RNA–Protein interactions for RNA: ENST00000467931.1

COL1A2-204, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 713 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-204ENST00000467931 C21orf2O43822 256 aa25.25■■□□□ 1.63
COL1A2-204ENST00000467931 LAMB4A4D0S4 1761 aa25.24■■□□□ 1.63
COL1A2-204ENST00000467931 PRAMEF22A3QJZ6 481 aa25.24■■□□□ 1.63
COL1A2-204ENST00000467931 DCTN1Q14203 1278 aa25.24■■□□□ 1.63
COL1A2-204ENST00000467931 DNAJC5GQ8N7S2 189 aa25.24■■□□□ 1.63
COL1A2-204ENST00000467931 SMC1BQ8NDV3 1235 aa25.24■■□□□ 1.63
COL1A2-204ENST00000467931 SNRPA1P09661 255 aaKnown RBP25.23■■□□□ 1.63
COL1A2-204ENST00000467931 VEGFAP15692 232 aaPredicted RBP25.22■■□□□ 1.63
COL1A2-204ENST00000467931 ZNF652Q9Y2D9 606 aa25.21■■□□□ 1.63
COL1A2-204ENST00000467931 NEFMP07197 916 aa25.2■■□□□ 1.62
COL1A2-204ENST00000467931 NBPF5PQ86XG9 351 aaPredicted RBP25.2■■□□□ 1.62
COL1A2-204ENST00000467931 CNKSR1Q969H4 720 aa25.2■■□□□ 1.62
COL1A2-204ENST00000467931 ERFEQ4G0M1 354 aa25.19■■□□□ 1.62
COL1A2-204ENST00000467931 DPY19L2Q6NUT2 758 aa25.19■■□□□ 1.62
COL1A2-204ENST00000467931 STYK1Q6J9G0 422 aa25.18■■□□□ 1.62
COL1A2-204ENST00000467931 PRPF40BQ6NWY9 871 aaKnown RBP25.18■■□□□ 1.62
COL1A2-204ENST00000467931 KLRG1Q96E93 195 aa25.18■■□□□ 1.62
COL1A2-204ENST00000467931 HTATSF1O43719 755 aaKnown RBP25.17■■□□□ 1.62
COL1A2-204ENST00000467931 MASTLQ96GX5 879 aa25.17■■□□□ 1.62
COL1A2-204ENST00000467931 TAOK3Q9H2K8 898 aa25.17■■□□□ 1.62
COL1A2-204ENST00000467931 KDM3BQ7LBC6 1761 aa25.17■■□□□ 1.62
COL1A2-204ENST00000467931 SRGNP10124 158 aa25.16■■□□□ 1.62
COL1A2-204ENST00000467931 CLEC4GQ6UXB4 293 aa25.16■■□□□ 1.62
COL1A2-204ENST00000467931 FAM177BA6PVY3 158 aa25.15■■□□□ 1.62
COL1A2-204ENST00000467931 TAF7Q15545 349 aaPredicted RBP25.15■■□□□ 1.62
COL1A2-204ENST00000467931 MIS18AQ9NYP9 233 aa25.15■■□□□ 1.62
COL1A2-204ENST00000467931 NUP98P52948 1817 aa25.14■■□□□ 1.62
COL1A2-204ENST00000467931 SOGA3Q5TF21 947 aa25.14■■□□□ 1.62
COL1A2-204ENST00000467931 NIP7Q9Y221 180 aaKnown RBP eCLIP25.14■■□□□ 1.62
COL1A2-204ENST00000467931 LTBP3Q9NS15 1303 aa25.13■■□□□ 1.61
COL1A2-204ENST00000467931 NBPF26B4DH59 902 aa25.13■■□□□ 1.61
COL1A2-204ENST00000467931 NBPF10Q6P3W6 841 aaKnown RBP25.13■■□□□ 1.61
COL1A2-204ENST00000467931 NBPF15Q8N660 670 aa25.13■■□□□ 1.61
COL1A2-204ENST00000467931 TPTE2Q6XPS3 522 aa25.11■■□□□ 1.61
COL1A2-204ENST00000467931 NPR1P16066 1061 aa25.1■■□□□ 1.61
COL1A2-204ENST00000467931 GTF2E1P29083 439 aaPredicted RBP25.1■■□□□ 1.61
COL1A2-204ENST00000467931 NGEFQ8N5V2 710 aa25.1■■□□□ 1.61
COL1A2-204ENST00000467931 CCDC93Q567U6 631 aa25.09■■□□□ 1.61
COL1A2-204ENST00000467931 POTECB2RU33 542 aa25.08■■□□□ 1.61
COL1A2-204ENST00000467931 HLFQ16534 295 aa25.08■■□□□ 1.61
COL1A2-204ENST00000467931 JMYQ8N9B5 988 aa25.08■■□□□ 1.61
COL1A2-204ENST00000467931 PNISRQ8TF01 805 aaKnown RBP25.08■■□□□ 1.61
COL1A2-204ENST00000467931 MAPK8IP3Q9UPT6 1336 aa25.07■■□□□ 1.6
COL1A2-204ENST00000467931 DDNO94850 711 aaPredicted RBP25.06■■□□□ 1.6
COL1A2-204ENST00000467931 SCN4AP35499 1836 aa25.06■■□□□ 1.6
COL1A2-204ENST00000467931 PCNTO95613 3336 aa25.06■■□□□ 1.6
COL1A2-204ENST00000467931 RGL2O15211 777 aa25.05■■□□□ 1.6
COL1A2-204ENST00000467931 THUMPD2Q9BTF0 503 aaKnown RBP25.05■■□□□ 1.6
COL1A2-204ENST00000467931 RRP7AQ9Y3A4 280 aaKnown RBP25.05■■□□□ 1.6
COL1A2-204ENST00000467931 NFE2L2Q16236 605 aa25.04■■□□□ 1.6
COL1A2-204ENST00000467931 KIF6Q6ZMV9 814 aa25.04■■□□□ 1.6
COL1A2-204ENST00000467931 MYL6BP14649 208 aa25.03■■□□□ 1.6
COL1A2-204ENST00000467931 KLRG2A4D1S0 409 aaPredicted RBP25.02■■□□□ 1.6
COL1A2-204ENST00000467931 FKBP4Q02790 459 aaKnown RBP eCLIP25.02■■□□□ 1.6
COL1A2-204ENST00000467931 OLFM4Q6UX06 510 aa25.02■■□□□ 1.6
COL1A2-204ENST00000467931 C7orf43Q8WVR3 580 aa25.02■■□□□ 1.6
COL1A2-204ENST00000467931 PLEKHF1Q96S99 279 aa25.02■■□□□ 1.6
COL1A2-204ENST00000467931 NYXQ9GZU5 481 aa25.02■■□□□ 1.6
COL1A2-204ENST00000467931 PNNQ9H307 717 aaKnown RBP25.02■■□□□ 1.6
COL1A2-204ENST00000467931 ZNF277Q9NRM2 450 aaPredicted RBP25.02■■□□□ 1.6
COL1A2-204ENST00000467931 ALDH1B1P30837 517 aa25.01■■□□□ 1.59
COL1A2-204ENST00000467931 EIF4A1P60842 406 aaKnown RBP25.01■■□□□ 1.59
COL1A2-204ENST00000467931 CHADLQ6NUI6 762 aa25.01■■□□□ 1.59
COL1A2-204ENST00000467931 NUTM1Q86Y26 1132 aa25■■□□□ 1.59
COL1A2-204ENST00000467931 MAP3K15Q6ZN16 1313 aa25■■□□□ 1.59
COL1A2-204ENST00000467931 IQCA1LA6NCM1 817 aa24.99■■□□□ 1.59
COL1A2-204ENST00000467931 ERVV-1B6SEH8 477 aa24.99■■□□□ 1.59
COL1A2-204ENST00000467931 POTEIP0CG38 1075 aa24.99■■□□□ 1.59
COL1A2-204ENST00000467931 POTEJP0CG39 1038 aa24.99■■□□□ 1.59
COL1A2-204ENST00000467931 GPTP24298 496 aa24.99■■□□□ 1.59
COL1A2-204ENST00000467931 TTLL7Q6ZT98 887 aa24.99■■□□□ 1.59
COL1A2-204ENST00000467931 RTKN2Q8IZC4 609 aa24.99■■□□□ 1.59
COL1A2-204ENST00000467931 ABCC12Q96J65 1359 aa24.99■■□□□ 1.59
COL1A2-204ENST00000467931 ZBTB3Q9H5J0 574 aa24.99■■□□□ 1.59
COL1A2-204ENST00000467931 ZNF541Q9H0D2 1346 aa24.96■■□□□ 1.59
COL1A2-204ENST00000467931 COL13A1Q5TAT6 717 aaPredicted RBP24.96■■□□□ 1.59
COL1A2-204ENST00000467931 RPGRQ92834 1020 aaKnown RBP24.96■■□□□ 1.59
COL1A2-204ENST00000467931 TSPYL4Q9UJ04 414 aa24.96■■□□□ 1.59
COL1A2-204ENST00000467931 SYNE4Q8N205 404 aa24.95■■□□□ 1.58
COL1A2-204ENST00000467931 HSPA1AP0DMV8 641 aaKnown RBP24.94■■□□□ 1.58
COL1A2-204ENST00000467931 HSPA1BP0DMV9 641 aaKnown RBP24.94■■□□□ 1.58
COL1A2-204ENST00000467931 IARSP41252 1262 aaKnown RBP24.94■■□□□ 1.58
COL1A2-204ENST00000467931 EAPPQ56P03 285 aaPredicted RBP24.94■■□□□ 1.58
COL1A2-204ENST00000467931 L3MBTL3Q96JM7 780 aaPredicted RBP24.94■■□□□ 1.58
COL1A2-204ENST00000467931 TAF1DQ9H5J8 278 aaPredicted RBP24.94■■□□□ 1.58
COL1A2-204ENST00000467931 ANKRD36CQ5JPF3 1778 aa24.93■■□□□ 1.58
COL1A2-204ENST00000467931 UBN2Q6ZU65 1347 aa24.93■■□□□ 1.58
COL1A2-204ENST00000467931 LDHDQ86WU2 507 aa24.93■■□□□ 1.58
COL1A2-204ENST00000467931 CREBZFQ9NS37 354 aa24.93■■□□□ 1.58
COL1A2-204ENST00000467931 CRY2Q49AN0 593 aa24.92■■□□□ 1.58
COL1A2-204ENST00000467931 MKRN1Q9UHC7 482 aaKnown RBP24.92■■□□□ 1.58
COL1A2-204ENST00000467931 HACL1Q9UJ83 578 aa24.92■■□□□ 1.58
COL1A2-204ENST00000467931 IBTKQ9P2D0 1353 aaPredicted RBP24.92■■□□□ 1.58
COL1A2-204ENST00000467931 ERBB4Q15303 1308 aa24.91■■□□□ 1.58
COL1A2-204ENST00000467931 EIF2S2P20042 333 aaKnown RBP24.91■■□□□ 1.58
COL1A2-204ENST00000467931 RIPK4P57078 832 aa24.91■■□□□ 1.58
COL1A2-204ENST00000467931 SUSD4Q5VX71 490 aa24.91■■□□□ 1.58
COL1A2-204ENST00000467931 CLEC11AQ9Y240 323 aa24.91■■□□□ 1.58
COL1A2-204ENST00000467931 RIC1Q4ADV7 1423 aa24.9■■□□□ 1.58
COL1A2-204ENST00000467931 JDP2Q8WYK2 163 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms