RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 ZNF330Q9Y3S2 320 aaPredicted RBP13.67□□□□□ -0.22
SSR3-205ENST00000467789 USP16Q9Y5T5 823 aa13.67□□□□□ -0.22
SSR3-205ENST00000467789 LAMB4A4D0S4 1761 aa13.67□□□□□ -0.22
SSR3-205ENST00000467789 BCORQ6W2J9 1755 aa13.67□□□□□ -0.22
SSR3-205ENST00000467789 KDM3BQ7LBC6 1761 aa13.67□□□□□ -0.22
SSR3-205ENST00000467789 CARMIL3Q8ND23 1372 aa13.67□□□□□ -0.22
SSR3-205ENST00000467789 DLEC1Q9Y238 1755 aa13.66□□□□□ -0.22
SSR3-205ENST00000467789 ZEB1P37275 1124 aaPredicted RBP13.66□□□□□ -0.22
SSR3-205ENST00000467789 LMOD3Q0VAK6 560 aa13.66□□□□□ -0.22
SSR3-205ENST00000467789 DZIP3Q86Y13 1208 aaKnown RBP13.66□□□□□ -0.22
SSR3-205ENST00000467789 IFNLR1Q8IU57 520 aaPredicted RBP13.66□□□□□ -0.22
SSR3-205ENST00000467789 TBC1D2BQ9UPU7 963 aa13.66□□□□□ -0.22
SSR3-205ENST00000467789 CAMTA2O94983 1202 aa13.65□□□□□ -0.22
SSR3-205ENST00000467789 BABAM1Q9NWV8 329 aa13.65□□□□□ -0.22
SSR3-205ENST00000467789 ZNF652Q9Y2D9 606 aa13.65□□□□□ -0.22
SSR3-205ENST00000467789 C1QTNF8P60827 252 aa13.64□□□□□ -0.23
SSR3-205ENST00000467789 TBC1D9BQ66K14 1250 aa13.64□□□□□ -0.23
SSR3-205ENST00000467789 ARHGAP27Q6ZUM4 889 aa13.64□□□□□ -0.23
SSR3-205ENST00000467789 SETDB2Q96T68 719 aa13.64□□□□□ -0.23
SSR3-205ENST00000467789 GPBP1L1Q9HC44 474 aaPredicted RBP13.64□□□□□ -0.23
SSR3-205ENST00000467789 H0YIN7 160 aa13.63□□□□□ -0.23
SSR3-205ENST00000467789 CHRNA5P30532 468 aa13.63□□□□□ -0.23
SSR3-205ENST00000467789 PDE6BP35913 854 aa13.63□□□□□ -0.23
SSR3-205ENST00000467789 RIPK4P57078 832 aa13.63□□□□□ -0.23
SSR3-205ENST00000467789 WDR43Q15061 677 aaKnown RBP eCLIP13.63□□□□□ -0.23
SSR3-205ENST00000467789 CHADLQ6NUI6 762 aa13.63□□□□□ -0.23
SSR3-205ENST00000467789 BICDL1Q6ZP65 573 aa13.63□□□□□ -0.23
SSR3-205ENST00000467789 BRIP1Q9BX63 1249 aa13.63□□□□□ -0.23
SSR3-205ENST00000467789 PRAMEF22A3QJZ6 481 aa13.62□□□□□ -0.23
SSR3-205ENST00000467789 EIF4A1P60842 406 aaKnown RBP13.62□□□□□ -0.23
SSR3-205ENST00000467789 PRKRIP1Q9H875 184 aaPredicted RBP13.62□□□□□ -0.23
SSR3-205ENST00000467789 NBPF26B4DH59 902 aa13.61□□□□□ -0.23
SSR3-205ENST00000467789 TMPOP42166 694 aaKnown RBP13.61□□□□□ -0.23
SSR3-205ENST00000467789 PRR5LQ6MZQ0 368 aa13.61□□□□□ -0.23
SSR3-205ENST00000467789 NBPF10Q6P3W6 841 aaKnown RBP13.61□□□□□ -0.23
SSR3-205ENST00000467789 NBPF15Q8N660 670 aa13.61□□□□□ -0.23
SSR3-205ENST00000467789 TTLL6Q8N841 843 aa13.61□□□□□ -0.23
SSR3-205ENST00000467789 CNBD1Q8NA66 436 aa13.61□□□□□ -0.23
SSR3-205ENST00000467789 MIS18AQ9NYP9 233 aa13.61□□□□□ -0.23
SSR3-205ENST00000467789 FARP1Q9Y4F1 1045 aaPredicted RBP13.61□□□□□ -0.23
SSR3-205ENST00000467789 ANKRD31Q8N7Z5 1873 aa13.61□□□□□ -0.23
SSR3-205ENST00000467789 ERBB4Q15303 1308 aa13.61□□□□□ -0.23
SSR3-205ENST00000467789 NPHP1O15259 732 aa13.6□□□□□ -0.23
SSR3-205ENST00000467789 ST5P78524 1137 aa13.6□□□□□ -0.23
SSR3-205ENST00000467789 C2CD5Q86YS7 1000 aa13.6□□□□□ -0.23
SSR3-205ENST00000467789 RUNDC1Q96C34 613 aa13.6□□□□□ -0.23
SSR3-205ENST00000467789 ERVV-1B6SEH8 477 aa13.59□□□□□ -0.23
SSR3-205ENST00000467789 MNX1P50219 401 aaPredicted RBP13.59□□□□□ -0.23
SSR3-205ENST00000467789 THUMPD2Q9BTF0 503 aaKnown RBP13.59□□□□□ -0.23
SSR3-205ENST00000467789 TSPYL4Q9UJ04 414 aa13.59□□□□□ -0.23
SSR3-205ENST00000467789 ZC3H4Q9UPT8 1303 aaKnown RBP13.59□□□□□ -0.23
SSR3-205ENST00000467789 SBF1O95248 1867 aa13.59□□□□□ -0.23
SSR3-205ENST00000467789 PIP4K2AP48426 406 aaPredicted RBP13.58□□□□□ -0.24
SSR3-205ENST00000467789 TPTE2Q6XPS3 522 aa13.58□□□□□ -0.24
SSR3-205ENST00000467789 NBPF5PQ86XG9 351 aaPredicted RBP13.58□□□□□ -0.24
SSR3-205ENST00000467789 SPOCK2Q92563 424 aa13.58□□□□□ -0.24
SSR3-205ENST00000467789 C9orf131Q5VYM1 1079 aa13.57□□□□□ -0.24
SSR3-205ENST00000467789 NUP98P52948 1817 aa13.56□□□□□ -0.24
SSR3-205ENST00000467789 STYK1Q6J9G0 422 aa13.56□□□□□ -0.24
SSR3-205ENST00000467789 KIF6Q6ZMV9 814 aa13.56□□□□□ -0.24
SSR3-205ENST00000467789 ZNF526Q8TF50 670 aaPredicted RBP13.56□□□□□ -0.24
SSR3-205ENST00000467789 CNKSR1Q969H4 720 aa13.56□□□□□ -0.24
SSR3-205ENST00000467789 ADAMTS8Q9UP79 889 aa13.56□□□□□ -0.24
SSR3-205ENST00000467789 NIP7Q9Y221 180 aaKnown RBP eCLIP13.56□□□□□ -0.24
SSR3-205ENST00000467789 MAP3K15Q6ZN16 1313 aa13.56□□□□□ -0.24
SSR3-205ENST00000467789 COL11A2P13942 1736 aaPredicted RBP13.56□□□□□ -0.24
SSR3-205ENST00000467789 ARFGEF2Q9Y6D5 1785 aa13.55□□□□□ -0.24
SSR3-205ENST00000467789 SRGNP10124 158 aa13.55□□□□□ -0.24
SSR3-205ENST00000467789 LMNB1P20700 586 aa13.55□□□□□ -0.24
SSR3-205ENST00000467789 SOGA3Q5TF21 947 aa13.55□□□□□ -0.24
SSR3-205ENST00000467789 ZNF622Q969S3 477 aaKnown RBP eCLIP13.55□□□□□ -0.24
SSR3-205ENST00000467789 MASTLQ96GX5 879 aa13.55□□□□□ -0.24
SSR3-205ENST00000467789 NYXQ9GZU5 481 aa13.55□□□□□ -0.24
SSR3-205ENST00000467789 RNF181Q9P0P0 153 aa13.55□□□□□ -0.24
SSR3-205ENST00000467789 RRP7AQ9Y3A4 280 aaKnown RBP13.55□□□□□ -0.24
SSR3-205ENST00000467789 KDM2BQ8NHM5 1336 aa13.55□□□□□ -0.24
SSR3-205ENST00000467789 SENP3-EIF4A1A0A087X0R7 540 aa13.54□□□□□ -0.24
SSR3-205ENST00000467789 KLRG2A4D1S0 409 aaPredicted RBP13.54□□□□□ -0.24
SSR3-205ENST00000467789 CHL1O00533 1208 aa13.54□□□□□ -0.24
SSR3-205ENST00000467789 CCDC146Q8IYE0 955 aa13.54□□□□□ -0.24
SSR3-205ENST00000467789 IBTKQ9P2D0 1353 aaPredicted RBP13.54□□□□□ -0.24
SSR3-205ENST00000467789 FER1L6Q2WGJ9 1857 aa13.53□□□□□ -0.24
SSR3-205ENST00000467789 KIF3CO14782 793 aa13.53□□□□□ -0.24
SSR3-205ENST00000467789 MYL6BP14649 208 aa13.53□□□□□ -0.24
SSR3-205ENST00000467789 NEUROD2Q15784 382 aa13.53□□□□□ -0.24
SSR3-205ENST00000467789 HLFQ16534 295 aa13.53□□□□□ -0.24
SSR3-205ENST00000467789 TRIM35Q9UPQ4 493 aa13.53□□□□□ -0.24
SSR3-205ENST00000467789 LTBP3Q9NS15 1303 aa13.53□□□□□ -0.24
SSR3-205ENST00000467789 HOXB7P09629 217 aa13.52□□□□□ -0.25
SSR3-205ENST00000467789 NPR1P16066 1061 aa13.52□□□□□ -0.25
SSR3-205ENST00000467789 GTF2E1P29083 439 aaPredicted RBP13.52□□□□□ -0.25
SSR3-205ENST00000467789 CALD1Q05682 793 aaKnown RBP13.52□□□□□ -0.25
SSR3-205ENST00000467789 GIGYF2Q6Y7W6 1299 aaKnown RBP13.52□□□□□ -0.25
SSR3-205ENST00000467789 CCDC24Q8N4L8 307 aa13.52□□□□□ -0.25
SSR3-205ENST00000467789 NGEFQ8N5V2 710 aa13.52□□□□□ -0.25
SSR3-205ENST00000467789 RIC1Q4ADV7 1423 aa13.52□□□□□ -0.25
SSR3-205ENST00000467789 TNRC6CQ9HCJ0 1690 aaKnown RBP13.52□□□□□ -0.25
SSR3-205ENST00000467789 CCDC88AQ3V6T2 1871 aa13.52□□□□□ -0.25
SSR3-205ENST00000467789 DICER1Q9UPY3 1922 aaKnown RBP13.51□□□□□ -0.25
SSR3-205ENST00000467789 NFKBIEO00221 500 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms