RNA–Protein interactions for RNA: ENST00000467853.5

PSMD6-204, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

TSL 1 (best)

Gene PSMD6, Length 4,583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-204ENST00000467853 MAP3K11Q16584 847 aa7.56□□□□□ -1.2
PSMD6-204ENST00000467853 NGDNQ8NEJ9 315 aaKnown RBP7.56□□□□□ -1.2
PSMD6-204ENST00000467853 XRN1Q8IZH2 1706 aaKnown RBP7.56□□□□□ -1.2
PSMD6-204ENST00000467853 CASTP20810 708 aaKnown RBP7.56□□□□□ -1.2
PSMD6-204ENST00000467853 GJB2P29033 226 aa7.56□□□□□ -1.2
PSMD6-204ENST00000467853 SCAND2PQ9GZW5 306 aaPredicted RBP7.56□□□□□ -1.2
PSMD6-204ENST00000467853 FAM200AQ8TCP9 573 aa7.56□□□□□ -1.2
PSMD6-204ENST00000467853 EVI5LQ96CN4 794 aa7.56□□□□□ -1.2
PSMD6-204ENST00000467853 EYA1Q99502 592 aa7.56□□□□□ -1.2
PSMD6-204ENST00000467853 GTPBP4Q9BZE4 634 aaKnown RBP7.56□□□□□ -1.2
PSMD6-204ENST00000467853 NUP62CLQ9H1M0 184 aa7.56□□□□□ -1.2
PSMD6-204ENST00000467853 DDX19AQ9NUU7 478 aaKnown RBP7.56□□□□□ -1.2
PSMD6-204ENST00000467853 ZNF219Q9P2Y4 722 aaPredicted RBP7.56□□□□□ -1.2
PSMD6-204ENST00000467853 ELP1O95163 1332 aa7.55□□□□□ -1.2
PSMD6-204ENST00000467853 NCKAP5LQ9HCH0 1330 aa7.55□□□□□ -1.2
PSMD6-204ENST00000467853 TMEM2Q9UHN6 1383 aa7.55□□□□□ -1.2
PSMD6-204ENST00000467853 IFIT2P09913 472 aaKnown RBP7.55□□□□□ -1.2
PSMD6-204ENST00000467853 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.55□□□□□ -1.2
PSMD6-204ENST00000467853 CHMP4CQ96CF2 233 aa7.55□□□□□ -1.2
PSMD6-204ENST00000467853 LRRC37A3O60309 1634 aa7.55□□□□□ -1.2
PSMD6-204ENST00000467853 PDCL2Q8N4E4 241 aa7.55□□□□□ -1.2
PSMD6-204ENST00000467853 PI4K2BQ8TCG2 481 aa7.55□□□□□ -1.2
PSMD6-204ENST00000467853 JAKMIP1Q96N16 626 aaKnown RBP7.55□□□□□ -1.2
PSMD6-204ENST00000467853 ECHDC1Q9NTX5 307 aa7.55□□□□□ -1.2
PSMD6-204ENST00000467853 EID1Q9Y6B2 187 aa7.55□□□□□ -1.2
PSMD6-204ENST00000467853 PEAK1Q9H792 1746 aa7.55□□□□□ -1.2
PSMD6-204ENST00000467853 FOXO3O43524 673 aa7.55□□□□□ -1.2
PSMD6-204ENST00000467853 SYCP1Q15431 976 aa7.55□□□□□ -1.2
PSMD6-204ENST00000467853 RUFY3Q7L099 469 aa7.55□□□□□ -1.2
PSMD6-204ENST00000467853 CHAMP1Q96JM3 812 aa7.55□□□□□ -1.2
PSMD6-204ENST00000467853 PLEKHG1Q9ULL1 1385 aa7.55□□□□□ -1.2
PSMD6-204ENST00000467853 VPS37CA5D8V6 355 aaPredicted RBP7.54□□□□□ -1.2
PSMD6-204ENST00000467853 CWC27Q6UX04 472 aaKnown RBP7.54□□□□□ -1.2
PSMD6-204ENST00000467853 UNC5CLQ8IV45 518 aa7.54□□□□□ -1.2
PSMD6-204ENST00000467853 DNAAF4Q8WXU2 420 aa7.54□□□□□ -1.2
PSMD6-204ENST00000467853 ZSWIM6Q9HCJ5 1215 aa7.54□□□□□ -1.2
PSMD6-204ENST00000467853 ROBO2Q9HCK4 1378 aa7.54□□□□□ -1.2
PSMD6-204ENST00000467853 SOX12O15370 315 aa7.54□□□□□ -1.2
PSMD6-204ENST00000467853 ALDH1L1O75891 902 aa7.54□□□□□ -1.2
PSMD6-204ENST00000467853 LARP1BQ659C4 914 aaKnown RBP7.54□□□□□ -1.2
PSMD6-204ENST00000467853 CCDC83Q8IWF9 413 aa7.54□□□□□ -1.2
PSMD6-204ENST00000467853 DRC7Q8IY82 874 aa7.54□□□□□ -1.2
PSMD6-204ENST00000467853 KCNB2Q92953 911 aa7.54□□□□□ -1.2
PSMD6-204ENST00000467853 TTC12Q9H892 705 aaPredicted RBP7.54□□□□□ -1.2
PSMD6-204ENST00000467853 HYPKQ9NX55 129 aa7.54□□□□□ -1.2
PSMD6-204ENST00000467853 MLECQ14165 292 aa7.54□□□□□ -1.2
PSMD6-204ENST00000467853 KIAA1524Q8TCG1 905 aa7.54□□□□□ -1.2
PSMD6-204ENST00000467853 MTMR6Q9Y217 621 aa7.54□□□□□ -1.2
PSMD6-204ENST00000467853 NEMFO60524 1076 aa7.54□□□□□ -1.2
PSMD6-204ENST00000467853 FAM69CQ0P6D2 419 aa7.54□□□□□ -1.2
PSMD6-204ENST00000467853 HMG20BQ9P0W2 317 aa7.54□□□□□ -1.2
PSMD6-204ENST00000467853 KRT32Q14532 448 aa7.53□□□□□ -1.2
PSMD6-204ENST00000467853 FUCA2Q9BTY2 467 aa7.53□□□□□ -1.2
PSMD6-204ENST00000467853 ALDH8A1Q9H2A2 487 aaPredicted RBP7.53□□□□□ -1.2
PSMD6-204ENST00000467853 TNMDQ9H2S6 317 aa7.53□□□□□ -1.2
PSMD6-204ENST00000467853 U3KPZ7 1027 aaPredicted RBP7.53□□□□□ -1.2
PSMD6-204ENST00000467853 HOXD11P31277 338 aaPredicted RBP7.53□□□□□ -1.2
PSMD6-204ENST00000467853 DHX8Q14562 1220 aaKnown RBP7.53□□□□□ -1.2
PSMD6-204ENST00000467853 GIMAP6Q6P9H5 292 aa7.53□□□□□ -1.2
PSMD6-204ENST00000467853 NECTIN2Q92692 538 aa7.53□□□□□ -1.2
PSMD6-204ENST00000467853 FEZ1Q99689 392 aa7.53□□□□□ -1.2
PSMD6-204ENST00000467853 PAXBP1Q9Y5B6 917 aa7.53□□□□□ -1.2
PSMD6-204ENST00000467853 DNM1Q05193 864 aaKnown RBP7.53□□□□□ -1.2
PSMD6-204ENST00000467853 MTX1Q13505 466 aa7.53□□□□□ -1.2
PSMD6-204ENST00000467853 ADGRL3Q9HAR2 1447 aa7.53□□□□□ -1.2
PSMD6-204ENST00000467853 NPHP3Q7Z494 1330 aa7.52□□□□□ -1.2
PSMD6-204ENST00000467853 MAP4K4O95819 1239 aaPredicted RBP7.52□□□□□ -1.2
PSMD6-204ENST00000467853 PRPF40BQ6NWY9 871 aaKnown RBP7.52□□□□□ -1.2
PSMD6-204ENST00000467853 ZNF830Q96NB3 372 aaPredicted RBP7.52□□□□□ -1.2
PSMD6-204ENST00000467853 C9orf78Q9NZ63 289 aaPredicted RBP7.52□□□□□ -1.2
PSMD6-204ENST00000467853 NLRP6P59044 892 aa7.52□□□□□ -1.21
PSMD6-204ENST00000467853 BLOC1S2Q6QNY1 142 aa7.52□□□□□ -1.21
PSMD6-204ENST00000467853 CTAGE5O15320 804 aa7.52□□□□□ -1.21
PSMD6-204ENST00000467853 DMTNQ08495 405 aa7.52□□□□□ -1.21
PSMD6-204ENST00000467853 G3BP1Q13283 466 aaKnown RBP eCLIP7.52□□□□□ -1.212e-6■■■■□ 22
PSMD6-204ENST00000467853 SPATA32Q96LK8 384 aa7.52□□□□□ -1.21
PSMD6-204ENST00000467853 DDX58O95786 925 aaKnown RBP7.52□□□□□ -1.21
PSMD6-204ENST00000467853 TYRO3Q06418 890 aa7.52□□□□□ -1.21
PSMD6-204ENST00000467853 CFAP45Q9UL16 551 aa7.52□□□□□ -1.21
PSMD6-204ENST00000467853 SPG7Q9UQ90 795 aa7.52□□□□□ -1.21
PSMD6-204ENST00000467853 ANKARQ7Z5J8 1434 aa7.52□□□□□ -1.21
PSMD6-204ENST00000467853 SMTNL1A8MU46 457 aa7.51□□□□□ -1.21
PSMD6-204ENST00000467853 GOLGA6L19H0YKK7 550 aa7.51□□□□□ -1.21
PSMD6-204ENST00000467853 HOXC9P31274 260 aa7.51□□□□□ -1.21
PSMD6-204ENST00000467853 TEFQ10587 303 aa7.51□□□□□ -1.21
PSMD6-204ENST00000467853 PPP4R3BQ5MIZ7 849 aa7.51□□□□□ -1.21
PSMD6-204ENST00000467853 BEND3Q5T5X7 828 aa7.51□□□□□ -1.21
PSMD6-204ENST00000467853 RASEFQ8IZ41 740 aa7.51□□□□□ -1.21
PSMD6-204ENST00000467853 EIF2S2P20042 333 aaKnown RBP7.51□□□□□ -1.21
PSMD6-204ENST00000467853 IL17REQ8NFR9 667 aa7.51□□□□□ -1.21
PSMD6-204ENST00000467853 ZSCAN16Q9H4T2 348 aaPredicted RBP7.51□□□□□ -1.21
PSMD6-204ENST00000467853 CGNQ9P2M7 1197 aaKnown RBP7.51□□□□□ -1.21
PSMD6-204ENST00000467853 DBF4Q9UBU7 674 aaPredicted RBP7.51□□□□□ -1.21
PSMD6-204ENST00000467853 ADAMTS13Q76LX8 1427 aa7.51□□□□□ -1.21
PSMD6-204ENST00000467853 KIF20AO95235 890 aa7.51□□□□□ -1.21
PSMD6-204ENST00000467853 CDC25BP30305 580 aa7.51□□□□□ -1.21
PSMD6-204ENST00000467853 CREB3L3Q68CJ9 461 aa7.51□□□□□ -1.21
PSMD6-204ENST00000467853 TRIM5Q9C035 493 aa7.51□□□□□ -1.21
PSMD6-204ENST00000467853 BCL2L12Q9HB09 334 aa7.51□□□□□ -1.21
PSMD6-204ENST00000467853 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms