RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 TM4SF1P30408 202 aa16.14■□□□□ 0.17
SPTLC1-204ENST00000469778 GIGYF2Q6Y7W6 1299 aaKnown RBP16.14■□□□□ 0.17
SPTLC1-204ENST00000469778 CACNA1FO60840 1977 aa16.14■□□□□ 0.17
SPTLC1-204ENST00000469778 FKBP8Q14318 412 aa16.13■□□□□ 0.17
SPTLC1-204ENST00000469778 KSR2Q6VAB6 950 aa16.13■□□□□ 0.17
SPTLC1-204ENST00000469778 TTLL7Q6ZT98 887 aa16.13■□□□□ 0.17
SPTLC1-204ENST00000469778 SMIM5Q71RC9 77 aa16.13■□□□□ 0.17
SPTLC1-204ENST00000469778 SETDB2Q96T68 719 aa16.13■□□□□ 0.17
SPTLC1-204ENST00000469778 BCL2L12Q9HB09 334 aa16.13■□□□□ 0.17
SPTLC1-204ENST00000469778 SRP68Q9UHB9 627 aaKnown RBP16.13■□□□□ 0.17
SPTLC1-204ENST00000469778 ANXA1P04083 346 aa16.12■□□□□ 0.17
SPTLC1-204ENST00000469778 AIMP1Q12904 312 aaKnown RBP16.12■□□□□ 0.17
SPTLC1-204ENST00000469778 FLIIQ13045 1269 aa16.12■□□□□ 0.17
SPTLC1-204ENST00000469778 TRIM28Q13263 835 aaKnown RBP16.12■□□□□ 0.17
SPTLC1-204ENST00000469778 PARP10Q53GL7 1025 aa16.12■□□□□ 0.17
SPTLC1-204ENST00000469778 SSH1Q8WYL5 1049 aa16.12■□□□□ 0.17
SPTLC1-204ENST00000469778 SGIP1Q9BQI5 828 aa16.12■□□□□ 0.17
SPTLC1-204ENST00000469778 PARP3Q9Y6F1 533 aa16.12■□□□□ 0.17
SPTLC1-204ENST00000469778 PTPRCP08575 1304 aa16.12■□□□□ 0.17
SPTLC1-204ENST00000469778 TUBGCP6Q96RT7 1819 aa16.12■□□□□ 0.17
SPTLC1-204ENST00000469778 IPO8O15397 1037 aaKnown RBP16.11■□□□□ 0.17
SPTLC1-204ENST00000469778 MMP10P09238 476 aa16.11■□□□□ 0.17
SPTLC1-204ENST00000469778 PTGER2P43116 358 aa16.11■□□□□ 0.17
SPTLC1-204ENST00000469778 RARSP54136 660 aaKnown RBP16.11■□□□□ 0.17
SPTLC1-204ENST00000469778 TCIRG1Q13488 830 aa16.11■□□□□ 0.17
SPTLC1-204ENST00000469778 RIC3Q7Z5B4 369 aa16.11■□□□□ 0.17
SPTLC1-204ENST00000469778 MRPL50Q8N5N7 158 aaKnown RBP16.11■□□□□ 0.17
SPTLC1-204ENST00000469778 PHAXQ9H814 394 aaKnown RBP16.11■□□□□ 0.17
SPTLC1-204ENST00000469778 ATF5Q9Y2D1 282 aaPredicted RBP16.11■□□□□ 0.17
SPTLC1-204ENST00000469778 NFIXQ14938 502 aa16.1■□□□□ 0.17
SPTLC1-204ENST00000469778 TPTE2Q6XPS3 522 aa16.1■□□□□ 0.17
SPTLC1-204ENST00000469778 ZNF34Q8IZ26 560 aa16.1■□□□□ 0.17
SPTLC1-204ENST00000469778 ARHGAP45Q92619 1136 aa16.1■□□□□ 0.17
SPTLC1-204ENST00000469778 ZBTB3Q9H5J0 574 aa16.1■□□□□ 0.17
SPTLC1-204ENST00000469778 SMC4Q9NTJ3 1288 aa16.1■□□□□ 0.17
SPTLC1-204ENST00000469778 ATP10DQ9P241 1426 aa16.1■□□□□ 0.17
SPTLC1-204ENST00000469778 NEXNQ0ZGT2 675 aa16.09■□□□□ 0.17
SPTLC1-204ENST00000469778 FKBP5Q13451 457 aaPredicted RBP16.09■□□□□ 0.17
SPTLC1-204ENST00000469778 HLFQ16534 295 aa16.09■□□□□ 0.17
SPTLC1-204ENST00000469778 YTHDC1Q96MU7 727 aaKnown RBP16.09■□□□□ 0.17
SPTLC1-204ENST00000469778 NYXQ9GZU5 481 aa16.09■□□□□ 0.17
SPTLC1-204ENST00000469778 NIP7Q9Y221 180 aaKnown RBP eCLIP16.09■□□□□ 0.17
SPTLC1-204ENST00000469778 RNF123Q5XPI4 1314 aa16.09■□□□□ 0.17
SPTLC1-204ENST00000469778 C4AP0C0L4 1744 aa16.08■□□□□ 0.17
SPTLC1-204ENST00000469778 PI4KAP2A4QPH2 592 aa16.08■□□□□ 0.16
SPTLC1-204ENST00000469778 TCERG1O14776 1098 aaKnown RBP16.08■□□□□ 0.16
SPTLC1-204ENST00000469778 TBC1D9BQ66K14 1250 aa16.08■□□□□ 0.16
SPTLC1-204ENST00000469778 MSL1Q68DK7 614 aa16.08■□□□□ 0.16
SPTLC1-204ENST00000469778 PPP1R42Q7Z4L9 355 aa16.08■□□□□ 0.16
SPTLC1-204ENST00000469778 PI4KAP1Q8N8J0 262 aa16.08■□□□□ 0.16
SPTLC1-204ENST00000469778 METTL22Q9BUU2 404 aaPredicted RBP16.08■□□□□ 0.16
SPTLC1-204ENST00000469778 PDZRN3Q9UPQ7 1066 aa16.08■□□□□ 0.16
SPTLC1-204ENST00000469778 KIF16BQ96L93 1317 aa16.08■□□□□ 0.16
SPTLC1-204ENST00000469778 CARMIL3Q8ND23 1372 aa16.08■□□□□ 0.16
SPTLC1-204ENST00000469778 COL24A1Q17RW2 1714 aa16.08■□□□□ 0.16
SPTLC1-204ENST00000469778 POLRMTO00411 1230 aaKnown RBP16.07■□□□□ 0.16
SPTLC1-204ENST00000469778 SERPINB2P05120 415 aa16.07■□□□□ 0.16
SPTLC1-204ENST00000469778 HSP90B1P14625 803 aaKnown RBP16.07■□□□□ 0.16
SPTLC1-204ENST00000469778 G2E3Q7L622 706 aa16.07■□□□□ 0.16
SPTLC1-204ENST00000469778 CD2APQ9Y5K6 639 aa16.07■□□□□ 0.16
SPTLC1-204ENST00000469778 IBTKQ9P2D0 1353 aaPredicted RBP16.07■□□□□ 0.16
SPTLC1-204ENST00000469778 NBPF5PQ86XG9 351 aaPredicted RBP16.06■□□□□ 0.16
SPTLC1-204ENST00000469778 CCDC191Q8NCU4 936 aa16.06■□□□□ 0.16
SPTLC1-204ENST00000469778 DNAAF4Q8WXU2 420 aa16.06■□□□□ 0.16
SPTLC1-204ENST00000469778 ISCA1Q9BUE6 129 aa16.06■□□□□ 0.16
SPTLC1-204ENST00000469778 API5Q9BZZ5 524 aaKnown RBP16.06■□□□□ 0.16
SPTLC1-204ENST00000469778 PPP1R1BQ9UD71 204 aaPredicted RBP16.06■□□□□ 0.16
SPTLC1-204ENST00000469778 MAP3K2Q9Y2U5 619 aa16.06■□□□□ 0.16
SPTLC1-204ENST00000469778 SCN7AQ01118 1682 aa16.05■□□□□ 0.16
SPTLC1-204ENST00000469778 DDR1Q08345 913 aa16.05■□□□□ 0.16
SPTLC1-204ENST00000469778 LINS1Q8NG48 757 aa16.05■□□□□ 0.16
SPTLC1-204ENST00000469778 BICDL1Q6ZP65 573 aa16.04■□□□□ 0.16
SPTLC1-204ENST00000469778 NLRP10Q86W26 655 aa16.04■□□□□ 0.16
SPTLC1-204ENST00000469778 UTP14AQ9BVJ6 771 aaKnown RBP16.04■□□□□ 0.16
SPTLC1-204ENST00000469778 RCAN3Q9UKA8 241 aa16.04■□□□□ 0.16
SPTLC1-204ENST00000469778 BCORQ6W2J9 1755 aa16.03■□□□□ 0.16
SPTLC1-204ENST00000469778 ADCY9O60503 1353 aa16.03■□□□□ 0.16
SPTLC1-204ENST00000469778 NPHP1O15259 732 aa16.03■□□□□ 0.16
SPTLC1-204ENST00000469778 MS4A1P11836 297 aa16.03■□□□□ 0.16
SPTLC1-204ENST00000469778 GTF2E1P29083 439 aaPredicted RBP16.03■□□□□ 0.16
SPTLC1-204ENST00000469778 ST5P78524 1137 aa16.03■□□□□ 0.16
SPTLC1-204ENST00000469778 CNBD1Q8NA66 436 aa16.03■□□□□ 0.16
SPTLC1-204ENST00000469778 BRIP1Q9BX63 1249 aa16.03■□□□□ 0.16
SPTLC1-204ENST00000469778 NOB1Q9ULX3 412 aaKnown RBP16.03■□□□□ 0.16
SPTLC1-204ENST00000469778 LRP5O75197 1615 aa16.02■□□□□ 0.16
SPTLC1-204ENST00000469778 ALDH1L1O75891 902 aa16.02■□□□□ 0.16
SPTLC1-204ENST00000469778 TGFB2P61812 414 aa16.02■□□□□ 0.16
SPTLC1-204ENST00000469778 SLC10A5Q5PT55 438 aa16.02■□□□□ 0.16
SPTLC1-204ENST00000469778 BCL2L13Q9BXK5 485 aa16.02■□□□□ 0.16
SPTLC1-204ENST00000469778 CWC25Q9NXE8 425 aaPredicted RBP16.02■□□□□ 0.16
SPTLC1-204ENST00000469778 NUP98P52948 1817 aa16.01■□□□□ 0.15
SPTLC1-204ENST00000469778 GPTP24298 496 aa16.01■□□□□ 0.15
SPTLC1-204ENST00000469778 PDE6BP35913 854 aa16.01■□□□□ 0.15
SPTLC1-204ENST00000469778 CCT4P50991 539 aaKnown RBP16.01■□□□□ 0.15
SPTLC1-204ENST00000469778 SUSD4Q5VX71 490 aa16.01■□□□□ 0.15
SPTLC1-204ENST00000469778 ZKSCAN2Q63HK3 967 aa16.01■□□□□ 0.15
SPTLC1-204ENST00000469778 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.01■□□□□ 0.15
SPTLC1-204ENST00000469778 MYD88Q99836 296 aa16.01■□□□□ 0.15
SPTLC1-204ENST00000469778 UBN2Q6ZU65 1347 aa16■□□□□ 0.15
SPTLC1-204ENST00000469778 SH3TC1Q8TE82 1336 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms