RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 MTFR1LQ9H019 292 aa22.1■■□□□ 1.13
HSPG2-208ENST00000471322 PTPRCP08575 1304 aa22.1■■□□□ 1.13
HSPG2-208ENST00000471322 TRAPPC3LQ5T215 181 aa22.09■■□□□ 1.13
HSPG2-208ENST00000471322 ARHGEF1Q92888 912 aaKnown RBP22.09■■□□□ 1.13
HSPG2-208ENST00000471322 ZNF330Q9Y3S2 320 aaPredicted RBP22.09■■□□□ 1.13
HSPG2-208ENST00000471322 KDM3BQ7LBC6 1761 aa22.09■■□□□ 1.13
HSPG2-208ENST00000471322 QSER1Q2KHR3 1735 aa22.09■■□□□ 1.13
HSPG2-208ENST00000471322 FLAD1Q8NFF5 587 aa22.09■■□□□ 1.13
HSPG2-208ENST00000471322 RWDD1Q9H446 243 aaPredicted RBP22.09■■□□□ 1.13
HSPG2-208ENST00000471322 ABCC4O15439 1325 aa22.08■■□□□ 1.13
HSPG2-208ENST00000471322 CCDC30Q5VVM6 783 aa22.08■■□□□ 1.13
HSPG2-208ENST00000471322 CICQ96RK0 1608 aaPredicted RBP22.08■■□□□ 1.12
HSPG2-208ENST00000471322 STK31Q9BXU1 1019 aa22.07■■□□□ 1.12
HSPG2-208ENST00000471322 TEX13AQ9BXU3 409 aaPredicted RBP22.07■■□□□ 1.12
HSPG2-208ENST00000471322 GIGYF1O75420 1035 aaPredicted RBP22.06■■□□□ 1.12
HSPG2-208ENST00000471322 HOXB7P09629 217 aa22.06■■□□□ 1.12
HSPG2-208ENST00000471322 RFC4P35249 363 aa22.06■■□□□ 1.12
HSPG2-208ENST00000471322 PTGER2P43116 358 aa22.06■■□□□ 1.12
HSPG2-208ENST00000471322 ZBTB40Q9NUA8 1239 aa22.06■■□□□ 1.12
HSPG2-208ENST00000471322 SLC4A2P04920 1241 aa22.06■■□□□ 1.12
HSPG2-208ENST00000471322 SLC16A10Q8TF71 515 aa22.06■■□□□ 1.12
HSPG2-208ENST00000471322 SRP68Q9UHB9 627 aaKnown RBP22.06■■□□□ 1.12
HSPG2-208ENST00000471322 PCDHB15Q9Y5E8 787 aa22.06■■□□□ 1.12
HSPG2-208ENST00000471322 IGHDP01880 384 aa22.05■■□□□ 1.12
HSPG2-208ENST00000471322 PPP1R1BQ9UD71 204 aaPredicted RBP22.05■■□□□ 1.12
HSPG2-208ENST00000471322 ARXQ96QS3 562 aa22.04■■□□□ 1.12
HSPG2-208ENST00000471322 NECTIN2Q92692 538 aa22.03■■□□□ 1.12
HSPG2-208ENST00000471322 ADRA2BP18089 450 aa22.02■■□□□ 1.12
HSPG2-208ENST00000471322 EIF2S2P20042 333 aaKnown RBP22.02■■□□□ 1.12
HSPG2-208ENST00000471322 SGIP1Q9BQI5 828 aa22.02■■□□□ 1.12
HSPG2-208ENST00000471322 ZBTB7BO15156 539 aaPredicted RBP22.02■■□□□ 1.11
HSPG2-208ENST00000471322 HDAC1Q13547 482 aaPredicted RBP22.02■■□□□ 1.11
HSPG2-208ENST00000471322 INTS3Q68E01 1043 aaKnown RBP22.02■■□□□ 1.11
HSPG2-208ENST00000471322 COL15A1P39059 1388 aa22.02■■□□□ 1.11
HSPG2-208ENST00000471322 LRP5O75197 1615 aa22.01■■□□□ 1.11
HSPG2-208ENST00000471322 NBPF26B4DH59 902 aa22■■□□□ 1.11
HSPG2-208ENST00000471322 EIF5P55010 431 aaKnown RBP22■■□□□ 1.11
HSPG2-208ENST00000471322 NBPF10Q6P3W6 841 aaKnown RBP22■■□□□ 1.11
HSPG2-208ENST00000471322 NBPF15Q8N660 670 aa22■■□□□ 1.11
HSPG2-208ENST00000471322 TBC1D2BQ9UPU7 963 aa22■■□□□ 1.11
HSPG2-208ENST00000471322 GYS1P13807 737 aa21.99■■□□□ 1.11
HSPG2-208ENST00000471322 POLD1P28340 1107 aa21.99■■□□□ 1.11
HSPG2-208ENST00000471322 USPL1Q5W0Q7 1092 aa21.99■■□□□ 1.11
HSPG2-208ENST00000471322 RBM19Q9Y4C8 960 aaKnown RBP21.99■■□□□ 1.11
HSPG2-208ENST00000471322 C4AP0C0L4 1744 aa21.99■■□□□ 1.11
HSPG2-208ENST00000471322 USP42Q9H9J4 1324 aaKnown RBP21.99■■□□□ 1.11
HSPG2-208ENST00000471322 ZPR1O75312 459 aa21.98■■□□□ 1.11
HSPG2-208ENST00000471322 MYL6BP14649 208 aa21.98■■□□□ 1.11
HSPG2-208ENST00000471322 KLHL34Q8N239 644 aa21.98■■□□□ 1.11
HSPG2-208ENST00000471322 IL6STP40189 918 aaPredicted RBP21.98■■□□□ 1.11
HSPG2-208ENST00000471322 HDGFL1Q5TGJ6 251 aa21.98■■□□□ 1.11
HSPG2-208ENST00000471322 NPM2Q86SE8 214 aaKnown RBP21.98■■□□□ 1.11
HSPG2-208ENST00000471322 ANXA1P04083 346 aa21.96■■□□□ 1.11
HSPG2-208ENST00000471322 MMP10P09238 476 aa21.95■■□□□ 1.1
HSPG2-208ENST00000471322 LAMB4A4D0S4 1761 aa21.95■■□□□ 1.1
HSPG2-208ENST00000471322 CCT4P50991 539 aaKnown RBP21.95■■□□□ 1.1
HSPG2-208ENST00000471322 NARFQ9UHQ1 456 aa21.95■■□□□ 1.1
HSPG2-208ENST00000471322 FLIIQ13045 1269 aa21.94■■□□□ 1.1
HSPG2-208ENST00000471322 PROSER3Q2NL68 480 aa21.94■■□□□ 1.1
HSPG2-208ENST00000471322 DZIP3Q86Y13 1208 aaKnown RBP21.94■■□□□ 1.1
HSPG2-208ENST00000471322 NLGN1Q8N2Q7 840 aa21.93■■□□□ 1.1
HSPG2-208ENST00000471322 FHDC1Q9C0D6 1143 aaPredicted RBP21.93■■□□□ 1.1
HSPG2-208ENST00000471322 BCL2L12Q9HB09 334 aa21.93■■□□□ 1.1
HSPG2-208ENST00000471322 A0A087WZG4 1122 aa21.92■■□□□ 1.1
HSPG2-208ENST00000471322 BICDL1Q6ZP65 573 aa21.92■■□□□ 1.1
HSPG2-208ENST00000471322 G2E3Q7L622 706 aa21.92■■□□□ 1.1
HSPG2-208ENST00000471322 FKBP5Q13451 457 aaPredicted RBP21.91■■□□□ 1.1
HSPG2-208ENST00000471322 PDIA6Q15084 440 aa21.91■■□□□ 1.1
HSPG2-208ENST00000471322 CAMTA2O94983 1202 aa21.9■■□□□ 1.1
HSPG2-208ENST00000471322 CHPF2Q9P2E5 772 aa21.9■■□□□ 1.1
HSPG2-208ENST00000471322 COL24A1Q17RW2 1714 aa21.89■■□□□ 1.1
HSPG2-208ENST00000471322 TTLL7Q6ZT98 887 aa21.89■■□□□ 1.09
HSPG2-208ENST00000471322 SMC5Q8IY18 1101 aa21.89■■□□□ 1.09
HSPG2-208ENST00000471322 DBF4Q9UBU7 674 aaPredicted RBP21.89■■□□□ 1.09
HSPG2-208ENST00000471322 DDR1Q08345 913 aa21.88■■□□□ 1.09
HSPG2-208ENST00000471322 AIMP1Q12904 312 aaKnown RBP21.88■■□□□ 1.09
HSPG2-208ENST00000471322 NFIXQ14938 502 aa21.88■■□□□ 1.09
HSPG2-208ENST00000471322 TBC1D9BQ66K14 1250 aa21.88■■□□□ 1.09
HSPG2-208ENST00000471322 SYT17Q9BSW7 474 aa21.88■■□□□ 1.09
HSPG2-208ENST00000471322 PDE4AP27815 886 aa21.87■■□□□ 1.09
HSPG2-208ENST00000471322 RGS3P49796 1198 aa21.87■■□□□ 1.09
HSPG2-208ENST00000471322 PDZRN3Q9UPQ7 1066 aa21.87■■□□□ 1.09
HSPG2-208ENST00000471322 PARP3Q9Y6F1 533 aa21.87■■□□□ 1.09
HSPG2-208ENST00000471322 CACNA1FO60840 1977 aa21.87■■□□□ 1.09
HSPG2-208ENST00000471322 HLFQ16534 295 aa21.86■■□□□ 1.09
HSPG2-208ENST00000471322 SLC4A10Q6U841 1118 aa21.86■■□□□ 1.09
HSPG2-208ENST00000471322 LRP10Q7Z4F1 713 aa21.86■■□□□ 1.09
HSPG2-208ENST00000471322 GCC1Q96CN9 775 aa21.86■■□□□ 1.09
HSPG2-208ENST00000471322 ZBTB3Q9H5J0 574 aa21.86■■□□□ 1.09
HSPG2-208ENST00000471322 TM4SF1P30408 202 aa21.85■■□□□ 1.09
HSPG2-208ENST00000471322 SKAP1Q86WV1 359 aa21.85■■□□□ 1.09
HSPG2-208ENST00000471322 RPAP2Q8IXW5 612 aaPredicted RBP21.85■■□□□ 1.09
HSPG2-208ENST00000471322 NLGN2Q8NFZ4 835 aa21.85■■□□□ 1.09
HSPG2-208ENST00000471322 BACH2Q9BYV9 841 aa21.85■■□□□ 1.09
HSPG2-208ENST00000471322 ERBB4Q15303 1308 aa21.85■■□□□ 1.09
HSPG2-208ENST00000471322 F6X3S4 739 aa21.84■■□□□ 1.09
HSPG2-208ENST00000471322 POLRMTO00411 1230 aaKnown RBP21.84■■□□□ 1.09
HSPG2-208ENST00000471322 DDX21Q9NR30 783 aaKnown RBP eCLIP21.84■■□□□ 1.09
HSPG2-208ENST00000471322 KIF6Q6ZMV9 814 aa21.84■■□□□ 1.09
HSPG2-208ENST00000471322 COPS6Q7L5N1 327 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms