RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 AFDNP55196 1824 aaKnown RBP9.64□□□□□ -0.87
HDAC3-206ENST00000471968 FZD9O00144 591 aa9.64□□□□□ -0.87
HDAC3-206ENST00000471968 HOXC9P31274 260 aa9.64□□□□□ -0.87
HDAC3-206ENST00000471968 SOGA3Q5TF21 947 aa9.64□□□□□ -0.87
HDAC3-206ENST00000471968 RGMBQ6NW40 437 aa9.64□□□□□ -0.87
HDAC3-206ENST00000471968 CSRNP1Q96S65 589 aa9.64□□□□□ -0.87
HDAC3-206ENST00000471968 STXBP5LQ9Y2K9 1186 aa9.64□□□□□ -0.87
HDAC3-206ENST00000471968 KIAA0100Q14667 2235 aaKnown RBP9.64□□□□□ -0.87
HDAC3-206ENST00000471968 ERBB4Q15303 1308 aa9.63□□□□□ -0.87
HDAC3-206ENST00000471968 CRKLP46109 303 aaKnown RBP9.63□□□□□ -0.87
HDAC3-206ENST00000471968 AMPHP49418 695 aa9.63□□□□□ -0.87
HDAC3-206ENST00000471968 SCNN1DP51172 638 aa9.63□□□□□ -0.87
HDAC3-206ENST00000471968 PRPF40BQ6NWY9 871 aaKnown RBP9.63□□□□□ -0.87
HDAC3-206ENST00000471968 CCDC102AQ96A19 550 aa9.63□□□□□ -0.87
HDAC3-206ENST00000471968 PAPPA2Q9BXP8 1791 aa9.63□□□□□ -0.87
HDAC3-206ENST00000471968 TBC1D8O95759 1140 aa9.62□□□□□ -0.87
HDAC3-206ENST00000471968 ZNF157P51786 506 aaPredicted RBP9.62□□□□□ -0.87
HDAC3-206ENST00000471968 NKX1-1Q15270 411 aaPredicted RBP9.62□□□□□ -0.87
HDAC3-206ENST00000471968 TTC28Q96AY4 2481 aa9.62□□□□□ -0.87
HDAC3-206ENST00000471968 AKAP11Q9UKA4 1901 aa9.62□□□□□ -0.87
HDAC3-206ENST00000471968 COL5A3P25940 1745 aaPredicted RBP9.62□□□□□ -0.87
HDAC3-206ENST00000471968 NRXN2Q9P2S2 1712 aa9.62□□□□□ -0.87
HDAC3-206ENST00000471968 MYH14Q7Z406 1995 aaKnown RBP9.61□□□□□ -0.87
HDAC3-206ENST00000471968 PDE6BP35913 854 aa9.61□□□□□ -0.87
HDAC3-206ENST00000471968 FKBP4Q02790 459 aaKnown RBP eCLIP9.61□□□□□ -0.87
HDAC3-206ENST00000471968 CCDC93Q567U6 631 aa9.61□□□□□ -0.87
HDAC3-206ENST00000471968 DEFB123Q8N688 67 aa9.61□□□□□ -0.87
HDAC3-206ENST00000471968 CNKSR1Q969H4 720 aa9.61□□□□□ -0.87
HDAC3-206ENST00000471968 LOC105371045A0A1W2PR82 267 aa9.6□□□□□ -0.87
HDAC3-206ENST00000471968 ANKRD13DQ6ZTN6 518 aa9.6□□□□□ -0.87
HDAC3-206ENST00000471968 PDZRN3Q9UPQ7 1066 aa9.6□□□□□ -0.87
HDAC3-206ENST00000471968 MON2Q7Z3U7 1717 aa9.59□□□□□ -0.87
HDAC3-206ENST00000471968 SLX4Q8IY92 1834 aa9.59□□□□□ -0.87
HDAC3-206ENST00000471968 FBLN1P23142 703 aa9.59□□□□□ -0.87
HDAC3-206ENST00000471968 IARSP41252 1262 aaKnown RBP9.59□□□□□ -0.87
HDAC3-206ENST00000471968 EIF6P56537 245 aaKnown RBP9.59□□□□□ -0.87
HDAC3-206ENST00000471968 Q7L0L9 218 aa9.59□□□□□ -0.87
HDAC3-206ENST00000471968 BRIP1Q9BX63 1249 aa9.59□□□□□ -0.87
HDAC3-206ENST00000471968 PRO3102Q9H379 93 aa9.59□□□□□ -0.87
HDAC3-206ENST00000471968 EYSQ5T1H1 3165 aa9.59□□□□□ -0.87
HDAC3-206ENST00000471968 COL11A2P13942 1736 aaPredicted RBP9.59□□□□□ -0.87
HDAC3-206ENST00000471968 EVC2Q86UK5 1308 aa9.58□□□□□ -0.88
HDAC3-206ENST00000471968 GPR25O00155 361 aa9.58□□□□□ -0.88
HDAC3-206ENST00000471968 JDP2Q8WYK2 163 aa9.58□□□□□ -0.88
HDAC3-206ENST00000471968 ADARB2Q9NS39 739 aaKnown RBP9.58□□□□□ -0.88
HDAC3-206ENST00000471968 SBNO2Q9Y2G9 1366 aa9.58□□□□□ -0.88
HDAC3-206ENST00000471968 SLC10A3P09131 477 aa9.57□□□□□ -0.88
HDAC3-206ENST00000471968 STYK1Q6J9G0 422 aa9.57□□□□□ -0.88
HDAC3-206ENST00000471968 DLK2Q6UY11 383 aa9.57□□□□□ -0.88
HDAC3-206ENST00000471968 CDC37L1Q7L3B6 337 aa9.57□□□□□ -0.88
HDAC3-206ENST00000471968 ZNF831Q5JPB2 1677 aa9.57□□□□□ -0.88
HDAC3-206ENST00000471968 RBBP6Q7Z6E9 1792 aaKnown RBP9.57□□□□□ -0.88
HDAC3-206ENST00000471968 PTCD1O75127 700 aaKnown RBP9.56□□□□□ -0.88
HDAC3-206ENST00000471968 OLFM4Q6UX06 510 aa9.56□□□□□ -0.88
HDAC3-206ENST00000471968 REM2Q8IYK8 340 aaPredicted RBP9.56□□□□□ -0.88
HDAC3-206ENST00000471968 C7orf43Q8WVR3 580 aa9.56□□□□□ -0.88
HDAC3-206ENST00000471968 DPF3Q92784 378 aa9.56□□□□□ -0.88
HDAC3-206ENST00000471968 TMEM106CQ9BVX2 250 aa9.56□□□□□ -0.88
HDAC3-206ENST00000471968 BCL2L12Q9HB09 334 aa9.56□□□□□ -0.88
HDAC3-206ENST00000471968 GBA2Q9HCG7 927 aaPredicted RBP9.56□□□□□ -0.88
HDAC3-206ENST00000471968 CACNA1SQ13698 1873 aa9.55□□□□□ -0.88
HDAC3-206ENST00000471968 ANKRD31Q8N7Z5 1873 aa9.55□□□□□ -0.88
HDAC3-206ENST00000471968 TMEM265A0A087WTH1 108 aa9.55□□□□□ -0.88
HDAC3-206ENST00000471968 FKTNO75072 461 aa9.55□□□□□ -0.88
HDAC3-206ENST00000471968 SRGNP10124 158 aa9.55□□□□□ -0.88
HDAC3-206ENST00000471968 INTS5Q6P9B9 1019 aaKnown RBP9.55□□□□□ -0.88
HDAC3-206ENST00000471968 USP48Q86UV5 1035 aa9.55□□□□□ -0.88
HDAC3-206ENST00000471968 C2orf69Q8N8R5 385 aa9.55□□□□□ -0.88
HDAC3-206ENST00000471968 NARFQ9UHQ1 456 aa9.55□□□□□ -0.88
HDAC3-206ENST00000471968 SPG7Q9UQ90 795 aa9.55□□□□□ -0.88
HDAC3-206ENST00000471968 TRIM17Q9Y577 477 aa9.55□□□□□ -0.88
HDAC3-206ENST00000471968 LAMA2P24043 3122 aaKnown RBP9.55□□□□□ -0.88
HDAC3-206ENST00000471968 LAMB4A4D0S4 1761 aa9.55□□□□□ -0.88
HDAC3-206ENST00000471968 BCORQ6W2J9 1755 aa9.55□□□□□ -0.88
HDAC3-206ENST00000471968 A0A1W2PPC1 479 aa9.54□□□□□ -0.88
HDAC3-206ENST00000471968 PRR5LQ6MZQ0 368 aa9.54□□□□□ -0.88
HDAC3-206ENST00000471968 MASTLQ96GX5 879 aa9.54□□□□□ -0.88
HDAC3-206ENST00000471968 STAC3Q96MF2 364 aa9.54□□□□□ -0.88
HDAC3-206ENST00000471968 MTMR10Q9NXD2 777 aa9.54□□□□□ -0.88
HDAC3-206ENST00000471968 GPRC5DQ9NZD1 345 aa9.54□□□□□ -0.88
HDAC3-206ENST00000471968 PGAP2Q9UHJ9 254 aa9.54□□□□□ -0.88
HDAC3-206ENST00000471968 PRUNE2Q8WUY3 3088 aa9.54□□□□□ -0.88
HDAC3-206ENST00000471968 NOM1Q5C9Z4 860 aaKnown RBP9.53□□□□□ -0.88
HDAC3-206ENST00000471968 RTKN2Q8IZC4 609 aa9.53□□□□□ -0.88
HDAC3-206ENST00000471968 SOS1Q07889 1333 aaPredicted RBP9.53□□□□□ -0.88
HDAC3-206ENST00000471968 PHKG2P15735 406 aa9.52□□□□□ -0.89
HDAC3-206ENST00000471968 RRS1Q15050 365 aaKnown RBP9.52□□□□□ -0.89
HDAC3-206ENST00000471968 GPR153Q6NV75 609 aa9.52□□□□□ -0.89
HDAC3-206ENST00000471968 OTOP1Q7RTM1 612 aa9.52□□□□□ -0.89
HDAC3-206ENST00000471968 IFNL2Q8IZJ0 200 aa9.52□□□□□ -0.89
HDAC3-206ENST00000471968 ARMC5Q96C12 935 aa9.52□□□□□ -0.89
HDAC3-206ENST00000471968 COL4A5P29400 1685 aa9.51□□□□□ -0.89
HDAC3-206ENST00000471968 RTL1A6NKG5 1358 aa9.51□□□□□ -0.89
HDAC3-206ENST00000471968 NPHP1O15259 732 aa9.51□□□□□ -0.89
HDAC3-206ENST00000471968 HIRAP54198 1017 aaPredicted RBP9.51□□□□□ -0.89
HDAC3-206ENST00000471968 MAP3K12Q12852 859 aa9.51□□□□□ -0.89
HDAC3-206ENST00000471968 RASAL3Q86YV0 1011 aa9.51□□□□□ -0.89
HDAC3-206ENST00000471968 ZC3H15Q8WU90 426 aaKnown RBP9.51□□□□□ -0.89
HDAC3-206ENST00000471968 PIEZO1Q92508 2521 aa9.51□□□□□ -0.89
HDAC3-206ENST00000471968 COL15A1P39059 1388 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms