RNA–Protein interactions for RNA: ENST00000469147.5

TRAPPC12-215, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 1,002 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-215ENST00000469147 TSR2Q969E8 191 aaKnown RBP12.43□□□□□ -0.42
TRAPPC12-215ENST00000469147 POLRMTO00411 1230 aaKnown RBP12.42□□□□□ -0.42
TRAPPC12-215ENST00000469147 RGL2O15211 777 aa12.42□□□□□ -0.42
TRAPPC12-215ENST00000469147 HNRNPUQ00839 825 aaKnown RBP eCLIP12.42□□□□□ -0.42
TRAPPC12-215ENST00000469147 NFIXQ14938 502 aa12.42□□□□□ -0.42
TRAPPC12-215ENST00000469147 KRT24Q2M2I5 525 aa12.42□□□□□ -0.42
TRAPPC12-215ENST00000469147 HDGFL1Q5TGJ6 251 aa12.42□□□□□ -0.42
TRAPPC12-215ENST00000469147 CCDC24Q8N4L8 307 aa12.42□□□□□ -0.42
TRAPPC12-215ENST00000469147 PIM2Q9P1W9 311 aa12.42□□□□□ -0.42
TRAPPC12-215ENST00000469147 TBC1D2BQ9UPU7 963 aa12.42□□□□□ -0.42
TRAPPC12-215ENST00000469147 PXDNLA1KZ92 1463 aa12.41□□□□□ -0.42
TRAPPC12-215ENST00000469147 DPEP1P16444 411 aa12.41□□□□□ -0.42
TRAPPC12-215ENST00000469147 EIF2S2P20042 333 aaKnown RBP12.41□□□□□ -0.42
TRAPPC12-215ENST00000469147 NARFQ9UHQ1 456 aa12.41□□□□□ -0.42
TRAPPC12-215ENST00000469147 SLFN5Q08AF3 891 aa12.4□□□□□ -0.42
TRAPPC12-215ENST00000469147 TWISTNBQ3B726 338 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC12-215ENST00000469147 DALRD3Q5D0E6 543 aaKnown RBP12.4□□□□□ -0.42
TRAPPC12-215ENST00000469147 TBC1D9BQ66K14 1250 aa12.4□□□□□ -0.42
TRAPPC12-215ENST00000469147 C8orf58Q8NAV2 365 aa12.4□□□□□ -0.42
TRAPPC12-215ENST00000469147 SPINK5Q9NQ38 1064 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC12-215ENST00000469147 DDX21Q9NR30 783 aaKnown RBP eCLIP12.4□□□□□ -0.42
TRAPPC12-215ENST00000469147 DBF4Q9UBU7 674 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC12-215ENST00000469147 SCN7AQ01118 1682 aa12.4□□□□□ -0.42
TRAPPC12-215ENST00000469147 CARMIL3Q8ND23 1372 aa12.4□□□□□ -0.42
TRAPPC12-215ENST00000469147 ZBED9Q6R2W3 1325 aa12.39□□□□□ -0.43
TRAPPC12-215ENST00000469147 C10orf71Q711Q0 1435 aa12.39□□□□□ -0.43
TRAPPC12-215ENST00000469147 BCORQ6W2J9 1755 aa12.39□□□□□ -0.43
TRAPPC12-215ENST00000469147 CAMTA2O94983 1202 aa12.39□□□□□ -0.43
TRAPPC12-215ENST00000469147 CHRNA5P30532 468 aa12.39□□□□□ -0.43
TRAPPC12-215ENST00000469147 CCDC30Q5VVM6 783 aa12.39□□□□□ -0.43
TRAPPC12-215ENST00000469147 BICDL1Q6ZP65 573 aa12.39□□□□□ -0.43
TRAPPC12-215ENST00000469147 DZIP3Q86Y13 1208 aaKnown RBP12.39□□□□□ -0.43
TRAPPC12-215ENST00000469147 ZNF330Q9Y3S2 320 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC12-215ENST00000469147 BRCA1P38398 1863 aaKnown RBP12.39□□□□□ -0.43
TRAPPC12-215ENST00000469147 ELL2O00472 640 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC12-215ENST00000469147 NPHP1O15259 732 aa12.38□□□□□ -0.43
TRAPPC12-215ENST00000469147 PDIA6Q15084 440 aa12.38□□□□□ -0.43
TRAPPC12-215ENST00000469147 LRP10Q7Z4F1 713 aa12.38□□□□□ -0.43
TRAPPC12-215ENST00000469147 TRMT2AQ8IZ69 625 aaKnown RBP12.38□□□□□ -0.43
TRAPPC12-215ENST00000469147 TSPYL6Q8N831 410 aa12.38□□□□□ -0.43
TRAPPC12-215ENST00000469147 HYPKQ9NX55 129 aa12.38□□□□□ -0.43
TRAPPC12-215ENST00000469147 NRXN2Q9P2S2 1712 aa12.37□□□□□ -0.43
TRAPPC12-215ENST00000469147 ERVV-1B6SEH8 477 aa12.37□□□□□ -0.43
TRAPPC12-215ENST00000469147 TOMM70O94826 608 aa12.37□□□□□ -0.43
TRAPPC12-215ENST00000469147 MYL6BP14649 208 aa12.37□□□□□ -0.43
TRAPPC12-215ENST00000469147 APLP1P51693 650 aa12.37□□□□□ -0.43
TRAPPC12-215ENST00000469147 EXOSC9Q06265 439 aaKnown RBP12.37□□□□□ -0.43
TRAPPC12-215ENST00000469147 HLFQ16534 295 aa12.37□□□□□ -0.43
TRAPPC12-215ENST00000469147 IFFO2Q5TF58 517 aa12.37□□□□□ -0.43
TRAPPC12-215ENST00000469147 C9orf131Q5VYM1 1079 aa12.37□□□□□ -0.43
TRAPPC12-215ENST00000469147 CLEC4GQ6UXB4 293 aa12.37□□□□□ -0.43
TRAPPC12-215ENST00000469147 CHPF2Q9P2E5 772 aa12.37□□□□□ -0.43
TRAPPC12-215ENST00000469147 ZNF652Q9Y2D9 606 aa12.37□□□□□ -0.43
TRAPPC12-215ENST00000469147 ANKRD31Q8N7Z5 1873 aa12.37□□□□□ -0.43
TRAPPC12-215ENST00000469147 KDM2BQ8NHM5 1336 aa12.37□□□□□ -0.43
TRAPPC12-215ENST00000469147 VAMP4O75379 141 aa12.36□□□□□ -0.43
TRAPPC12-215ENST00000469147 ANXA1P04083 346 aa12.36□□□□□ -0.43
TRAPPC12-215ENST00000469147 CT47B1P0C2W7 299 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC12-215ENST00000469147 PROSER3Q2NL68 480 aa12.36□□□□□ -0.43
TRAPPC12-215ENST00000469147 KIF6Q6ZMV9 814 aa12.36□□□□□ -0.43
TRAPPC12-215ENST00000469147 NECTIN2Q92692 538 aa12.36□□□□□ -0.43
TRAPPC12-215ENST00000469147 ZNF428Q96B54 188 aa12.36□□□□□ -0.43
TRAPPC12-215ENST00000469147 STK31Q9BXU1 1019 aa12.36□□□□□ -0.43
TRAPPC12-215ENST00000469147 RNF181Q9P0P0 153 aa12.36□□□□□ -0.43
TRAPPC12-215ENST00000469147 CACNA1FO60840 1977 aa12.36□□□□□ -0.43
TRAPPC12-215ENST00000469147 MAP3K15Q6ZN16 1313 aa12.36□□□□□ -0.43
TRAPPC12-215ENST00000469147 SERPINB2P05120 415 aa12.35□□□□□ -0.43
TRAPPC12-215ENST00000469147 TTLL7Q6ZT98 887 aa12.35□□□□□ -0.43
TRAPPC12-215ENST00000469147 CDCA7LQ96GN5 454 aa12.35□□□□□ -0.43
TRAPPC12-215ENST00000469147 KIF3CO14782 793 aa12.34□□□□□ -0.43
TRAPPC12-215ENST00000469147 PRELPP51888 382 aa12.34□□□□□ -0.43
TRAPPC12-215ENST00000469147 SLC51AQ86UW1 340 aa12.34□□□□□ -0.43
TRAPPC12-215ENST00000469147 GIGYF2Q6Y7W6 1299 aaKnown RBP12.33□□□□□ -0.44
TRAPPC12-215ENST00000469147 COPS6Q7L5N1 327 aa12.33□□□□□ -0.44
TRAPPC12-215ENST00000469147 XAGE3Q8WTP9 111 aa12.33□□□□□ -0.44
TRAPPC12-215ENST00000469147 RRAGCQ9HB90 399 aa12.33□□□□□ -0.44
TRAPPC12-215ENST00000469147 NMRK2Q9NPI5 230 aa12.33□□□□□ -0.44
TRAPPC12-215ENST00000469147 ADCY9O60503 1353 aa12.32□□□□□ -0.44
TRAPPC12-215ENST00000469147 H0YIN7 160 aa12.32□□□□□ -0.44
TRAPPC12-215ENST00000469147 HSP90AB3PQ58FF7 597 aa12.32□□□□□ -0.44
TRAPPC12-215ENST00000469147 PLBD2Q8NHP8 589 aa12.32□□□□□ -0.44
TRAPPC12-215ENST00000469147 COL11A2P13942 1736 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC12-215ENST00000469147 DDX58O95786 925 aaKnown RBP12.31□□□□□ -0.44
TRAPPC12-215ENST00000469147 SLC4A2P04920 1241 aa12.31□□□□□ -0.44
TRAPPC12-215ENST00000469147 AIMP1Q12904 312 aaKnown RBP12.31□□□□□ -0.44
TRAPPC12-215ENST00000469147 PRR5LQ6MZQ0 368 aa12.31□□□□□ -0.44
TRAPPC12-215ENST00000469147 ANKRD13DQ6ZTN6 518 aa12.31□□□□□ -0.44
TRAPPC12-215ENST00000469147 ZNF622Q969S3 477 aaKnown RBP eCLIP12.31□□□□□ -0.44
TRAPPC12-215ENST00000469147 SETDB2Q96T68 719 aa12.31□□□□□ -0.44
TRAPPC12-215ENST00000469147 ZBTB3Q9H5J0 574 aa12.31□□□□□ -0.44
TRAPPC12-215ENST00000469147 NUP98P52948 1817 aa12.31□□□□□ -0.44
TRAPPC12-215ENST00000469147 IBTKQ9P2D0 1353 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC12-215ENST00000469147 FAM177BA6PVY3 158 aa12.3□□□□□ -0.44
TRAPPC12-215ENST00000469147 ALDH1L2Q3SY69 923 aa12.3□□□□□ -0.44
TRAPPC12-215ENST00000469147 C2CD5Q86YS7 1000 aa12.3□□□□□ -0.44
TRAPPC12-215ENST00000469147 RBM46Q8TBY0 533 aaKnown RBP12.3□□□□□ -0.44
TRAPPC12-215ENST00000469147 ZNF219Q9P2Y4 722 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC12-215ENST00000469147 ANKRD36CQ5JPF3 1778 aa12.3□□□□□ -0.44
TRAPPC12-215ENST00000469147 ARFGEF2Q9Y6D5 1785 aa12.29□□□□□ -0.44
TRAPPC12-215ENST00000469147 FLIIQ13045 1269 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms