RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 LRP10Q7Z4F1 713 aa19.47■□□□□ 0.71
SNX13-205ENST00000471744 TSPYL6Q8N831 410 aa19.47■□□□□ 0.71
SNX13-205ENST00000471744 BCL2L12Q9HB09 334 aa19.47■□□□□ 0.71
SNX13-205ENST00000471744 PARP3Q9Y6F1 533 aa19.47■□□□□ 0.71
SNX13-205ENST00000471744 MAP3K15Q6ZN16 1313 aa19.47■□□□□ 0.71
SNX13-205ENST00000471744 TM4SF1P30408 202 aa19.46■□□□□ 0.71
SNX13-205ENST00000471744 EXOSC9Q06265 439 aaKnown RBP19.46■□□□□ 0.71
SNX13-205ENST00000471744 STK31Q9BXU1 1019 aa19.46■□□□□ 0.71
SNX13-205ENST00000471744 PROSER3Q2NL68 480 aa19.45■□□□□ 0.7
SNX13-205ENST00000471744 ANXA1P04083 346 aa19.44■□□□□ 0.7
SNX13-205ENST00000471744 NFIXQ14938 502 aa19.44■□□□□ 0.7
SNX13-205ENST00000471744 AFDNP55196 1824 aaKnown RBP19.44■□□□□ 0.7
SNX13-205ENST00000471744 VAMP4O75379 141 aa19.43■□□□□ 0.7
SNX13-205ENST00000471744 KCNA4P22459 653 aa19.43■□□□□ 0.7
SNX13-205ENST00000471744 TTLL7Q6ZT98 887 aa19.43■□□□□ 0.7
SNX13-205ENST00000471744 COPS6Q7L5N1 327 aa19.43■□□□□ 0.7
SNX13-205ENST00000471744 XAGE3Q8WTP9 111 aa19.43■□□□□ 0.7
SNX13-205ENST00000471744 KIF13BQ9NQT8 1826 aa19.43■□□□□ 0.7
SNX13-205ENST00000471744 CARMIL3Q8ND23 1372 aa19.43■□□□□ 0.7
SNX13-205ENST00000471744 NRXN2Q9P2S2 1712 aa19.42■□□□□ 0.7
SNX13-205ENST00000471744 POLRMTO00411 1230 aaKnown RBP19.42■□□□□ 0.7
SNX13-205ENST00000471744 TBC1D9BQ66K14 1250 aa19.42■□□□□ 0.7
SNX13-205ENST00000471744 TRMT2AQ8IZ69 625 aaKnown RBP19.42■□□□□ 0.7
SNX13-205ENST00000471744 SETDB2Q96T68 719 aa19.42■□□□□ 0.7
SNX13-205ENST00000471744 FHDC1Q9C0D6 1143 aaPredicted RBP19.42■□□□□ 0.7
SNX13-205ENST00000471744 CD2APQ9Y5K6 639 aa19.42■□□□□ 0.7
SNX13-205ENST00000471744 ZBED9Q6R2W3 1325 aa19.42■□□□□ 0.7
SNX13-205ENST00000471744 DDR1Q08345 913 aa19.41■□□□□ 0.7
SNX13-205ENST00000471744 AIMP1Q12904 312 aaKnown RBP19.41■□□□□ 0.7
SNX13-205ENST00000471744 GIGYF2Q6Y7W6 1299 aaKnown RBP19.41■□□□□ 0.7
SNX13-205ENST00000471744 ATP10DQ9P241 1426 aa19.41■□□□□ 0.7
SNX13-205ENST00000471744 ANKRD36CQ5JPF3 1778 aa19.4■□□□□ 0.7
SNX13-205ENST00000471744 HSP90AB3PQ58FF7 597 aa19.4■□□□□ 0.7
SNX13-205ENST00000471744 BICDL1Q6ZP65 573 aa19.4■□□□□ 0.7
SNX13-205ENST00000471744 PLBD2Q8NHP8 589 aa19.4■□□□□ 0.7
SNX13-205ENST00000471744 ZNF428Q96B54 188 aa19.4■□□□□ 0.7
SNX13-205ENST00000471744 CDCA7LQ96GN5 454 aa19.4■□□□□ 0.7
SNX13-205ENST00000471744 ZBTB3Q9H5J0 574 aa19.4■□□□□ 0.7
SNX13-205ENST00000471744 DDX58O95786 925 aaKnown RBP19.39■□□□□ 0.69
SNX13-205ENST00000471744 SERPINB2P05120 415 aa19.39■□□□□ 0.69
SNX13-205ENST00000471744 CT47B1P0C2W7 299 aaPredicted RBP19.39■□□□□ 0.69
SNX13-205ENST00000471744 HLFQ16534 295 aa19.39■□□□□ 0.69
SNX13-205ENST00000471744 ANKRD13DQ6ZTN6 518 aa19.39■□□□□ 0.69
SNX13-205ENST00000471744 KLHL34Q8N239 644 aa19.39■□□□□ 0.69
SNX13-205ENST00000471744 SYT17Q9BSW7 474 aa19.39■□□□□ 0.69
SNX13-205ENST00000471744 NIP7Q9Y221 180 aaKnown RBP eCLIP19.39■□□□□ 0.69
SNX13-205ENST00000471744 C10orf71Q711Q0 1435 aa19.39■□□□□ 0.69
SNX13-205ENST00000471744 ARFGEF2Q9Y6D5 1785 aa19.37■□□□□ 0.69
SNX13-205ENST00000471744 SLC4A2P04920 1241 aa19.37■□□□□ 0.69
SNX13-205ENST00000471744 PARP10Q53GL7 1025 aa19.36■□□□□ 0.69
SNX13-205ENST00000471744 PHAXQ9H814 394 aaKnown RBP19.36■□□□□ 0.69
SNX13-205ENST00000471744 IBTKQ9P2D0 1353 aaPredicted RBP19.35■□□□□ 0.69
SNX13-205ENST00000471744 NPHP1O15259 732 aa19.35■□□□□ 0.69
SNX13-205ENST00000471744 TGFB2P61812 414 aa19.35■□□□□ 0.69
SNX13-205ENST00000471744 TPTE2Q6XPS3 522 aa19.35■□□□□ 0.69
SNX13-205ENST00000471744 RIC3Q7Z5B4 369 aa19.35■□□□□ 0.69
SNX13-205ENST00000471744 NBPF5PQ86XG9 351 aaPredicted RBP19.35■□□□□ 0.69
SNX13-205ENST00000471744 ZNF34Q8IZ26 560 aa19.35■□□□□ 0.69
SNX13-205ENST00000471744 CNBD1Q8NA66 436 aa19.35■□□□□ 0.69
SNX13-205ENST00000471744 NYXQ9GZU5 481 aa19.35■□□□□ 0.69
SNX13-205ENST00000471744 ST5P78524 1137 aa19.34■□□□□ 0.69
SNX13-205ENST00000471744 TCIRG1Q13488 830 aa19.34■□□□□ 0.69
SNX13-205ENST00000471744 TCERG1O14776 1098 aaKnown RBP19.33■□□□□ 0.68
SNX13-205ENST00000471744 FLIIQ13045 1269 aa19.33■□□□□ 0.68
SNX13-205ENST00000471744 PPP1R42Q7Z4L9 355 aa19.33■□□□□ 0.68
SNX13-205ENST00000471744 PDZRN3Q9UPQ7 1066 aa19.33■□□□□ 0.68
SNX13-205ENST00000471744 RNF123Q5XPI4 1314 aa19.32■□□□□ 0.68
SNX13-205ENST00000471744 GPTP24298 496 aa19.32■□□□□ 0.68
SNX13-205ENST00000471744 ALDH1L2Q3SY69 923 aa19.32■□□□□ 0.68
SNX13-205ENST00000471744 PRR5LQ6MZQ0 368 aa19.32■□□□□ 0.68
SNX13-205ENST00000471744 KSR2Q6VAB6 950 aa19.32■□□□□ 0.68
SNX13-205ENST00000471744 DCAF8L1A6NGE4 600 aa19.31■□□□□ 0.68
SNX13-205ENST00000471744 CNKSR2Q8WXI2 1034 aa19.31■□□□□ 0.68
SNX13-205ENST00000471744 ANKRD31Q8N7Z5 1873 aa19.31■□□□□ 0.68
SNX13-205ENST00000471744 UBN2Q6ZU65 1347 aa19.3■□□□□ 0.68
SNX13-205ENST00000471744 N4BP2Q86UW6 1770 aaPredicted RBP19.3■□□□□ 0.68
SNX13-205ENST00000471744 GTF2E1P29083 439 aaPredicted RBP19.3■□□□□ 0.68
SNX13-205ENST00000471744 TRIM28Q13263 835 aaKnown RBP19.3■□□□□ 0.68
SNX13-205ENST00000471744 FKBP5Q13451 457 aaPredicted RBP19.3■□□□□ 0.68
SNX13-205ENST00000471744 NLGN2Q8NFZ4 835 aa19.3■□□□□ 0.68
SNX13-205ENST00000471744 BRIP1Q9BX63 1249 aa19.3■□□□□ 0.68
SNX13-205ENST00000471744 KIAA1551Q9HCM1 1747 aa19.3■□□□□ 0.68
SNX13-205ENST00000471744 PXDNLA1KZ92 1463 aa19.29■□□□□ 0.68
SNX13-205ENST00000471744 PI4KAP2A4QPH2 592 aa19.29■□□□□ 0.68
SNX13-205ENST00000471744 PDE6BP35913 854 aa19.29■□□□□ 0.68
SNX13-205ENST00000471744 NEXNQ0ZGT2 675 aa19.29■□□□□ 0.68
SNX13-205ENST00000471744 G2E3Q7L622 706 aa19.29■□□□□ 0.68
SNX13-205ENST00000471744 PI4KAP1Q8N8J0 262 aa19.29■□□□□ 0.68
SNX13-205ENST00000471744 ISCA1Q9BUE6 129 aa19.29■□□□□ 0.68
SNX13-205ENST00000471744 METTL22Q9BUU2 404 aaPredicted RBP19.29■□□□□ 0.68
SNX13-205ENST00000471744 UTP14AQ9BVJ6 771 aaKnown RBP19.29■□□□□ 0.68
SNX13-205ENST00000471744 BRCA1P38398 1863 aaKnown RBP19.28■□□□□ 0.68
SNX13-205ENST00000471744 SUSD4Q5VX71 490 aa19.28■□□□□ 0.68
SNX13-205ENST00000471744 NLRP10Q86W26 655 aa19.28■□□□□ 0.68
SNX13-205ENST00000471744 MAP3K2Q9Y2U5 619 aa19.28■□□□□ 0.68
SNX13-205ENST00000471744 DLEC1Q9Y238 1755 aa19.28■□□□□ 0.68
SNX13-205ENST00000471744 RIC1Q4ADV7 1423 aa19.27■□□□□ 0.68
SNX13-205ENST00000471744 FAM177BA6PVY3 158 aa19.27■□□□□ 0.68
SNX13-205ENST00000471744 NTSR2O95665 410 aa19.27■□□□□ 0.68
SNX13-205ENST00000471744 SSH1Q8WYL5 1049 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms