RNA–Protein interactions for RNA: ENST00000473797.1

GPCPD1-204, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-204ENST00000473797 C1orf53Q5VUE5 145 aa8.51□□□□□ -1.05
GPCPD1-204ENST00000473797 BICDL1Q6ZP65 573 aa8.51□□□□□ -1.05
GPCPD1-204ENST00000473797 SIX5Q8N196 739 aa8.51□□□□□ -1.05
GPCPD1-204ENST00000473797 TPCN2Q8NHX9 752 aa8.51□□□□□ -1.05
GPCPD1-204ENST00000473797 MDFIQ99750 246 aa8.51□□□□□ -1.05
GPCPD1-204ENST00000473797 STRN4Q9NRL3 753 aa8.51□□□□□ -1.05
GPCPD1-204ENST00000473797 SERTM1A2A2V5 107 aa8.5□□□□□ -1.05
GPCPD1-204ENST00000473797 PALM3A6NDB9 673 aaPredicted RBP8.5□□□□□ -1.05
GPCPD1-204ENST00000473797 MKRN1Q9UHC7 482 aaKnown RBP8.5□□□□□ -1.05
GPCPD1-204ENST00000473797 PSMA6P60900 246 aaKnown RBP8.49□□□□□ -1.05
GPCPD1-204ENST00000473797 CHSY3Q70JA7 882 aa8.49□□□□□ -1.05
GPCPD1-204ENST00000473797 OGFOD1Q8N543 542 aa8.49□□□□□ -1.05
GPCPD1-204ENST00000473797 SUV39H2Q9H5I1 410 aa8.49□□□□□ -1.05
GPCPD1-204ENST00000473797 TMEM132AQ24JP5 1023 aa8.48□□□□□ -1.05
GPCPD1-204ENST00000473797 PRR12Q9ULL5 1215 aa8.48□□□□□ -1.05
GPCPD1-204ENST00000473797 ZNF232Q9UNY5 417 aa8.48□□□□□ -1.05
GPCPD1-204ENST00000473797 TBCELQ5QJ74 424 aa8.47□□□□□ -1.05
GPCPD1-204ENST00000473797 SH3PXD2AQ5TCZ1 1133 aa8.47□□□□□ -1.05
GPCPD1-204ENST00000473797 LRRC69Q6ZNQ3 347 aa8.47□□□□□ -1.05
GPCPD1-204ENST00000473797 TSPAN10Q9H1Z9 355 aaPredicted RBP8.47□□□□□ -1.05
GPCPD1-204ENST00000473797 NOP53Q9NZM5 478 aaKnown RBP8.47□□□□□ -1.05
GPCPD1-204ENST00000473797 ADARB2-AS1A8MUL3 147 aa8.46□□□□□ -1.06
GPCPD1-204ENST00000473797 ADAM23O75077 832 aa8.46□□□□□ -1.06
GPCPD1-204ENST00000473797 SIN3BO75182 1162 aa8.46□□□□□ -1.06
GPCPD1-204ENST00000473797 PCBP4P57723 403 aaKnown RBP8.46□□□□□ -1.06
GPCPD1-204ENST00000473797 STAG2Q8N3U4 1231 aa8.46□□□□□ -1.06
GPCPD1-204ENST00000473797 ELOA3CA0A087WX78 387 aaPredicted RBP8.45□□□□□ -1.06
GPCPD1-204ENST00000473797 ELOA3DA6NLF2 546 aaPredicted RBP8.45□□□□□ -1.06
GPCPD1-204ENST00000473797 KCNQ4P56696 695 aa8.45□□□□□ -1.06
GPCPD1-204ENST00000473797 GRIN2CQ14957 1233 aa8.45□□□□□ -1.06
GPCPD1-204ENST00000473797 ELOA3BQ3SY89 546 aa8.45□□□□□ -1.06
GPCPD1-204ENST00000473797 ELOA3Q8NG57 546 aa8.45□□□□□ -1.06
GPCPD1-204ENST00000473797 GAS2L2Q8NHY3 880 aa8.45□□□□□ -1.06
GPCPD1-204ENST00000473797 NEUROD4Q9HD90 331 aa8.45□□□□□ -1.06
GPCPD1-204ENST00000473797 ANKIB1Q9P2G1 1089 aa8.45□□□□□ -1.06
GPCPD1-204ENST00000473797 C21orf2O43822 256 aa8.44□□□□□ -1.06
GPCPD1-204ENST00000473797 SYT9Q86SS6 491 aa8.44□□□□□ -1.06
GPCPD1-204ENST00000473797 PROSER2Q86WR7 435 aaPredicted RBP8.44□□□□□ -1.06
GPCPD1-204ENST00000473797 RHPN1Q8TCX5 695 aa8.44□□□□□ -1.06
GPCPD1-204ENST00000473797 CLUAP1Q96AJ1 413 aa8.44□□□□□ -1.06
GPCPD1-204ENST00000473797 BAG6P46379 1132 aa8.43□□□□□ -1.06
GPCPD1-204ENST00000473797 SFSWAPQ12872 951 aaKnown RBP8.43□□□□□ -1.06
GPCPD1-204ENST00000473797 GLMNQ92990 594 aa8.43□□□□□ -1.06
GPCPD1-204ENST00000473797 TNFRSF25Q93038 417 aa8.43□□□□□ -1.06
GPCPD1-204ENST00000473797 TFIP11Q9UBB9 837 aaKnown RBP8.43□□□□□ -1.06
GPCPD1-204ENST00000473797 CHMP3Q9Y3E7 222 aa8.43□□□□□ -1.06
GPCPD1-204ENST00000473797 MAFBQ9Y5Q3 323 aaPredicted RBP8.43□□□□□ -1.06
GPCPD1-204ENST00000473797 A6NJR5 290 aa8.42□□□□□ -1.06
GPCPD1-204ENST00000473797 TSEN2Q8NCE0 465 aaKnown RBP8.42□□□□□ -1.06
GPCPD1-204ENST00000473797 TRIM11Q96F44 468 aa8.42□□□□□ -1.06
GPCPD1-204ENST00000473797 PHACTR1Q9C0D0 580 aa8.42□□□□□ -1.06
GPCPD1-204ENST00000473797 HCN4Q9Y3Q4 1203 aa8.42□□□□□ -1.06
GPCPD1-204ENST00000473797 ATAD2Q6PL18 1390 aa8.41□□□□□ -1.06
GPCPD1-204ENST00000473797 SFI1A8K8P3 1242 aa8.41□□□□□ -1.06
GPCPD1-204ENST00000473797 ALAS2P22557 587 aa8.41□□□□□ -1.06
GPCPD1-204ENST00000473797 CD163Q86VB7 1156 aa8.41□□□□□ -1.06
GPCPD1-204ENST00000473797 SLC30A3Q99726 388 aa8.41□□□□□ -1.06
GPCPD1-204ENST00000473797 C2orf49Q9BVC5 232 aaPredicted RBP8.41□□□□□ -1.06
GPCPD1-204ENST00000473797 PRDM6Q9NQX0 595 aa8.41□□□□□ -1.06
GPCPD1-204ENST00000473797 C1QTNF9BB2RNN3 333 aa8.4□□□□□ -1.06
GPCPD1-204ENST00000473797 RASA1P20936 1047 aa8.4□□□□□ -1.06
GPCPD1-204ENST00000473797 SEC13P55735 322 aa8.4□□□□□ -1.06
GPCPD1-204ENST00000473797 ZNF594Q96JF6 807 aaPredicted RBP8.4□□□□□ -1.06
GPCPD1-204ENST00000473797 SUSD3Q96L08 255 aa8.4□□□□□ -1.06
GPCPD1-204ENST00000473797 RBM19Q9Y4C8 960 aaKnown RBP8.4□□□□□ -1.06
GPCPD1-204ENST00000473797 PPP1R12BO60237 982 aaPredicted RBP8.39□□□□□ -1.07
GPCPD1-204ENST00000473797 TYRO3Q06418 890 aa8.39□□□□□ -1.07
GPCPD1-204ENST00000473797 SPEM2Q0P670 501 aa8.39□□□□□ -1.07
GPCPD1-204ENST00000473797 COL9A3Q14050 684 aaPredicted RBP8.39□□□□□ -1.07
GPCPD1-204ENST00000473797 KANK4Q5T7N3 995 aaPredicted RBP8.39□□□□□ -1.07
GPCPD1-204ENST00000473797 ALDH16A1Q8IZ83 802 aa8.39□□□□□ -1.07
GPCPD1-204ENST00000473797 ZNF280CQ8ND82 737 aa8.39□□□□□ -1.07
GPCPD1-204ENST00000473797 BRD7Q9NPI1 651 aa8.39□□□□□ -1.07
GPCPD1-204ENST00000473797 PTK7Q13308 1070 aa8.38□□□□□ -1.07
GPCPD1-204ENST00000473797 HIF1AQ16665 826 aa8.38□□□□□ -1.07
GPCPD1-204ENST00000473797 HSH2DQ96JZ2 352 aa8.38□□□□□ -1.07
GPCPD1-204ENST00000473797 PLVAPQ9BX97 442 aa8.38□□□□□ -1.07
GPCPD1-204ENST00000473797 PPP1R12CQ9BZL4 782 aa8.38□□□□□ -1.07
GPCPD1-204ENST00000473797 KCNH4Q9UQ05 1017 aa8.38□□□□□ -1.07
GPCPD1-204ENST00000473797 STARD13Q9Y3M8 1113 aa8.38□□□□□ -1.07
GPCPD1-204ENST00000473797 K7ELQ4 463 aaPredicted RBP8.37□□□□□ -1.07
GPCPD1-204ENST00000473797 SPATA31C1P0DKV0 1188 aa8.37□□□□□ -1.07
GPCPD1-204ENST00000473797 CHRNA4P43681 627 aa8.37□□□□□ -1.07
GPCPD1-204ENST00000473797 NEUROD1Q13562 356 aa8.37□□□□□ -1.07
GPCPD1-204ENST00000473797 CEP63Q96MT8 703 aa8.37□□□□□ -1.07
GPCPD1-204ENST00000473797 EFCC1Q9HA90 598 aa8.37□□□□□ -1.07
GPCPD1-204ENST00000473797 IER5Q5VY09 327 aa8.36□□□□□ -1.07
GPCPD1-204ENST00000473797 LARP1Q6PKG0 1096 aaKnown RBP8.36□□□□□ -1.07
GPCPD1-204ENST00000473797 SCG3Q8WXD2 468 aaKnown RBP8.36□□□□□ -1.07
GPCPD1-204ENST00000473797 SPDYE3A6NKU9 549 aa8.35□□□□□ -1.07
GPCPD1-204ENST00000473797 FAM196BA6NMK8 535 aa8.35□□□□□ -1.07
GPCPD1-204ENST00000473797 CRTC2Q53ET0 693 aaPredicted RBP8.35□□□□□ -1.07
GPCPD1-204ENST00000473797 C20orf204Q6ZNR8 217 aa8.35□□□□□ -1.07
GPCPD1-204ENST00000473797 BTLAQ7Z6A9 289 aa8.35□□□□□ -1.07
GPCPD1-204ENST00000473797 MICALL1Q8N3F8 863 aa8.35□□□□□ -1.07
GPCPD1-204ENST00000473797 CALR3Q96L12 384 aaKnown RBP8.35□□□□□ -1.07
GPCPD1-204ENST00000473797 IGFBP4P22692 258 aa8.34□□□□□ -1.07
GPCPD1-204ENST00000473797 M0R082 166 aa8.33□□□□□ -1.08
GPCPD1-204ENST00000473797 FURINP09958 794 aa8.33□□□□□ -1.08
GPCPD1-204ENST00000473797 ADH7P40394 386 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms