENST00000474323 LRRCC1Q9C099 1032 aa17.25■□□□□ 0.35
SAMM50-203ENST00000474323 LIMCH1Q9UPQ0 1083 aa17.25■□□□□ 0.35
SAMM50-203ENST00000474323 LRMPQ12912 555 aa17.24■□□□□ 0.35
SAMM50-203ENST00000474323 TTC14Q96N46 770 aa17.24■□□□□ 0.35
SAMM50-203ENST00000474323 STAP2Q9UGK3 403 aa17.24■□□□□ 0.35
SAMM50-203ENST00000474323 MAP3K11Q16584 847 aa17.24■□□□□ 0.35
SAMM50-203ENST00000474323 TPD52L1Q16890 204 aaPredicted RBP17.24■□□□□ 0.35
SAMM50-203ENST00000474323 DRC7Q8IY82 874 aa17.24■□□□□ 0.35
SAMM50-203ENST00000474323 VGLL3A8MV65 326 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms