RNA–Protein interactions for RNA: ENST00000471894.1

PUM1-208, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-208	ENST00000471894	EIF5	P55010	431 aa	Known RBP	13.34	□□□□□ -0.27
PUM1-208	ENST00000471894	EN1	Q05925	392 aa	Predicted RBP	13.34	□□□□□ -0.27
PUM1-208	ENST00000471894	MVP	Q14764	893 aa	Known RBP	13.34	□□□□□ -0.27
PUM1-208	ENST00000471894	INTS3	Q68E01	1043 aa	Known RBP	13.34	□□□□□ -0.27
PUM1-208	ENST00000471894	CCDC125	Q86Z20	511 aa		13.34	□□□□□ -0.27
PUM1-208	ENST00000471894	AK7	Q96M32	723 aa		13.34	□□□□□ -0.27
PUM1-208	ENST00000471894	TAF1L	Q8IZX4	1826 aa		13.34	□□□□□ -0.27
PUM1-208	ENST00000471894		A0A087WZG4	1122 aa		13.33	□□□□□ -0.28
PUM1-208	ENST00000471894	GNPAT	O15228	680 aa		13.33	□□□□□ -0.28
PUM1-208	ENST00000471894	CCT4	P50991	539 aa	Known RBP	13.33	□□□□□ -0.28
PUM1-208	ENST00000471894	DZIP3	Q86Y13	1208 aa	Known RBP	13.33	□□□□□ -0.28
PUM1-208	ENST00000471894	TBC1D2B	Q9UPU7	963 aa		13.33	□□□□□ -0.28
PUM1-208	ENST00000471894	RTCB	Q9Y3I0	505 aa	Known RBP	13.33	□□□□□ -0.28
PUM1-208	ENST00000471894	ADCY9	O60503	1353 aa		13.32	□□□□□ -0.28
PUM1-208	ENST00000471894	NEXN	Q0ZGT2	675 aa		13.32	□□□□□ -0.28
PUM1-208	ENST00000471894	EZH2	Q15910	746 aa	Known RBP	13.32	□□□□□ -0.28
PUM1-208	ENST00000471894	ERICH6B	Q5W0A0	696 aa		13.32	□□□□□ -0.28
PUM1-208	ENST00000471894	CAMKK2	Q96RR4	588 aa		13.32	□□□□□ -0.28
PUM1-208	ENST00000471894	METTL22	Q9BUU2	404 aa	Predicted RBP	13.32	□□□□□ -0.28
PUM1-208	ENST00000471894	ZBTB3	Q9H5J0	574 aa		13.32	□□□□□ -0.28
PUM1-208	ENST00000471894	DDX19B	Q9UMR2	479 aa		13.32	□□□□□ -0.28
PUM1-208	ENST00000471894	RREB1	Q92766	1687 aa		13.31	□□□□□ -0.28
PUM1-208	ENST00000471894	C4B	P0C0L5	1744 aa		13.31	□□□□□ -0.28
PUM1-208	ENST00000471894	BEND3	Q5T5X7	828 aa		13.31	□□□□□ -0.28
PUM1-208	ENST00000471894	MYD88	Q99836	296 aa		13.31	□□□□□ -0.28
PUM1-208	ENST00000471894	SRCIN1	Q9C0H9	1055 aa		13.31	□□□□□ -0.28
PUM1-208	ENST00000471894	CHMP4B	Q9H444	224 aa	Known RBP	13.31	□□□□□ -0.28
PUM1-208	ENST00000471894	MAP3K15	Q6ZN16	1313 aa		13.31	□□□□□ -0.28
PUM1-208	ENST00000471894	ERVV-1	B6SEH8	477 aa		13.3	□□□□□ -0.28
PUM1-208	ENST00000471894	TRAPPC3L	Q5T215	181 aa		13.3	□□□□□ -0.28
PUM1-208	ENST00000471894	SMIM5	Q71RC9	77 aa		13.3	□□□□□ -0.28
PUM1-208	ENST00000471894	DEFB132	Q7Z7B7	95 aa		13.3	□□□□□ -0.28
PUM1-208	ENST00000471894	COL15A1	P39059	1388 aa		13.3	□□□□□ -0.28
PUM1-208	ENST00000471894	ZBTB7B	O15156	539 aa	Predicted RBP	13.29	□□□□□ -0.28
PUM1-208	ENST00000471894	ALDH1L1	O75891	902 aa		13.29	□□□□□ -0.28
PUM1-208	ENST00000471894	PHF14	O94880	888 aa		13.29	□□□□□ -0.28
PUM1-208	ENST00000471894	LINS1	Q8NG48	757 aa		13.29	□□□□□ -0.28
PUM1-208	ENST00000471894	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.29	□□□□□ -0.28
PUM1-208	ENST00000471894	RGPD4	Q7Z3J3	1758 aa		13.29	□□□□□ -0.28
PUM1-208	ENST00000471894	ATP5J2-PTCD1	G3V325	749 aa		13.28	□□□□□ -0.28
PUM1-208	ENST00000471894	ZPR1	O75312	459 aa		13.28	□□□□□ -0.28
PUM1-208	ENST00000471894	RFC4	P35249	363 aa		13.28	□□□□□ -0.28
PUM1-208	ENST00000471894	TCIRG1	Q13488	830 aa		13.28	□□□□□ -0.28
PUM1-208	ENST00000471894	HLF	Q16534	295 aa		13.28	□□□□□ -0.28
PUM1-208	ENST00000471894	CWF19L2	Q2TBE0	894 aa	Known RBP	13.28	□□□□□ -0.28
PUM1-208	ENST00000471894	HSP90AB3P	Q58FF7	597 aa		13.28	□□□□□ -0.28
PUM1-208	ENST00000471894	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.28	□□□□□ -0.28
PUM1-208	ENST00000471894	ARHGEF1	Q92888	912 aa	Known RBP	13.28	□□□□□ -0.28
PUM1-208	ENST00000471894	TFCP2L1	Q9NZI6	479 aa		13.28	□□□□□ -0.28
PUM1-208	ENST00000471894	PXDNL	A1KZ92	1463 aa		13.28	□□□□□ -0.28
PUM1-208	ENST00000471894	ARFGEF2	Q9Y6D5	1785 aa		13.27	□□□□□ -0.28
PUM1-208	ENST00000471894	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.27	□□□□□ -0.29
PUM1-208	ENST00000471894	NEURL1B	A8MQ27	555 aa		13.27	□□□□□ -0.29
PUM1-208	ENST00000471894	CAMTA2	O94983	1202 aa		13.27	□□□□□ -0.29
PUM1-208	ENST00000471894	IGKV5-2	P06315	115 aa		13.27	□□□□□ -0.29
PUM1-208	ENST00000471894	KCNA4	P22459	653 aa		13.27	□□□□□ -0.29
PUM1-208	ENST00000471894	AAMP	Q13685	434 aa		13.27	□□□□□ -0.29
PUM1-208	ENST00000471894	AMIGO3	Q86WK7	504 aa		13.27	□□□□□ -0.29
PUM1-208	ENST00000471894	AKT1S1	Q96B36	256 aa		13.27	□□□□□ -0.29
PUM1-208	ENST00000471894	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.27	□□□□□ -0.29
PUM1-208	ENST00000471894	NARF	Q9UHQ1	456 aa		13.27	□□□□□ -0.29
PUM1-208	ENST00000471894	ATP10D	Q9P241	1426 aa		13.27	□□□□□ -0.29
PUM1-208	ENST00000471894	GNAI3	P08754	354 aa		13.26	□□□□□ -0.29
PUM1-208	ENST00000471894	SSFA2	P28290	1259 aa		13.26	□□□□□ -0.29
PUM1-208	ENST00000471894	ZNF827	Q17R98	1081 aa		13.26	□□□□□ -0.29
PUM1-208	ENST00000471894	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
PUM1-208	ENST00000471894	MEIS3	Q99687	375 aa		13.26	□□□□□ -0.29
PUM1-208	ENST00000471894	USP44	Q9H0E7	712 aa		13.26	□□□□□ -0.29
PUM1-208	ENST00000471894	ZBTB40	Q9NUA8	1239 aa		13.26	□□□□□ -0.29
PUM1-208	ENST00000471894	PPP4R2	Q9NY27	417 aa		13.26	□□□□□ -0.29
PUM1-208	ENST00000471894	ZNF652	Q9Y2D9	606 aa		13.26	□□□□□ -0.29
PUM1-208	ENST00000471894	NUP98	P52948	1817 aa		13.25	□□□□□ -0.29
PUM1-208	ENST00000471894	NUP188	Q5SRE5	1749 aa		13.25	□□□□□ -0.29
PUM1-208	ENST00000471894	GCKR	Q14397	625 aa		13.25	□□□□□ -0.29
PUM1-208	ENST00000471894	USPL1	Q5W0Q7	1092 aa		13.25	□□□□□ -0.29
PUM1-208	ENST00000471894	CLEC4G	Q6UXB4	293 aa		13.25	□□□□□ -0.29
PUM1-208	ENST00000471894	CCDC191	Q8NCU4	936 aa		13.25	□□□□□ -0.29
PUM1-208	ENST00000471894	FLAD1	Q8NFF5	587 aa		13.25	□□□□□ -0.29
PUM1-208	ENST00000471894	ISCA1	Q9BUE6	129 aa		13.25	□□□□□ -0.29
PUM1-208	ENST00000471894	CWC25	Q9NXE8	425 aa	Predicted RBP	13.25	□□□□□ -0.29
PUM1-208	ENST00000471894	STK32B	Q9NY57	414 aa		13.25	□□□□□ -0.29
PUM1-208	ENST00000471894	SRP68	Q9UHB9	627 aa	Known RBP	13.25	□□□□□ -0.29
PUM1-208	ENST00000471894	UBR3	Q6ZT12	1888 aa		13.25	□□□□□ -0.29
PUM1-208	ENST00000471894	UBTFL1	P0CB47	393 aa	Predicted RBP	13.24	□□□□□ -0.29
PUM1-208	ENST00000471894	GPT	P24298	496 aa		13.24	□□□□□ -0.29
PUM1-208	ENST00000471894	TRIM28	Q13263	835 aa	Known RBP	13.24	□□□□□ -0.29
PUM1-208	ENST00000471894	AFDN	P55196	1824 aa	Known RBP	13.23	□□□□□ -0.29
PUM1-208	ENST00000471894	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.23	□□□□□ -0.29
PUM1-208	ENST00000471894	GRM8	O00222	908 aa		13.23	□□□□□ -0.29
PUM1-208	ENST00000471894	RGL2	O15211	777 aa		13.23	□□□□□ -0.29
PUM1-208	ENST00000471894	GNAI2	P04899	355 aa		13.23	□□□□□ -0.29
PUM1-208	ENST00000471894	SLC15A2	Q16348	729 aa		13.23	□□□□□ -0.29
PUM1-208	ENST00000471894	ZNF34	Q8IZ26	560 aa		13.23	□□□□□ -0.29
PUM1-208	ENST00000471894	HDAC5	Q9UQL6	1122 aa		13.23	□□□□□ -0.29
PUM1-208	ENST00000471894	USP42	Q9H9J4	1324 aa	Known RBP	13.22	□□□□□ -0.29
PUM1-208	ENST00000471894	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.22	□□□□□ -0.29
PUM1-208	ENST00000471894	BICDL1	Q6ZP65	573 aa		13.22	□□□□□ -0.29
PUM1-208	ENST00000471894	ILDR2	Q71H61	639 aa		13.22	□□□□□ -0.29
PUM1-208	ENST00000471894	NLRP10	Q86W26	655 aa		13.22	□□□□□ -0.29
PUM1-208	ENST00000471894	COL23A1	Q86Y22	540 aa	Predicted RBP	13.22	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms