RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 UCN2Q96RP3 112 aa9.01□□□□□ -0.97
SMC4-207ENST00000467263 PLVAPQ9BX97 442 aa9.01□□□□□ -0.97
SMC4-207ENST00000467263 TPCN2Q8NHX9 752 aa9□□□□□ -0.97
SMC4-207ENST00000467263 ZNF232Q9UNY5 417 aa9□□□□□ -0.97
SMC4-207ENST00000467263 DOC2BQ14184 412 aa8.99□□□□□ -0.97
SMC4-207ENST00000467263 HSH2DQ96JZ2 352 aa8.99□□□□□ -0.97
SMC4-207ENST00000467263 TSPAN10Q9H1Z9 355 aaPredicted RBP8.99□□□□□ -0.97
SMC4-207ENST00000467263 LZTS3O60299 673 aaPredicted RBP8.98□□□□□ -0.97
SMC4-207ENST00000467263 COL9A3Q14050 684 aaPredicted RBP8.98□□□□□ -0.97
SMC4-207ENST00000467263 C8orf86Q6ZUL3 223 aa8.98□□□□□ -0.97
SMC4-207ENST00000467263 RAB44Q7Z6P3 723 aaPredicted RBP8.98□□□□□ -0.97
SMC4-207ENST00000467263 NOP53Q9NZM5 478 aaKnown RBP8.98□□□□□ -0.97
SMC4-207ENST00000467263 STARD13Q9Y3M8 1113 aa8.98□□□□□ -0.97
SMC4-207ENST00000467263 ELOA3CA0A087WX78 387 aaPredicted RBP8.97□□□□□ -0.97
SMC4-207ENST00000467263 USP17L3A6NCW0 530 aa8.97□□□□□ -0.97
SMC4-207ENST00000467263 USP17L4A6NCW7 530 aa8.97□□□□□ -0.97
SMC4-207ENST00000467263 ELOA3DA6NLF2 546 aaPredicted RBP8.97□□□□□ -0.97
SMC4-207ENST00000467263 LAMC2Q13753 1193 aa8.97□□□□□ -0.97
SMC4-207ENST00000467263 ELOA3BQ3SY89 546 aa8.97□□□□□ -0.97
SMC4-207ENST00000467263 CCDC102BQ68D86 513 aa8.97□□□□□ -0.97
SMC4-207ENST00000467263 USP17L2Q6R6M4 530 aa8.97□□□□□ -0.97
SMC4-207ENST00000467263 USP17L1Q7RTZ2 530 aa8.97□□□□□ -0.97
SMC4-207ENST00000467263 ELOA3Q8NG57 546 aa8.97□□□□□ -0.97
SMC4-207ENST00000467263 HCN4Q9Y3Q4 1203 aa8.97□□□□□ -0.97
SMC4-207ENST00000467263 SERTM1A2A2V5 107 aa8.96□□□□□ -0.98
SMC4-207ENST00000467263 PIK3R2O00459 728 aa8.96□□□□□ -0.98
SMC4-207ENST00000467263 FLIIQ13045 1269 aa8.96□□□□□ -0.98
SMC4-207ENST00000467263 ZNF280CQ8ND82 737 aa8.96□□□□□ -0.98
SMC4-207ENST00000467263 FAM229AH3BQW9 127 aa8.95□□□□□ -0.98
SMC4-207ENST00000467263 DKK1O94907 266 aa8.95□□□□□ -0.98
SMC4-207ENST00000467263 HDGFL1Q5TGJ6 251 aa8.95□□□□□ -0.98
SMC4-207ENST00000467263 Q8N3U1 123 aa8.95□□□□□ -0.98
SMC4-207ENST00000467263 RHPN1Q8TCX5 695 aa8.95□□□□□ -0.98
SMC4-207ENST00000467263 SIN3BO75182 1162 aa8.94□□□□□ -0.98
SMC4-207ENST00000467263 PLEKHM2Q8IWE5 1019 aa8.94□□□□□ -0.98
SMC4-207ENST00000467263 TSEN2Q8NCE0 465 aaKnown RBP8.94□□□□□ -0.98
SMC4-207ENST00000467263 SFI1A8K8P3 1242 aa8.93□□□□□ -0.98
SMC4-207ENST00000467263 C21orf2O43822 256 aa8.93□□□□□ -0.98
SMC4-207ENST00000467263 ALBP02768 609 aa8.93□□□□□ -0.98
SMC4-207ENST00000467263 OGFOD1Q8N543 542 aa8.93□□□□□ -0.98
SMC4-207ENST00000467263 PHACTR1Q9C0D0 580 aa8.93□□□□□ -0.98
SMC4-207ENST00000467263 ADARB2-AS1A8MUL3 147 aa8.92□□□□□ -0.98
SMC4-207ENST00000467263 M0R082 166 aa8.92□□□□□ -0.98
SMC4-207ENST00000467263 UBTFP17480 764 aaKnown RBP8.92□□□□□ -0.98
SMC4-207ENST00000467263 SPEM2Q0P670 501 aa8.92□□□□□ -0.98
SMC4-207ENST00000467263 POTEAQ6S8J7 498 aa8.92□□□□□ -0.98
SMC4-207ENST00000467263 TRIM50Q86XT4 487 aa8.92□□□□□ -0.98
SMC4-207ENST00000467263 ZNF417Q8TAU3 575 aa8.92□□□□□ -0.98
SMC4-207ENST00000467263 ZNF594Q96JF6 807 aaPredicted RBP8.92□□□□□ -0.98
SMC4-207ENST00000467263 ZNF587Q96SQ5 575 aaPredicted RBP8.92□□□□□ -0.98
SMC4-207ENST00000467263 NEUROD4Q9HD90 331 aa8.92□□□□□ -0.98
SMC4-207ENST00000467263 MKRN1Q9UHC7 482 aaKnown RBP8.92□□□□□ -0.98
SMC4-207ENST00000467263 GTF3C3Q9Y5Q9 886 aa8.92□□□□□ -0.98
SMC4-207ENST00000467263 ATP9BO43861 1147 aa8.91□□□□□ -0.98
SMC4-207ENST00000467263 RAD21O60216 631 aa8.91□□□□□ -0.98
SMC4-207ENST00000467263 SPATA31C1P0DKV0 1188 aa8.91□□□□□ -0.98
SMC4-207ENST00000467263 PSMA6P60900 246 aaKnown RBP8.91□□□□□ -0.98
SMC4-207ENST00000467263 GAS2L2Q8NHY3 880 aa8.91□□□□□ -0.98
SMC4-207ENST00000467263 TNFRSF25Q93038 417 aa8.91□□□□□ -0.98
SMC4-207ENST00000467263 CEP63Q96MT8 703 aa8.91□□□□□ -0.98
SMC4-207ENST00000467263 SEMA6BQ9H3T3 888 aa8.91□□□□□ -0.98
SMC4-207ENST00000467263 BRD7Q9NPI1 651 aa8.91□□□□□ -0.98
SMC4-207ENST00000467263 LGR5O75473 907 aa8.9□□□□□ -0.98
SMC4-207ENST00000467263 ALAS2P22557 587 aa8.9□□□□□ -0.98
SMC4-207ENST00000467263 GATA4P43694 442 aa8.9□□□□□ -0.98
SMC4-207ENST00000467263 TYRO3Q06418 890 aa8.9□□□□□ -0.98
SMC4-207ENST00000467263 MICALL1Q8N3F8 863 aa8.9□□□□□ -0.98
SMC4-207ENST00000467263 SUSD3Q96L08 255 aa8.9□□□□□ -0.98
SMC4-207ENST00000467263 GPC6Q9Y625 555 aaPredicted RBP8.9□□□□□ -0.98
SMC4-207ENST00000467263 ADH7P40394 386 aa8.89□□□□□ -0.99
SMC4-207ENST00000467263 HIRAP54198 1017 aaPredicted RBP8.89□□□□□ -0.99
SMC4-207ENST00000467263 C1orf53Q5VUE5 145 aa8.89□□□□□ -0.99
SMC4-207ENST00000467263 WWC1Q8IX03 1113 aa8.89□□□□□ -0.99
SMC4-207ENST00000467263 NID1P14543 1247 aa8.88□□□□□ -0.99
SMC4-207ENST00000467263 ATP1A2P50993 1020 aa8.88□□□□□ -0.99
SMC4-207ENST00000467263 RSPO4Q2I0M5 234 aaPredicted RBP8.88□□□□□ -0.99
SMC4-207ENST00000467263 C20orf204Q6ZNR8 217 aa8.88□□□□□ -0.99
SMC4-207ENST00000467263 LARGE2Q8N3Y3 721 aa8.88□□□□□ -0.99
SMC4-207ENST00000467263 CLUAP1Q96AJ1 413 aa8.88□□□□□ -0.99
SMC4-207ENST00000467263 PALM3A6NDB9 673 aaPredicted RBP8.87□□□□□ -0.99
SMC4-207ENST00000467263 PPP1R12BO60237 982 aaPredicted RBP8.87□□□□□ -0.99
SMC4-207ENST00000467263 GRIK4Q16099 956 aa8.87□□□□□ -0.99
SMC4-207ENST00000467263 SIX5Q8N196 739 aa8.87□□□□□ -0.99
SMC4-207ENST00000467263 TPSG1Q9NRR2 321 aa8.87□□□□□ -0.99
SMC4-207ENST00000467263 KCNQ4P56696 695 aa8.86□□□□□ -0.99
SMC4-207ENST00000467263 FOXD4L6Q3SYB3 417 aaPredicted RBP8.86□□□□□ -0.99
SMC4-207ENST00000467263 FOXD4L3Q6VB84 417 aaPredicted RBP8.86□□□□□ -0.99
SMC4-207ENST00000467263 ALDH16A1Q8IZ83 802 aa8.86□□□□□ -0.99
SMC4-207ENST00000467263 KCNH4Q9UQ05 1017 aa8.86□□□□□ -0.99
SMC4-207ENST00000467263 ATAD2Q6PL18 1390 aa8.86□□□□□ -0.99
SMC4-207ENST00000467263 M0R2N6 131 aa8.85□□□□□ -0.99
SMC4-207ENST00000467263 NKAPLQ5M9Q1 402 aa8.85□□□□□ -0.99
SMC4-207ENST00000467263 BHMTQ93088 406 aa8.85□□□□□ -0.99
SMC4-207ENST00000467263 PRDM6Q9NQX0 595 aa8.85□□□□□ -0.99
SMC4-207ENST00000467263 PRRT3Q5FWE3 981 aa8.84□□□□□ -0.99
SMC4-207ENST00000467263 CHMP7Q8WUX9 453 aaPredicted RBP8.84□□□□□ -0.99
SMC4-207ENST00000467263 SCG3Q8WXD2 468 aaKnown RBP8.84□□□□□ -0.99
SMC4-207ENST00000467263 NGLY1Q96IV0 654 aa8.84□□□□□ -0.99
SMC4-207ENST00000467263 C2orf49Q9BVC5 232 aaPredicted RBP8.84□□□□□ -0.99
SMC4-207ENST00000467263 TFIP11Q9UBB9 837 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms