RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 NRXN2Q9P2S2 1712 aa22.96■■□□□ 1.27
VPS52-214ENST00000463486 HDGFL1Q5TGJ6 251 aa22.96■■□□□ 1.27
VPS52-214ENST00000463486 NPM2Q86SE8 214 aaKnown RBP22.96■■□□□ 1.27
VPS52-214ENST00000463486 CHPF2Q9P2E5 772 aa22.96■■□□□ 1.27
VPS52-214ENST00000463486 ERVV-1B6SEH8 477 aa22.95■■□□□ 1.26
VPS52-214ENST00000463486 SERPINB2P05120 415 aa22.95■■□□□ 1.26
VPS52-214ENST00000463486 MAP3K15Q6ZN16 1313 aa22.95■■□□□ 1.26
VPS52-214ENST00000463486 KIAA1551Q9HCM1 1747 aa22.95■■□□□ 1.26
VPS52-214ENST00000463486 FANCIQ9NVI1 1328 aa22.95■■□□□ 1.26
VPS52-214ENST00000463486 AFDNP55196 1824 aaKnown RBP22.94■■□□□ 1.26
VPS52-214ENST00000463486 BICDL1Q6ZP65 573 aa22.94■■□□□ 1.26
VPS52-214ENST00000463486 PXDNLA1KZ92 1463 aa22.92■■□□□ 1.26
VPS52-214ENST00000463486 COPS6Q7L5N1 327 aa22.92■■□□□ 1.26
VPS52-214ENST00000463486 DBF4Q9UBU7 674 aaPredicted RBP22.92■■□□□ 1.26
VPS52-214ENST00000463486 TGFB2P61812 414 aa22.91■■□□□ 1.26
VPS52-214ENST00000463486 XAGE3Q8WTP9 111 aa22.91■■□□□ 1.26
VPS52-214ENST00000463486 SETDB2Q96T68 719 aa22.91■■□□□ 1.26
VPS52-214ENST00000463486 CARMIL3Q8ND23 1372 aa22.9■■□□□ 1.26
VPS52-214ENST00000463486 KCNA3P22001 575 aa22.9■■□□□ 1.26
VPS52-214ENST00000463486 ZBTB3Q9H5J0 574 aa22.9■■□□□ 1.26
VPS52-214ENST00000463486 ZNF652Q9Y2D9 606 aa22.9■■□□□ 1.26
VPS52-214ENST00000463486 PRR5LQ6MZQ0 368 aa22.89■■□□□ 1.25
VPS52-214ENST00000463486 GIGYF2Q6Y7W6 1299 aaKnown RBP22.89■■□□□ 1.25
VPS52-214ENST00000463486 KIF6Q6ZMV9 814 aa22.89■■□□□ 1.25
VPS52-214ENST00000463486 NUP98P52948 1817 aa22.89■■□□□ 1.25
VPS52-214ENST00000463486 A0A0G2JLW4 131 aa22.88■■□□□ 1.25
VPS52-214ENST00000463486 EXOSC9Q06265 439 aaKnown RBP22.88■■□□□ 1.25
VPS52-214ENST00000463486 TWISTNBQ3B726 338 aaPredicted RBP22.88■■□□□ 1.25
VPS52-214ENST00000463486 ZNF34Q8IZ26 560 aa22.88■■□□□ 1.25
VPS52-214ENST00000463486 HYPKQ9NX55 129 aa22.88■■□□□ 1.25
VPS52-214ENST00000463486 ATP10DQ9P241 1426 aa22.88■■□□□ 1.25
VPS52-214ENST00000463486 VAMP4O75379 141 aa22.87■■□□□ 1.25
VPS52-214ENST00000463486 DPEP1P16444 411 aa22.87■■□□□ 1.25
VPS52-214ENST00000463486 YBX3P16989 372 aaKnown RBP eCLIP22.87■■□□□ 1.257e-11■■□□□ 13.3
VPS52-214ENST00000463486 GOLGA2Q08379 1002 aa22.87■■□□□ 1.25
VPS52-214ENST00000463486 NIP7Q9Y221 180 aaKnown RBP eCLIP22.87■■□□□ 1.25
VPS52-214ENST00000463486 AIMP1Q12904 312 aaKnown RBP22.86■■□□□ 1.25
VPS52-214ENST00000463486 MYH16Q9H6N6 1097 aa22.86■■□□□ 1.25
VPS52-214ENST00000463486 UBN2Q6ZU65 1347 aa22.85■■□□□ 1.25
VPS52-214ENST00000463486 CCDC30Q5VVM6 783 aa22.85■■□□□ 1.25
VPS52-214ENST00000463486 CCDC24Q8N4L8 307 aa22.85■■□□□ 1.25
VPS52-214ENST00000463486 PHAXQ9H814 394 aaKnown RBP22.85■■□□□ 1.25
VPS52-214ENST00000463486 N4BP2Q86UW6 1770 aaPredicted RBP22.85■■□□□ 1.25
VPS52-214ENST00000463486 SLFN5Q08AF3 891 aa22.84■■□□□ 1.25
VPS52-214ENST00000463486 TRMT2AQ8IZ69 625 aaKnown RBP22.84■■□□□ 1.25
VPS52-214ENST00000463486 ANKRD31Q8N7Z5 1873 aa22.83■■□□□ 1.25
VPS52-214ENST00000463486 CHRNA5P30532 468 aa22.83■■□□□ 1.25
VPS52-214ENST00000463486 ANKRD13DQ6ZTN6 518 aa22.83■■□□□ 1.25
VPS52-214ENST00000463486 CDCA7LQ96GN5 454 aa22.83■■□□□ 1.25
VPS52-214ENST00000463486 BRIP1Q9BX63 1249 aa22.83■■□□□ 1.25
VPS52-214ENST00000463486 NBPF5PQ86XG9 351 aaPredicted RBP22.82■■□□□ 1.24
VPS52-214ENST00000463486 CNBD1Q8NA66 436 aa22.82■■□□□ 1.24
VPS52-214ENST00000463486 PLBD2Q8NHP8 589 aa22.82■■□□□ 1.24
VPS52-214ENST00000463486 CHMP4AQ9BY43 222 aa22.82■■□□□ 1.24
VPS52-214ENST00000463486 BRCA1P38398 1863 aaKnown RBP22.81■■□□□ 1.24
VPS52-214ENST00000463486 TCERG1O14776 1098 aaKnown RBP22.81■■□□□ 1.24
VPS52-214ENST00000463486 GPTP24298 496 aa22.81■■□□□ 1.24
VPS52-214ENST00000463486 TCIRG1Q13488 830 aa22.81■■□□□ 1.24
VPS52-214ENST00000463486 GPR162Q16538 588 aa22.81■■□□□ 1.24
VPS52-214ENST00000463486 SUSD4Q5VX71 490 aa22.81■■□□□ 1.24
VPS52-214ENST00000463486 KLRG2A4D1S0 409 aaPredicted RBP22.8■■□□□ 1.24
VPS52-214ENST00000463486 E9PSI1 815 aa22.8■■□□□ 1.24
VPS52-214ENST00000463486 TPTE2Q6XPS3 522 aa22.8■■□□□ 1.24
VPS52-214ENST00000463486 WWC3Q9ULE0 1092 aa22.8■■□□□ 1.24
VPS52-214ENST00000463486 IBTKQ9P2D0 1353 aaPredicted RBP22.79■■□□□ 1.24
VPS52-214ENST00000463486 G2E3Q7L622 706 aa22.79■■□□□ 1.24
VPS52-214ENST00000463486 FAM177BA6PVY3 158 aa22.78■■□□□ 1.24
VPS52-214ENST00000463486 NTSR2O95665 410 aa22.78■■□□□ 1.24
VPS52-214ENST00000463486 NLRP10Q86W26 655 aa22.78■■□□□ 1.24
VPS52-214ENST00000463486 ISCA1Q9BUE6 129 aa22.78■■□□□ 1.24
VPS52-214ENST00000463486 DCAF8L1A6NGE4 600 aa22.77■■□□□ 1.24
VPS52-214ENST00000463486 SLC4A2P04920 1241 aa22.77■■□□□ 1.24
VPS52-214ENST00000463486 PELP1Q8IZL8 1130 aaKnown RBP22.77■■□□□ 1.24
VPS52-214ENST00000463486 PIM2Q9P1W9 311 aa22.77■■□□□ 1.24
VPS52-214ENST00000463486 ABCC12Q96J65 1359 aa22.76■■□□□ 1.23
VPS52-214ENST00000463486 PDE6BP35913 854 aa22.76■■□□□ 1.23
VPS52-214ENST00000463486 ST5P78524 1137 aa22.76■■□□□ 1.23
VPS52-214ENST00000463486 ERFEQ4G0M1 354 aa22.76■■□□□ 1.23
VPS52-214ENST00000463486 PARP10Q53GL7 1025 aa22.76■■□□□ 1.23
VPS52-214ENST00000463486 HSP90AB3PQ58FF7 597 aa22.76■■□□□ 1.23
VPS52-214ENST00000463486 NUTM1Q86Y26 1132 aa22.76■■□□□ 1.23
VPS52-214ENST00000463486 C2CD5Q86YS7 1000 aa22.76■■□□□ 1.23
VPS52-214ENST00000463486 ANKRD36CQ5JPF3 1778 aa22.76■■□□□ 1.23
VPS52-214ENST00000463486 TRIM28Q13263 835 aaKnown RBP22.75■■□□□ 1.23
VPS52-214ENST00000463486 STK31Q9BXU1 1019 aa22.75■■□□□ 1.23
VPS52-214ENST00000463486 NYXQ9GZU5 481 aa22.75■■□□□ 1.23
VPS52-214ENST00000463486 DLEC1Q9Y238 1755 aa22.75■■□□□ 1.23
VPS52-214ENST00000463486 COL11A2P13942 1736 aaPredicted RBP22.74■■□□□ 1.23
VPS52-214ENST00000463486 ARFGEF2Q9Y6D5 1785 aa22.74■■□□□ 1.23
VPS52-214ENST00000463486 H0YIN7 160 aa22.74■■□□□ 1.23
VPS52-214ENST00000463486 GRIN3BO60391 1043 aa22.74■■□□□ 1.23
VPS52-214ENST00000463486 SRGNP10124 158 aa22.74■■□□□ 1.23
VPS52-214ENST00000463486 ADCY9O60503 1353 aa22.74■■□□□ 1.23
VPS52-214ENST00000463486 RIC1Q4ADV7 1423 aa22.74■■□□□ 1.23
VPS52-214ENST00000463486 SLC10A5Q5PT55 438 aa22.73■■□□□ 1.23
VPS52-214ENST00000463486 KSR2Q6VAB6 950 aa22.73■■□□□ 1.23
VPS52-214ENST00000463486 PDZRN3Q9UPQ7 1066 aa22.73■■□□□ 1.23
VPS52-214ENST00000463486 BCS1LQ9Y276 419 aa22.73■■□□□ 1.23
VPS52-214ENST00000463486 ATP5J2-PTCD1G3V325 749 aa22.72■■□□□ 1.23
VPS52-214ENST00000463486 DALRD3Q5D0E6 543 aaKnown RBP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms