RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 SRGNP10124 158 aa25.16■■□□□ 1.62
SRSF4-202ENST00000466448 ERFEQ4G0M1 354 aa25.16■■□□□ 1.62
SRSF4-202ENST00000466448 STYK1Q6J9G0 422 aa25.16■■□□□ 1.62
SRSF4-202ENST00000466448 DPY19L2Q6NUT2 758 aa25.16■■□□□ 1.62
SRSF4-202ENST00000466448 BCORQ6W2J9 1755 aa25.16■■□□□ 1.62
SRSF4-202ENST00000466448 LTBP3Q9NS15 1303 aa25.15■■□□□ 1.62
SRSF4-202ENST00000466448 SNRPA1P09661 255 aaKnown RBP25.15■■□□□ 1.62
SRSF4-202ENST00000466448 PRPF40BQ6NWY9 871 aaKnown RBP25.15■■□□□ 1.62
SRSF4-202ENST00000466448 CNKSR1Q969H4 720 aa25.15■■□□□ 1.62
SRSF4-202ENST00000466448 DCTN1Q14203 1278 aa25.14■■□□□ 1.62
SRSF4-202ENST00000466448 TAOK3Q9H2K8 898 aa25.14■■□□□ 1.62
SRSF4-202ENST00000466448 CLEC4GQ6UXB4 293 aa25.13■■□□□ 1.61
SRSF4-202ENST00000466448 NBPF5PQ86XG9 351 aaPredicted RBP25.13■■□□□ 1.61
SRSF4-202ENST00000466448 MASTLQ96GX5 879 aa25.13■■□□□ 1.61
SRSF4-202ENST00000466448 FER1L6Q2WGJ9 1857 aa25.11■■□□□ 1.61
SRSF4-202ENST00000466448 NBPF26B4DH59 902 aa25.11■■□□□ 1.61
SRSF4-202ENST00000466448 NBPF10Q6P3W6 841 aaKnown RBP25.11■■□□□ 1.61
SRSF4-202ENST00000466448 NBPF15Q8N660 670 aa25.11■■□□□ 1.61
SRSF4-202ENST00000466448 ZNF652Q9Y2D9 606 aa25.11■■□□□ 1.61
SRSF4-202ENST00000466448 HTATSF1O43719 755 aaKnown RBP25.1■■□□□ 1.61
SRSF4-202ENST00000466448 CCDC88AQ3V6T2 1871 aa25.09■■□□□ 1.61
SRSF4-202ENST00000466448 SOGA3Q5TF21 947 aa25.09■■□□□ 1.61
SRSF4-202ENST00000466448 PCNTO95613 3336 aa25.09■■□□□ 1.61
SRSF4-202ENST00000466448 SLX4Q8IY92 1834 aa25.08■■□□□ 1.61
SRSF4-202ENST00000466448 COL13A1Q5TAT6 717 aaPredicted RBP25.08■■□□□ 1.61
SRSF4-202ENST00000466448 C7orf43Q8WVR3 580 aa25.08■■□□□ 1.61
SRSF4-202ENST00000466448 DDNO94850 711 aaPredicted RBP25.07■■□□□ 1.6
SRSF4-202ENST00000466448 NIP7Q9Y221 180 aaKnown RBP eCLIP25.07■■□□□ 1.6
SRSF4-202ENST00000466448 KLRG2A4D1S0 409 aaPredicted RBP25.06■■□□□ 1.6
SRSF4-202ENST00000466448 RGL2O15211 777 aa25.06■■□□□ 1.6
SRSF4-202ENST00000466448 NPR1P16066 1061 aa25.06■■□□□ 1.6
SRSF4-202ENST00000466448 MIS18AQ9NYP9 233 aa25.06■■□□□ 1.6
SRSF4-202ENST00000466448 TAF7Q15545 349 aaPredicted RBP25.05■■□□□ 1.6
SRSF4-202ENST00000466448 TPTE2Q6XPS3 522 aa25.05■■□□□ 1.6
SRSF4-202ENST00000466448 ARFGEF2Q9Y6D5 1785 aa25.05■■□□□ 1.6
SRSF4-202ENST00000466448 CCDC93Q567U6 631 aa25.04■■□□□ 1.6
SRSF4-202ENST00000466448 FAM177BA6PVY3 158 aa25.03■■□□□ 1.6
SRSF4-202ENST00000466448 POTEIP0CG38 1075 aa25.03■■□□□ 1.6
SRSF4-202ENST00000466448 POTEJP0CG39 1038 aa25.03■■□□□ 1.6
SRSF4-202ENST00000466448 HLFQ16534 295 aa25.03■■□□□ 1.6
SRSF4-202ENST00000466448 DICER1Q9UPY3 1922 aaKnown RBP25.03■■□□□ 1.6
SRSF4-202ENST00000466448 CHADLQ6NUI6 762 aa25.02■■□□□ 1.6
SRSF4-202ENST00000466448 CACNA1SQ13698 1873 aa25.01■■□□□ 1.59
SRSF4-202ENST00000466448 OLFM4Q6UX06 510 aa25.01■■□□□ 1.59
SRSF4-202ENST00000466448 FKBP4Q02790 459 aaKnown RBP eCLIP24.99■■□□□ 1.59
SRSF4-202ENST00000466448 IQCA1LA6NCM1 817 aa24.98■■□□□ 1.59
SRSF4-202ENST00000466448 HSPA1AP0DMV8 641 aaKnown RBP24.98■■□□□ 1.59
SRSF4-202ENST00000466448 HSPA1BP0DMV9 641 aaKnown RBP24.98■■□□□ 1.59
SRSF4-202ENST00000466448 L3MBTL3Q96JM7 780 aaPredicted RBP24.98■■□□□ 1.59
SRSF4-202ENST00000466448 ZNF277Q9NRM2 450 aaPredicted RBP24.98■■□□□ 1.59
SRSF4-202ENST00000466448 GTF2E1P29083 439 aaPredicted RBP24.97■■□□□ 1.59
SRSF4-202ENST00000466448 NGEFQ8N5V2 710 aa24.97■■□□□ 1.59
SRSF4-202ENST00000466448 PNISRQ8TF01 805 aaKnown RBP24.97■■□□□ 1.59
SRSF4-202ENST00000466448 CREBZFQ9NS37 354 aa24.97■■□□□ 1.59
SRSF4-202ENST00000466448 LAMB4A4D0S4 1761 aa24.97■■□□□ 1.59
SRSF4-202ENST00000466448 ZNF541Q9H0D2 1346 aa24.96■■□□□ 1.59
SRSF4-202ENST00000466448 NEFMP07197 916 aa24.96■■□□□ 1.59
SRSF4-202ENST00000466448 RTKN2Q8IZC4 609 aa24.96■■□□□ 1.59
SRSF4-202ENST00000466448 PLEKHF1Q96S99 279 aa24.96■■□□□ 1.59
SRSF4-202ENST00000466448 ABCC12Q96J65 1359 aa24.95■■□□□ 1.59
SRSF4-202ENST00000466448 ALDH1B1P30837 517 aa24.95■■□□□ 1.58
SRSF4-202ENST00000466448 TAF1DQ9H5J8 278 aaPredicted RBP24.95■■□□□ 1.58
SRSF4-202ENST00000466448 ERVV-1B6SEH8 477 aa24.94■■□□□ 1.58
SRSF4-202ENST00000466448 EIF4A1P60842 406 aaKnown RBP24.94■■□□□ 1.58
SRSF4-202ENST00000466448 CRY2Q49AN0 593 aa24.94■■□□□ 1.58
SRSF4-202ENST00000466448 LDHDQ86WU2 507 aa24.94■■□□□ 1.58
SRSF4-202ENST00000466448 NUTM1Q86Y26 1132 aa24.94■■□□□ 1.58
SRSF4-202ENST00000466448 TNS4Q8IZW8 715 aa24.94■■□□□ 1.58
SRSF4-202ENST00000466448 THUMPD2Q9BTF0 503 aaKnown RBP24.94■■□□□ 1.58
SRSF4-202ENST00000466448 KDM3BQ7LBC6 1761 aa24.93■■□□□ 1.58
SRSF4-202ENST00000466448 MAP3K15Q6ZN16 1313 aa24.93■■□□□ 1.58
SRSF4-202ENST00000466448 TTLL7Q6ZT98 887 aa24.93■■□□□ 1.58
SRSF4-202ENST00000466448 MKRN1Q9UHC7 482 aaKnown RBP24.93■■□□□ 1.58
SRSF4-202ENST00000466448 RRP7AQ9Y3A4 280 aaKnown RBP24.93■■□□□ 1.58
SRSF4-202ENST00000466448 PASKQ96RG2 1323 aa24.92■■□□□ 1.58
SRSF4-202ENST00000466448 NFE2L2Q16236 605 aa24.92■■□□□ 1.58
SRSF4-202ENST00000466448 NYXQ9GZU5 481 aa24.92■■□□□ 1.58
SRSF4-202ENST00000466448 SNED1Q8TER0 1413 aa24.92■■□□□ 1.58
SRSF4-202ENST00000466448 MYL6BP14649 208 aa24.91■■□□□ 1.58
SRSF4-202ENST00000466448 IARSP41252 1262 aaKnown RBP24.91■■□□□ 1.58
SRSF4-202ENST00000466448 KIF6Q6ZMV9 814 aa24.91■■□□□ 1.58
SRSF4-202ENST00000466448 SYNE4Q8N205 404 aa24.91■■□□□ 1.58
SRSF4-202ENST00000466448 ZBTB3Q9H5J0 574 aa24.9■■□□□ 1.58
SRSF4-202ENST00000466448 UBN2Q6ZU65 1347 aa24.89■■□□□ 1.58
SRSF4-202ENST00000466448 FZD9O00144 591 aa24.89■■□□□ 1.58
SRSF4-202ENST00000466448 CAPN15O75808 1086 aa24.89■■□□□ 1.58
SRSF4-202ENST00000466448 GPTP24298 496 aa24.89■■□□□ 1.58
SRSF4-202ENST00000466448 EAPPQ56P03 285 aaPredicted RBP24.89■■□□□ 1.58
SRSF4-202ENST00000466448 HACL1Q9UJ83 578 aa24.89■■□□□ 1.58
SRSF4-202ENST00000466448 SCN4AP35499 1836 aa24.89■■□□□ 1.57
SRSF4-202ENST00000466448 PSMD1Q99460 953 aa24.88■■□□□ 1.57
SRSF4-202ENST00000466448 IBTKQ9P2D0 1353 aaPredicted RBP24.88■■□□□ 1.57
SRSF4-202ENST00000466448 RNF123Q5XPI4 1314 aa24.87■■□□□ 1.57
SRSF4-202ENST00000466448 RIC1Q4ADV7 1423 aa24.87■■□□□ 1.57
SRSF4-202ENST00000466448 DLG5Q8TDM6 1919 aa24.87■■□□□ 1.57
SRSF4-202ENST00000466448 ITGBL1O95965 494 aaPredicted RBP24.87■■□□□ 1.57
SRSF4-202ENST00000466448 EPHX2P34913 555 aa24.87■■□□□ 1.57
SRSF4-202ENST00000466448 SUSD4Q5VX71 490 aa24.87■■□□□ 1.57
SRSF4-202ENST00000466448 CNTNAP1P78357 1384 aa24.87■■□□□ 1.57
SRSF4-202ENST00000466448 MAPK8IP3Q9UPT6 1336 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms