RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 ZKSCAN1P17029 563 aaPredicted RBP19.78■□□□□ 0.76
HOXB3-205ENST00000470495 AXDND1Q5T1B0 1012 aaPredicted RBP19.77■□□□□ 0.76
HOXB3-205ENST00000470495 KSR2Q6VAB6 950 aa19.77■□□□□ 0.76
HOXB3-205ENST00000470495 TNPO1Q92973 898 aaKnown RBP19.77■□□□□ 0.75
HOXB3-205ENST00000470495 SSFA2P28290 1259 aa19.76■□□□□ 0.75
HOXB3-205ENST00000470495 GOLGA6L1Q8N7Z2 621 aa19.76■□□□□ 0.75
HOXB3-205ENST00000470495 KIF20BQ96Q89 1820 aa19.76■□□□□ 0.75
HOXB3-205ENST00000470495 FMNL2Q96PY5 1086 aa19.76■□□□□ 0.75
HOXB3-205ENST00000470495 ADGRB2O60241 1585 aa19.76■□□□□ 0.75
HOXB3-205ENST00000470495 CCDC85AQ96PX6 553 aaPredicted RBP19.76■□□□□ 0.75
HOXB3-205ENST00000470495 TOMM22Q9NS69 142 aa19.76■□□□□ 0.75
HOXB3-205ENST00000470495 PRAMEF22A3QJZ6 481 aa19.75■□□□□ 0.75
HOXB3-205ENST00000470495 LETM1O95202 739 aaPredicted RBP19.75■□□□□ 0.75
HOXB3-205ENST00000470495 CHMP4CQ96CF2 233 aa19.75■□□□□ 0.75
HOXB3-205ENST00000470495 BABAM1Q9NWV8 329 aa19.75■□□□□ 0.75
HOXB3-205ENST00000470495 SKOR2Q2VWA4 1001 aaPredicted RBP19.75■□□□□ 0.75
HOXB3-205ENST00000470495 BOLA2Q9H3K6 86 aa19.75■□□□□ 0.75
HOXB3-205ENST00000470495 AXIN2Q9Y2T1 843 aa19.75■□□□□ 0.75
HOXB3-205ENST00000470495 KIF24Q5T7B8 1368 aa19.75■□□□□ 0.75
HOXB3-205ENST00000470495 TMEM94Q12767 1356 aa19.74■□□□□ 0.75
HOXB3-205ENST00000470495 KIAA2012Q0VF49 1180 aa19.74■□□□□ 0.75
HOXB3-205ENST00000470495 LARP6Q9BRS8 491 aaKnown RBP19.74■□□□□ 0.75
HOXB3-205ENST00000470495 GTF2A1P52655 376 aaPredicted RBP19.74■□□□□ 0.75
HOXB3-205ENST00000470495 UBE3BQ7Z3V4 1068 aa19.74■□□□□ 0.75
HOXB3-205ENST00000470495 DIP2AQ14689 1571 aa19.74■□□□□ 0.75
HOXB3-205ENST00000470495 GLRX3O76003 335 aaKnown RBP19.73■□□□□ 0.75
HOXB3-205ENST00000470495 ZNF790Q6PG37 636 aa19.73■□□□□ 0.75
HOXB3-205ENST00000470495 USP26Q9BXU7 913 aa19.73■□□□□ 0.75
HOXB3-205ENST00000470495 CIZ1Q9ULV3 898 aaPredicted RBP19.73■□□□□ 0.75
HOXB3-205ENST00000470495 SOS1Q07889 1333 aaPredicted RBP19.73■□□□□ 0.75
HOXB3-205ENST00000470495 SNRPA1P09661 255 aaKnown RBP19.73■□□□□ 0.75
HOXB3-205ENST00000470495 A0A087WZG4 1122 aa19.72■□□□□ 0.75
HOXB3-205ENST00000470495 GRM8O00222 908 aa19.72■□□□□ 0.75
HOXB3-205ENST00000470495 PROSER3Q2NL68 480 aa19.72■□□□□ 0.75
HOXB3-205ENST00000470495 ANKRD13DQ6ZTN6 518 aa19.72■□□□□ 0.75
HOXB3-205ENST00000470495 ZBTB3Q9H5J0 574 aa19.72■□□□□ 0.75
HOXB3-205ENST00000470495 CRB1P82279 1406 aa19.72■□□□□ 0.75
HOXB3-205ENST00000470495 SPDYE4A6NLX3 237 aa19.72■□□□□ 0.75
HOXB3-205ENST00000470495 GOLIM4O00461 696 aa19.72■□□□□ 0.75
HOXB3-205ENST00000470495 SNX21Q969T3 373 aa19.72■□□□□ 0.75
HOXB3-205ENST00000470495 ESYT1Q9BSJ8 1104 aa19.72■□□□□ 0.75
HOXB3-205ENST00000470495 PRPF40AO75400 957 aaKnown RBP19.71■□□□□ 0.75
HOXB3-205ENST00000470495 MRE11P49959 708 aa19.71■□□□□ 0.75
HOXB3-205ENST00000470495 FAM177BA6PVY3 158 aa19.71■□□□□ 0.75
HOXB3-205ENST00000470495 GIGYF1O75420 1035 aaPredicted RBP19.71■□□□□ 0.75
HOXB3-205ENST00000470495 ZBTB22O15209 634 aa19.71■□□□□ 0.75
HOXB3-205ENST00000470495 CNKSR2Q8WXI2 1034 aa19.7■□□□□ 0.74
HOXB3-205ENST00000470495 NPHP1O15259 732 aa19.7■□□□□ 0.74
HOXB3-205ENST00000470495 LINS1Q8NG48 757 aa19.7■□□□□ 0.74
HOXB3-205ENST00000470495 GOLGA6L4A6NEF3 574 aa19.7■□□□□ 0.74
HOXB3-205ENST00000470495 KIF20AO95235 890 aa19.7■□□□□ 0.74
HOXB3-205ENST00000470495 ZNF496Q96IT1 587 aaPredicted RBP19.69■□□□□ 0.74
HOXB3-205ENST00000470495 DDX21Q9NR30 783 aaKnown RBP eCLIP19.69■□□□□ 0.74
HOXB3-205ENST00000470495 SMC3Q9UQE7 1217 aa19.69■□□□□ 0.74
HOXB3-205ENST00000470495 ITSN1Q15811 1721 aa19.69■□□□□ 0.74
HOXB3-205ENST00000470495 ECHDC1Q9NTX5 307 aa19.69■□□□□ 0.74
HOXB3-205ENST00000470495 ADGRL3Q9HAR2 1447 aa19.69■□□□□ 0.74
HOXB3-205ENST00000470495 ALDH1L1O75891 902 aa19.69■□□□□ 0.74
HOXB3-205ENST00000470495 HOXB7P09629 217 aa19.69■□□□□ 0.74
HOXB3-205ENST00000470495 ARID4AP29374 1257 aaPredicted RBP19.69■□□□□ 0.74
HOXB3-205ENST00000470495 CAVIN1Q6NZI2 390 aaKnown RBP19.69■□□□□ 0.74
HOXB3-205ENST00000470495 ZCRB1Q8TBF4 217 aaKnown RBP19.69■□□□□ 0.74
HOXB3-205ENST00000470495 MCM2P49736 904 aa19.68■□□□□ 0.74
HOXB3-205ENST00000470495 KLHDC4Q8TBB5 520 aa19.68■□□□□ 0.74
HOXB3-205ENST00000470495 VPS37CA5D8V6 355 aaPredicted RBP19.68■□□□□ 0.74
HOXB3-205ENST00000470495 CHMLP26374 656 aa19.67■□□□□ 0.74
HOXB3-205ENST00000470495 RNF20Q5VTR2 975 aa19.67■□□□□ 0.74
HOXB3-205ENST00000470495 SLC52A2Q9HAB3 445 aa19.67■□□□□ 0.74
HOXB3-205ENST00000470495 KDRP35968 1356 aa19.67■□□□□ 0.74
HOXB3-205ENST00000470495 JAKMIP1Q96N16 626 aaKnown RBP19.67■□□□□ 0.74
HOXB3-205ENST00000470495 BICC1Q9H694 974 aaKnown RBP19.67■□□□□ 0.74
HOXB3-205ENST00000470495 CWC22Q9HCG8 908 aaKnown RBP19.67■□□□□ 0.74
HOXB3-205ENST00000470495 CD2BP2O95400 341 aaKnown RBP19.67■□□□□ 0.74
HOXB3-205ENST00000470495 PRPF40BQ6NWY9 871 aaKnown RBP19.67■□□□□ 0.74
HOXB3-205ENST00000470495 DCAF5Q96JK2 942 aa19.67■□□□□ 0.74
HOXB3-205ENST00000470495 BEND3Q5T5X7 828 aa19.66■□□□□ 0.74
HOXB3-205ENST00000470495 TMOD3Q9NYL9 352 aa19.66■□□□□ 0.74
HOXB3-205ENST00000470495 FBXO3Q9UK99 471 aa19.66■□□□□ 0.74
HOXB3-205ENST00000470495 ERBB3P21860 1342 aa19.66■□□□□ 0.74
HOXB3-205ENST00000470495 NUTM2BA6NNL0 878 aaPredicted RBP19.66■□□□□ 0.74
HOXB3-205ENST00000470495 NUTM2EB1AL46 878 aaPredicted RBP19.66■□□□□ 0.74
HOXB3-205ENST00000470495 CLSTN1O94985 981 aa19.66■□□□□ 0.74
HOXB3-205ENST00000470495 SSR1P43307 286 aaKnown RBP19.66■□□□□ 0.74
HOXB3-205ENST00000470495 NUTM2AQ8IVF1 878 aaPredicted RBP19.66■□□□□ 0.74
HOXB3-205ENST00000470495 CEP170BQ9Y4F5 1589 aaPredicted RBP19.66■□□□□ 0.74
HOXB3-205ENST00000470495 UBR1Q8IWV7 1749 aa19.66■□□□□ 0.74
HOXB3-205ENST00000470495 CASTP20810 708 aaKnown RBP19.65■□□□□ 0.74
HOXB3-205ENST00000470495 TDO2P48775 406 aa19.65■□□□□ 0.74
HOXB3-205ENST00000470495 TIGD1Q96MW7 591 aa19.65■□□□□ 0.74
HOXB3-205ENST00000470495 KIF6Q6ZMV9 814 aa19.65■□□□□ 0.74
HOXB3-205ENST00000470495 ZGPATQ8N5A5 531 aaKnown RBP19.65■□□□□ 0.74
HOXB3-205ENST00000470495 TMX1Q9H3N1 280 aa19.65■□□□□ 0.74
HOXB3-205ENST00000470495 USP16Q9Y5T5 823 aa19.65■□□□□ 0.74
HOXB3-205ENST00000470495 GTPBP4Q9BZE4 634 aaKnown RBP19.64■□□□□ 0.73
HOXB3-205ENST00000470495 TMED8Q6PL24 325 aaPredicted RBP19.64■□□□□ 0.73
HOXB3-205ENST00000470495 PHKG2P15735 406 aa19.64■□□□□ 0.73
HOXB3-205ENST00000470495 CSPP1Q1MSJ5 1256 aa19.63■□□□□ 0.73
HOXB3-205ENST00000470495 SUCLG2Q96I99 432 aa19.63■□□□□ 0.73
HOXB3-205ENST00000470495 SSH3Q8TE77 659 aa19.63■□□□□ 0.73
HOXB3-205ENST00000470495 ADAMTS2O95450 1211 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms