RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 NBPF5PQ86XG9 351 aaPredicted RBP20.42■□□□□ 0.86
CMSS1-202ENST00000463526 POTECB2RU33 542 aa20.41■□□□□ 0.86
CMSS1-202ENST00000463526 SRGNP10124 158 aa20.41■□□□□ 0.86
CMSS1-202ENST00000463526 STYK1Q6J9G0 422 aa20.41■□□□□ 0.86
CMSS1-202ENST00000463526 PRPF40BQ6NWY9 871 aaKnown RBP20.41■□□□□ 0.86
CMSS1-202ENST00000463526 MASTLQ96GX5 879 aa20.41■□□□□ 0.86
CMSS1-202ENST00000463526 TAOK3Q9H2K8 898 aa20.41■□□□□ 0.86
CMSS1-202ENST00000463526 MIS18AQ9NYP9 233 aa20.41■□□□□ 0.86
CMSS1-202ENST00000463526 SCN7AQ01118 1682 aa20.41■□□□□ 0.86
CMSS1-202ENST00000463526 ANKRD31Q8N7Z5 1873 aa20.41■□□□□ 0.86
CMSS1-202ENST00000463526 NBPF26B4DH59 902 aa20.39■□□□□ 0.85
CMSS1-202ENST00000463526 NBPF10Q6P3W6 841 aaKnown RBP20.39■□□□□ 0.85
CMSS1-202ENST00000463526 NBPF15Q8N660 670 aa20.39■□□□□ 0.85
CMSS1-202ENST00000463526 JMYQ8N9B5 988 aa20.39■□□□□ 0.85
CMSS1-202ENST00000463526 ZNF652Q9Y2D9 606 aa20.39■□□□□ 0.85
CMSS1-202ENST00000463526 CCDC88AQ3V6T2 1871 aa20.39■□□□□ 0.85
CMSS1-202ENST00000463526 CLEC4GQ6UXB4 293 aa20.38■□□□□ 0.85
CMSS1-202ENST00000463526 NIP7Q9Y221 180 aaKnown RBP eCLIP20.38■□□□□ 0.85
CMSS1-202ENST00000463526 COL11A2P13942 1736 aaPredicted RBP20.37■□□□□ 0.85
CMSS1-202ENST00000463526 DDNO94850 711 aaPredicted RBP20.37■□□□□ 0.85
CMSS1-202ENST00000463526 TAF7Q15545 349 aaPredicted RBP20.37■□□□□ 0.85
CMSS1-202ENST00000463526 NGEFQ8N5V2 710 aa20.37■□□□□ 0.85
CMSS1-202ENST00000463526 HTATSF1O43719 755 aaKnown RBP20.36■□□□□ 0.85
CMSS1-202ENST00000463526 TIAM2Q8IVF5 1701 aa20.36■□□□□ 0.85
CMSS1-202ENST00000463526 LTBP3Q9NS15 1303 aa20.35■□□□□ 0.85
CMSS1-202ENST00000463526 HLFQ16534 295 aa20.35■□□□□ 0.85
CMSS1-202ENST00000463526 COL13A1Q5TAT6 717 aaPredicted RBP20.35■□□□□ 0.85
CMSS1-202ENST00000463526 SOGA3Q5TF21 947 aa20.35■□□□□ 0.85
CMSS1-202ENST00000463526 TPTE2Q6XPS3 522 aa20.35■□□□□ 0.85
CMSS1-202ENST00000463526 SLX4Q8IY92 1834 aa20.34■□□□□ 0.85
CMSS1-202ENST00000463526 NEFMP07197 916 aa20.34■□□□□ 0.85
CMSS1-202ENST00000463526 NPR1P16066 1061 aa20.34■□□□□ 0.85
CMSS1-202ENST00000463526 OLFM4Q6UX06 510 aa20.34■□□□□ 0.85
CMSS1-202ENST00000463526 POTEIP0CG38 1075 aa20.33■□□□□ 0.85
CMSS1-202ENST00000463526 POTEJP0CG39 1038 aa20.33■□□□□ 0.85
CMSS1-202ENST00000463526 GTF2E1P29083 439 aaPredicted RBP20.33■□□□□ 0.85
CMSS1-202ENST00000463526 CCDC93Q567U6 631 aa20.33■□□□□ 0.85
CMSS1-202ENST00000463526 C7orf43Q8WVR3 580 aa20.32■□□□□ 0.84
CMSS1-202ENST00000463526 FER1L6Q2WGJ9 1857 aa20.31■□□□□ 0.84
CMSS1-202ENST00000463526 CHADLQ6NUI6 762 aa20.31■□□□□ 0.84
CMSS1-202ENST00000463526 THUMPD2Q9BTF0 503 aaKnown RBP20.31■□□□□ 0.84
CMSS1-202ENST00000463526 ZNF277Q9NRM2 450 aaPredicted RBP20.31■□□□□ 0.84
CMSS1-202ENST00000463526 RRP7AQ9Y3A4 280 aaKnown RBP20.31■□□□□ 0.84
CMSS1-202ENST00000463526 BCORQ6W2J9 1755 aa20.31■□□□□ 0.84
CMSS1-202ENST00000463526 KLRG2A4D1S0 409 aaPredicted RBP20.29■□□□□ 0.84
CMSS1-202ENST00000463526 FKBP4Q02790 459 aaKnown RBP eCLIP20.29■□□□□ 0.84
CMSS1-202ENST00000463526 CACNA1SQ13698 1873 aa20.28■□□□□ 0.84
CMSS1-202ENST00000463526 CAPN15O75808 1086 aa20.28■□□□□ 0.84
CMSS1-202ENST00000463526 HSPA1AP0DMV8 641 aaKnown RBP20.28■□□□□ 0.84
CMSS1-202ENST00000463526 HSPA1BP0DMV9 641 aaKnown RBP20.28■□□□□ 0.84
CMSS1-202ENST00000463526 MYL6BP14649 208 aa20.28■□□□□ 0.84
CMSS1-202ENST00000463526 NUTM1Q86Y26 1132 aa20.28■□□□□ 0.84
CMSS1-202ENST00000463526 PNISRQ8TF01 805 aaKnown RBP20.28■□□□□ 0.84
CMSS1-202ENST00000463526 TTLL7Q6ZT98 887 aa20.27■□□□□ 0.84
CMSS1-202ENST00000463526 MKRN1Q9UHC7 482 aaKnown RBP20.27■□□□□ 0.84
CMSS1-202ENST00000463526 DICER1Q9UPY3 1922 aaKnown RBP20.26■□□□□ 0.83
CMSS1-202ENST00000463526 IQCA1LA6NCM1 817 aa20.26■□□□□ 0.83
CMSS1-202ENST00000463526 RGL2O15211 777 aa20.26■□□□□ 0.83
CMSS1-202ENST00000463526 GPTP24298 496 aa20.26■□□□□ 0.83
CMSS1-202ENST00000463526 ALDH1B1P30837 517 aa20.26■□□□□ 0.83
CMSS1-202ENST00000463526 EIF4A1P60842 406 aaKnown RBP20.26■□□□□ 0.83
CMSS1-202ENST00000463526 EAPPQ56P03 285 aaPredicted RBP20.26■□□□□ 0.83
CMSS1-202ENST00000463526 RTKN2Q8IZC4 609 aa20.26■□□□□ 0.83
CMSS1-202ENST00000463526 TNS4Q8IZW8 715 aa20.26■□□□□ 0.83
CMSS1-202ENST00000463526 SYNE4Q8N205 404 aa20.26■□□□□ 0.83
CMSS1-202ENST00000463526 ZNF541Q9H0D2 1346 aa20.26■□□□□ 0.83
CMSS1-202ENST00000463526 NFE2L2Q16236 605 aa20.25■□□□□ 0.83
CMSS1-202ENST00000463526 KIF6Q6ZMV9 814 aa20.25■□□□□ 0.83
CMSS1-202ENST00000463526 PLEKHF1Q96S99 279 aa20.25■□□□□ 0.83
CMSS1-202ENST00000463526 ZBTB3Q9H5J0 574 aa20.25■□□□□ 0.83
CMSS1-202ENST00000463526 TAF1DQ9H5J8 278 aaPredicted RBP20.25■□□□□ 0.83
CMSS1-202ENST00000463526 NYXQ9GZU5 481 aa20.24■□□□□ 0.83
CMSS1-202ENST00000463526 CLEC11AQ9Y240 323 aa20.24■□□□□ 0.83
CMSS1-202ENST00000463526 MAP3K15Q6ZN16 1313 aa20.24■□□□□ 0.83
CMSS1-202ENST00000463526 ABCC12Q96J65 1359 aa20.23■□□□□ 0.83
CMSS1-202ENST00000463526 ERVV-1B6SEH8 477 aa20.23■□□□□ 0.83
CMSS1-202ENST00000463526 IARSP41252 1262 aaKnown RBP20.23■□□□□ 0.83
CMSS1-202ENST00000463526 LDHDQ86WU2 507 aa20.23■□□□□ 0.83
CMSS1-202ENST00000463526 L3MBTL3Q96JM7 780 aaPredicted RBP20.23■□□□□ 0.83
CMSS1-202ENST00000463526 CREBZFQ9NS37 354 aa20.23■□□□□ 0.83
CMSS1-202ENST00000463526 MAPK8IP3Q9UPT6 1336 aa20.23■□□□□ 0.83
CMSS1-202ENST00000463526 TCERG1O14776 1098 aaKnown RBP20.22■□□□□ 0.83
CMSS1-202ENST00000463526 RPGRQ92834 1020 aaKnown RBP20.22■□□□□ 0.83
CMSS1-202ENST00000463526 HACL1Q9UJ83 578 aa20.22■□□□□ 0.83
CMSS1-202ENST00000463526 SUSD4Q5VX71 490 aa20.21■□□□□ 0.83
CMSS1-202ENST00000463526 ARFGEF2Q9Y6D5 1785 aa20.21■□□□□ 0.83
CMSS1-202ENST00000463526 PCNTO95613 3336 aa20.2■□□□□ 0.82
CMSS1-202ENST00000463526 EIF2S2P20042 333 aaKnown RBP20.2■□□□□ 0.82
CMSS1-202ENST00000463526 PNNQ9H307 717 aaKnown RBP20.2■□□□□ 0.82
CMSS1-202ENST00000463526 RNF123Q5XPI4 1314 aa20.2■□□□□ 0.82
CMSS1-202ENST00000463526 UBN2Q6ZU65 1347 aa20.2■□□□□ 0.82
CMSS1-202ENST00000463526 EPHX2P34913 555 aa20.19■□□□□ 0.82
CMSS1-202ENST00000463526 CRY2Q49AN0 593 aa20.19■□□□□ 0.82
CMSS1-202ENST00000463526 JDP2Q8WYK2 163 aa20.19■□□□□ 0.82
CMSS1-202ENST00000463526 TSPYL4Q9UJ04 414 aa20.19■□□□□ 0.82
CMSS1-202ENST00000463526 FZD9O00144 591 aa20.18■□□□□ 0.82
CMSS1-202ENST00000463526 SLC51AQ86UW1 340 aa20.18■□□□□ 0.82
CMSS1-202ENST00000463526 GJA3Q9Y6H8 435 aa20.18■□□□□ 0.82
CMSS1-202ENST00000463526 PASKQ96RG2 1323 aa20.18■□□□□ 0.82
CMSS1-202ENST00000463526 RIPK4P57078 832 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms