RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 SLC24A3Q9HC58 644 aa7.4□□□□□ -1.22
HDAC8-216ENST00000470998 GPCPD1Q9NPB8 672 aa7.4□□□□□ -1.22
HDAC8-216ENST00000470998 USP35Q9P2H5 1018 aa7.4□□□□□ -1.22
HDAC8-216ENST00000470998 RCAN3Q9UKA8 241 aa7.4□□□□□ -1.22
HDAC8-216ENST00000470998 ZNF521Q96K83 1311 aa7.4□□□□□ -1.22
HDAC8-216ENST00000470998 USP31Q70CQ4 1352 aa7.4□□□□□ -1.22
HDAC8-216ENST00000470998 COL5A2P05997 1499 aaPredicted RBP7.4□□□□□ -1.22
HDAC8-216ENST00000470998 LMO7Q8WWI1 1683 aa7.4□□□□□ -1.23
HDAC8-216ENST00000470998 BRWD3Q6RI45 1802 aa7.39□□□□□ -1.23
HDAC8-216ENST00000470998 WDR17Q8IZU2 1322 aa7.39□□□□□ -1.23
HDAC8-216ENST00000470998 RRP1P56182 461 aaKnown RBP7.39□□□□□ -1.23
HDAC8-216ENST00000470998 TOM1L2Q6ZVM7 507 aa7.39□□□□□ -1.23
HDAC8-216ENST00000470998 MORC1Q86VD1 984 aa7.39□□□□□ -1.23
HDAC8-216ENST00000470998 CARD14Q9BXL6 1004 aa7.39□□□□□ -1.23
HDAC8-216ENST00000470998 PLA2G2EQ9NZK7 142 aa7.39□□□□□ -1.23
HDAC8-216ENST00000470998 TRIM37O94972 964 aa7.38□□□□□ -1.23
HDAC8-216ENST00000470998 APBA3O96018 575 aa7.38□□□□□ -1.23
HDAC8-216ENST00000470998 CAMKK2Q96RR4 588 aa7.38□□□□□ -1.23
HDAC8-216ENST00000470998 CARD10Q9BWT7 1032 aa7.38□□□□□ -1.23
HDAC8-216ENST00000470998 PNNQ9H307 717 aaKnown RBP7.38□□□□□ -1.23
HDAC8-216ENST00000470998 ADAMTS8Q9UP79 889 aa7.38□□□□□ -1.23
HDAC8-216ENST00000470998 PCDHB3Q9Y5E6 796 aa7.38□□□□□ -1.23
HDAC8-216ENST00000470998 ABCC6O95255 1503 aa7.37□□□□□ -1.23
HDAC8-216ENST00000470998 OVOS2A0A0G2JMS6 1433 aa7.37□□□□□ -1.23
HDAC8-216ENST00000470998 OVOS2A0A0J9YW53 1432 aa7.37□□□□□ -1.23
HDAC8-216ENST00000470998 BCL9O00512 1426 aa7.37□□□□□ -1.23
HDAC8-216ENST00000470998 OVOS2Q6IE36 1432 aa7.37□□□□□ -1.23
HDAC8-216ENST00000470998 A0A1W2PP64 1363 aa7.37□□□□□ -1.23
HDAC8-216ENST00000470998 E9PSI1 815 aa7.37□□□□□ -1.23
HDAC8-216ENST00000470998 APLP1P51693 650 aa7.37□□□□□ -1.23
HDAC8-216ENST00000470998 EZH2Q15910 746 aaKnown RBP7.37□□□□□ -1.23
HDAC8-216ENST00000470998 DDB1Q16531 1140 aa7.37□□□□□ -1.23
HDAC8-216ENST00000470998 CCDC27Q2M243 656 aa7.37□□□□□ -1.23
HDAC8-216ENST00000470998 TPRNQ4KMQ1 711 aa7.37□□□□□ -1.23
HDAC8-216ENST00000470998 FAM182BQ5T319 152 aa7.37□□□□□ -1.23
HDAC8-216ENST00000470998 NBPF14Q5TI25 921 aa7.37□□□□□ -1.23
HDAC8-216ENST00000470998 RGPD1P0DJD0 1748 aa7.37□□□□□ -1.23
HDAC8-216ENST00000470998 EDC4Q6P2E9 1401 aaKnown RBP7.36□□□□□ -1.23
HDAC8-216ENST00000470998 ZBTB7CA1YPR0 619 aa7.36□□□□□ -1.23
HDAC8-216ENST00000470998 TRIM66O15016 1216 aa7.36□□□□□ -1.23
HDAC8-216ENST00000470998 PLSCR1O15162 318 aa7.36□□□□□ -1.23
HDAC8-216ENST00000470998 CSB-PGBD3P0DP91 1061 aa7.36□□□□□ -1.23
HDAC8-216ENST00000470998 AAMPQ13685 434 aa7.36□□□□□ -1.23
HDAC8-216ENST00000470998 CNGB1Q14028 1251 aaPredicted RBP7.36□□□□□ -1.23
HDAC8-216ENST00000470998 AMHR2Q16671 573 aa7.36□□□□□ -1.23
HDAC8-216ENST00000470998 SLC12A5Q9H2X9 1139 aa7.36□□□□□ -1.23
HDAC8-216ENST00000470998 EXOC5O00471 708 aa7.35□□□□□ -1.23
HDAC8-216ENST00000470998 SLC10A3P09131 477 aa7.35□□□□□ -1.23
HDAC8-216ENST00000470998 CT47B1P0C2W7 299 aaPredicted RBP7.35□□□□□ -1.23
HDAC8-216ENST00000470998 KCNC4Q03721 635 aa7.35□□□□□ -1.23
HDAC8-216ENST00000470998 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.35□□□□□ -1.23
HDAC8-216ENST00000470998 CCDC136Q96JN2 1154 aa7.35□□□□□ -1.23
HDAC8-216ENST00000470998 EP400Q96L91 3159 aa7.35□□□□□ -1.23
HDAC8-216ENST00000470998 CD163L1Q9NR16 1453 aa7.35□□□□□ -1.23
HDAC8-216ENST00000470998 PIK3C2AO00443 1686 aa7.35□□□□□ -1.23
HDAC8-216ENST00000470998 COPS2P61201 443 aa7.34□□□□□ -1.23
HDAC8-216ENST00000470998 GRIPAP1Q4V328 841 aa7.34□□□□□ -1.23
HDAC8-216ENST00000470998 DUSP27Q5VZP5 1158 aa7.34□□□□□ -1.23
HDAC8-216ENST00000470998 GIGYF2Q6Y7W6 1299 aaKnown RBP7.34□□□□□ -1.23
HDAC8-216ENST00000470998 NME9Q86XW9 330 aa7.34□□□□□ -1.23
HDAC8-216ENST00000470998 WDR63Q8IWG1 891 aa7.34□□□□□ -1.23
HDAC8-216ENST00000470998 TRMT2AQ8IZ69 625 aaKnown RBP7.34□□□□□ -1.23
HDAC8-216ENST00000470998 RUNDC1Q96C34 613 aa7.34□□□□□ -1.23
HDAC8-216ENST00000470998 MTRQ99707 1265 aa7.34□□□□□ -1.23
HDAC8-216ENST00000470998 IL21Q9HBE4 155 aa7.34□□□□□ -1.23
HDAC8-216ENST00000470998 PARP4Q9UKK3 1724 aaKnown RBP7.34□□□□□ -1.23
HDAC8-216ENST00000470998 LRP5O75197 1615 aa7.34□□□□□ -1.24
HDAC8-216ENST00000470998 AKAP12Q02952 1782 aa7.33□□□□□ -1.24
HDAC8-216ENST00000470998 NFAT5O94916 1531 aa7.33□□□□□ -1.24
HDAC8-216ENST00000470998 ACTN4O43707 911 aaKnown RBP7.33□□□□□ -1.24
HDAC8-216ENST00000470998 PDE4DQ08499 809 aa7.33□□□□□ -1.24
HDAC8-216ENST00000470998 SLFN5Q08AF3 891 aa7.33□□□□□ -1.24
HDAC8-216ENST00000470998 R3HDM1Q15032 1099 aaKnown RBP7.33□□□□□ -1.24
HDAC8-216ENST00000470998 COG3Q96JB2 828 aa7.33□□□□□ -1.24
HDAC8-216ENST00000470998 FAM217BQ9NTX9 383 aaPredicted RBP7.33□□□□□ -1.24
HDAC8-216ENST00000470998 COL18A1P39060 1754 aa7.33□□□□□ -1.24
HDAC8-216ENST00000470998 TNS1Q9HBL0 1735 aaKnown RBP7.32□□□□□ -1.24
HDAC8-216ENST00000470998 USP54Q70EL1 1684 aa7.32□□□□□ -1.24
HDAC8-216ENST00000470998 NR1I2O75469 434 aa7.32□□□□□ -1.24
HDAC8-216ENST00000470998 ITGBL1O95965 494 aaPredicted RBP7.32□□□□□ -1.24
HDAC8-216ENST00000470998 IL2RBP14784 551 aa7.32□□□□□ -1.24
HDAC8-216ENST00000470998 CD46P15529 392 aa7.32□□□□□ -1.24
HDAC8-216ENST00000470998 SSTR3P32745 418 aaPredicted RBP7.32□□□□□ -1.24
HDAC8-216ENST00000470998 NUTM1Q86Y26 1132 aa7.32□□□□□ -1.24
HDAC8-216ENST00000470998 MARCH10Q8NA82 808 aaPredicted RBP7.32□□□□□ -1.24
HDAC8-216ENST00000470998 ANKRD24Q8TF21 1146 aa7.32□□□□□ -1.24
HDAC8-216ENST00000470998 IP6K1Q92551 441 aa7.32□□□□□ -1.24
HDAC8-216ENST00000470998 TNS2Q63HR2 1409 aa7.32□□□□□ -1.24
HDAC8-216ENST00000470998 MON2Q7Z3U7 1717 aa7.32□□□□□ -1.24
HDAC8-216ENST00000470998 ANKRD26Q9UPS8 1709 aa7.32□□□□□ -1.24
HDAC8-216ENST00000470998 IL16Q14005 1332 aa7.31□□□□□ -1.24
HDAC8-216ENST00000470998 FANCIQ9NVI1 1328 aa7.31□□□□□ -1.24
HDAC8-216ENST00000470998 COL3A1P02461 1466 aaPredicted RBP7.31□□□□□ -1.24
HDAC8-216ENST00000470998 GCGRP47871 477 aa7.31□□□□□ -1.24
HDAC8-216ENST00000470998 MTHFSP49914 203 aa7.31□□□□□ -1.24
HDAC8-216ENST00000470998 BLOC1S3Q6QNY0 202 aa7.31□□□□□ -1.24
HDAC8-216ENST00000470998 PARP9Q8IXQ6 854 aa7.31□□□□□ -1.24
HDAC8-216ENST00000470998 MYH16Q9H6N6 1097 aa7.31□□□□□ -1.24
HDAC8-216ENST00000470998 NLRP2Q9NX02 1062 aa7.31□□□□□ -1.24
HDAC8-216ENST00000470998 APAF1O14727 1248 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms