RNA–Protein interactions for RNA: ENST00000467134.5

MUC1-216, Transcript of mucin 1, cell surface associated, human

TSL 1 (best)

Gene MUC1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-216	ENST00000467134	SIK1	P57059	783 aa		13.79	□□□□□ -0.2
MUC1-216	ENST00000467134	CEP85	Q6P2H3	762 aa		13.79	□□□□□ -0.2
MUC1-216	ENST00000467134	RIC3	Q7Z5B4	369 aa		13.79	□□□□□ -0.2
MUC1-216	ENST00000467134	SLC4A9	Q96Q91	983 aa		13.79	□□□□□ -0.2
MUC1-216	ENST00000467134	MYH14	Q7Z406	1995 aa	Known RBP	13.79	□□□□□ -0.2
MUC1-216	ENST00000467134		A0A0G2JS52	829 aa		13.78	□□□□□ -0.2
MUC1-216	ENST00000467134	A1BG	P04217	495 aa		13.78	□□□□□ -0.2
MUC1-216	ENST00000467134	MYL6B	P14649	208 aa		13.78	□□□□□ -0.2
MUC1-216	ENST00000467134	MYT1	Q01538	1121 aa		13.78	□□□□□ -0.2
MUC1-216	ENST00000467134	MTX1	Q13505	466 aa		13.78	□□□□□ -0.2
MUC1-216	ENST00000467134	SIRT2	Q8IXJ6	389 aa		13.78	□□□□□ -0.2
MUC1-216	ENST00000467134	RBM42	Q9BTD8	480 aa	Known RBP	13.78	□□□□□ -0.2
MUC1-216	ENST00000467134	SCN7A	Q01118	1682 aa		13.78	□□□□□ -0.2
MUC1-216	ENST00000467134	TRIM28	Q13263	835 aa	Known RBP	13.77	□□□□□ -0.21
MUC1-216	ENST00000467134	CNTNAP4	Q9C0A0	1308 aa		13.77	□□□□□ -0.21
MUC1-216	ENST00000467134	DCTPP1	Q9H773	170 aa		13.77	□□□□□ -0.21
MUC1-216	ENST00000467134	NEURL1B	A8MQ27	555 aa		13.76	□□□□□ -0.21
MUC1-216	ENST00000467134	ERVV-1	B6SEH8	477 aa		13.76	□□□□□ -0.21
MUC1-216	ENST00000467134	GRM8	O00222	908 aa		13.76	□□□□□ -0.21
MUC1-216	ENST00000467134	IGKV5-2	P06315	115 aa		13.76	□□□□□ -0.21
MUC1-216	ENST00000467134	FAM196A	Q6ZSG2	479 aa		13.76	□□□□□ -0.21
MUC1-216	ENST00000467134	ACSBG1	Q96GR2	724 aa		13.76	□□□□□ -0.21
MUC1-216	ENST00000467134	CCDC87	Q9NVE4	849 aa		13.76	□□□□□ -0.21
MUC1-216	ENST00000467134	MAP3K15	Q6ZN16	1313 aa		13.75	□□□□□ -0.21
MUC1-216	ENST00000467134	ATP8B2	P98198	1209 aa		13.75	□□□□□ -0.21
MUC1-216	ENST00000467134	NUCB1	Q02818	461 aa		13.75	□□□□□ -0.21
MUC1-216	ENST00000467134	AIMP1	Q12904	312 aa	Known RBP	13.75	□□□□□ -0.21
MUC1-216	ENST00000467134	GCKR	Q14397	625 aa		13.75	□□□□□ -0.21
MUC1-216	ENST00000467134	HSP90AB3P	Q58FF7	597 aa		13.75	□□□□□ -0.21
MUC1-216	ENST00000467134	RC3H1	Q5TC82	1133 aa	Known RBP	13.75	□□□□□ -0.21
MUC1-216	ENST00000467134	KIF6	Q6ZMV9	814 aa		13.75	□□□□□ -0.21
MUC1-216	ENST00000467134	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.75	□□□□□ -0.21
MUC1-216	ENST00000467134	LAMB2	P55268	1798 aa		13.75	□□□□□ -0.21
MUC1-216	ENST00000467134	C4B	P0C0L5	1744 aa		13.74	□□□□□ -0.21
MUC1-216	ENST00000467134	KCNQ2	O43526	872 aa		13.74	□□□□□ -0.21
MUC1-216	ENST00000467134	EIF5	P55010	431 aa	Known RBP	13.74	□□□□□ -0.21
MUC1-216	ENST00000467134	KRT27	Q7Z3Y8	459 aa		13.74	□□□□□ -0.21
MUC1-216	ENST00000467134	CCDC191	Q8NCU4	936 aa		13.74	□□□□□ -0.21
MUC1-216	ENST00000467134	SSH3	Q8TE77	659 aa		13.74	□□□□□ -0.21
MUC1-216	ENST00000467134	ISCA1	Q9BUE6	129 aa		13.74	□□□□□ -0.21
MUC1-216	ENST00000467134	C1orf115	Q9H7X2	142 aa		13.74	□□□□□ -0.21
MUC1-216	ENST00000467134	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.74	□□□□□ -0.21
MUC1-216	ENST00000467134	PDZRN3	Q9UPQ7	1066 aa		13.74	□□□□□ -0.21
MUC1-216	ENST00000467134	MYH3	P11055	1940 aa		13.73	□□□□□ -0.21
MUC1-216	ENST00000467134	ATP6V1A	P38606	617 aa		13.73	□□□□□ -0.21
MUC1-216	ENST00000467134	POLA2	Q14181	598 aa		13.73	□□□□□ -0.21
MUC1-216	ENST00000467134	INTS5	Q6P9B9	1019 aa	Known RBP	13.73	□□□□□ -0.21
MUC1-216	ENST00000467134	TTLL7	Q6ZT98	887 aa		13.73	□□□□□ -0.21
MUC1-216	ENST00000467134	MYD88	Q99836	296 aa		13.73	□□□□□ -0.21
MUC1-216	ENST00000467134	LRRFIP2	Q9Y608	721 aa	Known RBP	13.73	□□□□□ -0.21
MUC1-216	ENST00000467134	TNS1	Q9HBL0	1735 aa	Known RBP	13.73	□□□□□ -0.21
MUC1-216	ENST00000467134		A0A087WZG4	1122 aa		13.72	□□□□□ -0.21
MUC1-216	ENST00000467134	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.72	□□□□□ -0.21
MUC1-216	ENST00000467134	CRKL	P46109	303 aa	Known RBP	13.72	□□□□□ -0.21
MUC1-216	ENST00000467134	TCIRG1	Q13488	830 aa		13.72	□□□□□ -0.21
MUC1-216	ENST00000467134	ITPK1	Q13572	414 aa		13.72	□□□□□ -0.21
MUC1-216	ENST00000467134	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.72	□□□□□ -0.21
MUC1-216	ENST00000467134	ZBTB1	Q9Y2K1	713 aa		13.72	□□□□□ -0.21
MUC1-216	ENST00000467134		H7C1W4	665 aa		13.71	□□□□□ -0.21
MUC1-216	ENST00000467134	CWF19L2	Q2TBE0	894 aa	Known RBP	13.71	□□□□□ -0.21
MUC1-216	ENST00000467134	CHD1L	Q86WJ1	897 aa		13.71	□□□□□ -0.21
MUC1-216	ENST00000467134	CWC25	Q9NXE8	425 aa	Predicted RBP	13.71	□□□□□ -0.21
MUC1-216	ENST00000467134	C4A	P0C0L4	1744 aa		13.7	□□□□□ -0.22
MUC1-216	ENST00000467134	COL24A1	Q17RW2	1714 aa		13.7	□□□□□ -0.22
MUC1-216	ENST00000467134	UBR3	Q6ZT12	1888 aa		13.7	□□□□□ -0.22
MUC1-216	ENST00000467134	PIP4K2A	P48426	406 aa	Predicted RBP	13.7	□□□□□ -0.22
MUC1-216	ENST00000467134	CASP7	P55210	303 aa		13.7	□□□□□ -0.22
MUC1-216	ENST00000467134	RABL6	Q3YEC7	729 aa	Predicted RBP	13.7	□□□□□ -0.22
MUC1-216	ENST00000467134	HSP90AB4P	Q58FF6	505 aa		13.7	□□□□□ -0.22
MUC1-216	ENST00000467134	NPM2	Q86SE8	214 aa	Known RBP	13.7	□□□□□ -0.22
MUC1-216	ENST00000467134	RAB11FIP3	O75154	756 aa		13.69	□□□□□ -0.22
MUC1-216	ENST00000467134	RXRB	P28702	533 aa		13.69	□□□□□ -0.22
MUC1-216	ENST00000467134	SLC27A3	Q5K4L6	730 aa		13.69	□□□□□ -0.22
MUC1-216	ENST00000467134	NOP58	Q9Y2X3	529 aa	Known RBP	13.69	□□□□□ -0.22
MUC1-216	ENST00000467134	TUBGCP6	Q96RT7	1819 aa		13.69	□□□□□ -0.22
MUC1-216	ENST00000467134	CDHR2	Q9BYE9	1310 aa		13.68	□□□□□ -0.22
MUC1-216	ENST00000467134	DZIP3	Q86Y13	1208 aa	Known RBP	13.68	□□□□□ -0.22
MUC1-216	ENST00000467134	PLA2G12B	Q9BX93	195 aa		13.68	□□□□□ -0.22
MUC1-216	ENST00000467134	ZBTB3	Q9H5J0	574 aa		13.68	□□□□□ -0.22
MUC1-216	ENST00000467134	PNMA6E	A0A0J9YXQ4	647 aa		13.67	□□□□□ -0.22
MUC1-216	ENST00000467134	PCCA	P05165	728 aa	Predicted RBP	13.67	□□□□□ -0.22
MUC1-216	ENST00000467134	CLEC4G	Q6UXB4	293 aa		13.67	□□□□□ -0.22
MUC1-216	ENST00000467134	PPP1R42	Q7Z4L9	355 aa		13.67	□□□□□ -0.22
MUC1-216	ENST00000467134	LINC00116	Q8NCU8	138 aa		13.67	□□□□□ -0.22
MUC1-216	ENST00000467134	KAZALD1	Q96I82	304 aa		13.67	□□□□□ -0.22
MUC1-216	ENST00000467134	SUCLG2	Q96I99	432 aa		13.67	□□□□□ -0.22
MUC1-216	ENST00000467134	AK7	Q96M32	723 aa		13.67	□□□□□ -0.22
MUC1-216	ENST00000467134	SRGAP3	O43295	1099 aa		13.66	□□□□□ -0.22
MUC1-216	ENST00000467134	RPS6KA4	O75676	772 aa		13.66	□□□□□ -0.22
MUC1-216	ENST00000467134	ADRA2B	P18089	450 aa		13.66	□□□□□ -0.22
MUC1-216	ENST00000467134	PARP10	Q53GL7	1025 aa		13.66	□□□□□ -0.22
MUC1-216	ENST00000467134	ANKRD45	Q5TZF3	282 aa		13.66	□□□□□ -0.22
MUC1-216	ENST00000467134	ZNF34	Q8IZ26	560 aa		13.66	□□□□□ -0.22
MUC1-216	ENST00000467134	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.66	□□□□□ -0.22
MUC1-216	ENST00000467134	CCNL1	Q9UK58	526 aa	Predicted RBP	13.66	□□□□□ -0.22
MUC1-216	ENST00000467134	ZNF652	Q9Y2D9	606 aa		13.66	□□□□□ -0.22
MUC1-216	ENST00000467134	QSER1	Q2KHR3	1735 aa		13.65	□□□□□ -0.22
MUC1-216	ENST00000467134	DDX60	Q8IY21	1712 aa	Known RBP	13.65	□□□□□ -0.22
MUC1-216	ENST00000467134	CAMTA2	O94983	1202 aa		13.65	□□□□□ -0.22
MUC1-216	ENST00000467134	HSP90B1	P14625	803 aa	Known RBP	13.65	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms