RNA–Protein interactions for RNA: ENST00000463343.1

SF1-212, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 983 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-212ENST00000463343 DNAJC5GQ8N7S2 189 aa23.03■■□□□ 1.28
SF1-212ENST00000463343 NMRK2Q9NPI5 230 aa23.03■■□□□ 1.28
SF1-212ENST00000463343 USPL1Q5W0Q7 1092 aa23.02■■□□□ 1.28
SF1-212ENST00000463343 IL16Q14005 1332 aa23.02■■□□□ 1.28
SF1-212ENST00000463343 KDM2BQ8NHM5 1336 aa23.02■■□□□ 1.28
SF1-212ENST00000463343 COL15A1P39059 1388 aa23.01■■□□□ 1.27
SF1-212ENST00000463343 A0A087WZG4 1122 aa23.01■■□□□ 1.27
SF1-212ENST00000463343 EIF2S2P20042 333 aaKnown RBP23■■□□□ 1.27
SF1-212ENST00000463343 CHRNA5P30532 468 aa23■■□□□ 1.27
SF1-212ENST00000463343 FSTL1Q12841 308 aa23■■□□□ 1.27
SF1-212ENST00000463343 ZNF330Q9Y3S2 320 aaPredicted RBP23■■□□□ 1.27
SF1-212ENST00000463343 ZC3H4Q9UPT8 1303 aaKnown RBP23■■□□□ 1.27
SF1-212ENST00000463343 SBF1O95248 1867 aa23■■□□□ 1.27
SF1-212ENST00000463343 NFIXQ14938 502 aa22.99■■□□□ 1.27
SF1-212ENST00000463343 TBC1D2BQ9UPU7 963 aa22.99■■□□□ 1.27
SF1-212ENST00000463343 DUSP27Q5VZP5 1158 aa22.98■■□□□ 1.27
SF1-212ENST00000463343 C8orf58Q8NAV2 365 aa22.98■■□□□ 1.27
SF1-212ENST00000463343 TSR2Q969E8 191 aaKnown RBP22.98■■□□□ 1.27
SF1-212ENST00000463343 BCL2L12Q9HB09 334 aa22.98■■□□□ 1.27
SF1-212ENST00000463343 RNF181Q9P0P0 153 aa22.98■■□□□ 1.27
SF1-212ENST00000463343 NRXN2Q9P2S2 1712 aa22.97■■□□□ 1.27
SF1-212ENST00000463343 PDIA6Q15084 440 aa22.97■■□□□ 1.27
SF1-212ENST00000463343 C16orf71Q8IYS4 520 aaPredicted RBP22.97■■□□□ 1.27
SF1-212ENST00000463343 SPINK5Q9NQ38 1064 aaPredicted RBP22.97■■□□□ 1.27
SF1-212ENST00000463343 ELL2O00472 640 aaPredicted RBP22.96■■□□□ 1.27
SF1-212ENST00000463343 HOXB7P09629 217 aa22.96■■□□□ 1.27
SF1-212ENST00000463343 NPM2Q86SE8 214 aaKnown RBP22.96■■□□□ 1.27
SF1-212ENST00000463343 NECTIN2Q92692 538 aa22.96■■□□□ 1.27
SF1-212ENST00000463343 ZNF521Q96K83 1311 aa22.96■■□□□ 1.27
SF1-212ENST00000463343 AFDNP55196 1824 aaKnown RBP22.96■■□□□ 1.27
SF1-212ENST00000463343 SERPINB2P05120 415 aa22.95■■□□□ 1.26
SF1-212ENST00000463343 ERBB4Q15303 1308 aa22.95■■□□□ 1.26
SF1-212ENST00000463343 DZIP3Q86Y13 1208 aaKnown RBP22.95■■□□□ 1.26
SF1-212ENST00000463343 MYL6BP14649 208 aa22.94■■□□□ 1.26
SF1-212ENST00000463343 CAMTA2O94983 1202 aa22.93■■□□□ 1.26
SF1-212ENST00000463343 PROSER3Q2NL68 480 aa22.93■■□□□ 1.26
SF1-212ENST00000463343 LRP10Q7Z4F1 713 aa22.93■■□□□ 1.26
SF1-212ENST00000463343 TSPYL6Q8N831 410 aa22.93■■□□□ 1.26
SF1-212ENST00000463343 PDZRN3Q9UPQ7 1066 aa22.93■■□□□ 1.26
SF1-212ENST00000463343 LAMB4A4D0S4 1761 aa22.93■■□□□ 1.26
SF1-212ENST00000463343 ANXA1P04083 346 aa22.92■■□□□ 1.26
SF1-212ENST00000463343 HDGFL1Q5TGJ6 251 aa22.92■■□□□ 1.26
SF1-212ENST00000463343 TTLL6Q8N841 843 aa22.92■■□□□ 1.26
SF1-212ENST00000463343 FANCIQ9NVI1 1328 aa22.91■■□□□ 1.26
SF1-212ENST00000463343 LMNB1P20700 586 aa22.91■■□□□ 1.26
SF1-212ENST00000463343 RRAGCQ9HB90 399 aa22.91■■□□□ 1.26
SF1-212ENST00000463343 TNRC6CQ9HCJ0 1690 aaKnown RBP22.9■■□□□ 1.26
SF1-212ENST00000463343 H0YIN7 160 aa22.9■■□□□ 1.26
SF1-212ENST00000463343 TTLL7Q6ZT98 887 aa22.9■■□□□ 1.26
SF1-212ENST00000463343 DDX21Q9NR30 783 aaKnown RBP eCLIP22.9■■□□□ 1.26
SF1-212ENST00000463343 DLEC1Q9Y238 1755 aa22.9■■□□□ 1.26
SF1-212ENST00000463343 GOLGA2Q08379 1002 aa22.89■■□□□ 1.25
SF1-212ENST00000463343 CHPF2Q9P2E5 772 aa22.89■■□□□ 1.25
SF1-212ENST00000463343 WDR90Q96KV7 1748 aa22.88■■□□□ 1.25
SF1-212ENST00000463343 TBC1D9BQ66K14 1250 aa22.88■■□□□ 1.25
SF1-212ENST00000463343 JMYQ8N9B5 988 aa22.88■■□□□ 1.25
SF1-212ENST00000463343 MYH16Q9H6N6 1097 aa22.88■■□□□ 1.25
SF1-212ENST00000463343 GLTPD2A6NH11 291 aa22.87■■□□□ 1.25
SF1-212ENST00000463343 EXOSC9Q06265 439 aaKnown RBP22.87■■□□□ 1.25
SF1-212ENST00000463343 HLFQ16534 295 aa22.87■■□□□ 1.25
SF1-212ENST00000463343 CLEC4GQ6UXB4 293 aa22.87■■□□□ 1.25
SF1-212ENST00000463343 BICDL1Q6ZP65 573 aa22.87■■□□□ 1.25
SF1-212ENST00000463343 C2CD5Q86YS7 1000 aa22.87■■□□□ 1.25
SF1-212ENST00000463343 SMC1BQ8NDV3 1235 aa22.87■■□□□ 1.25
SF1-212ENST00000463343 KLRG1Q96E93 195 aa22.87■■□□□ 1.25
SF1-212ENST00000463343 DBF4Q9UBU7 674 aaPredicted RBP22.87■■□□□ 1.25
SF1-212ENST00000463343 VEGFAP15692 232 aaPredicted RBP22.86■■□□□ 1.25
SF1-212ENST00000463343 TWISTNBQ3B726 338 aaPredicted RBP22.86■■□□□ 1.25
SF1-212ENST00000463343 COPS6Q7L5N1 327 aa22.86■■□□□ 1.25
SF1-212ENST00000463343 BRIP1Q9BX63 1249 aa22.86■■□□□ 1.25
SF1-212ENST00000463343 ERVV-1B6SEH8 477 aa22.85■■□□□ 1.25
SF1-212ENST00000463343 RGL2O15211 777 aa22.85■■□□□ 1.25
SF1-212ENST00000463343 XAGE3Q8WTP9 111 aa22.85■■□□□ 1.25
SF1-212ENST00000463343 MAP3K15Q6ZN16 1313 aa22.84■■□□□ 1.25
SF1-212ENST00000463343 PDE6BP35913 854 aa22.84■■□□□ 1.25
SF1-212ENST00000463343 RASSF7Q02833 373 aa22.84■■□□□ 1.25
SF1-212ENST00000463343 SLFN5Q08AF3 891 aa22.84■■□□□ 1.25
SF1-212ENST00000463343 KIF6Q6ZMV9 814 aa22.84■■□□□ 1.25
SF1-212ENST00000463343 CDCA7LQ96GN5 454 aa22.84■■□□□ 1.25
SF1-212ENST00000463343 VAMP4O75379 141 aa22.83■■□□□ 1.25
SF1-212ENST00000463343 PRELPP51888 382 aa22.83■■□□□ 1.25
SF1-212ENST00000463343 AIMP1Q12904 312 aaKnown RBP22.83■■□□□ 1.25
SF1-212ENST00000463343 CCDC30Q5VVM6 783 aa22.83■■□□□ 1.25
SF1-212ENST00000463343 CHMP4AQ9BY43 222 aa22.83■■□□□ 1.25
SF1-212ENST00000463343 ZBTB3Q9H5J0 574 aa22.83■■□□□ 1.25
SF1-212ENST00000463343 HYPKQ9NX55 129 aa22.83■■□□□ 1.25
SF1-212ENST00000463343 ZNF652Q9Y2D9 606 aa22.83■■□□□ 1.25
SF1-212ENST00000463343 E9PSI1 815 aa22.82■■□□□ 1.24
SF1-212ENST00000463343 NFKBIEO00221 500 aa22.82■■□□□ 1.24
SF1-212ENST00000463343 SETDB2Q96T68 719 aa22.82■■□□□ 1.24
SF1-212ENST00000463343 CCDC88AQ3V6T2 1871 aa22.81■■□□□ 1.24
SF1-212ENST00000463343 CARMIL3Q8ND23 1372 aa22.81■■□□□ 1.24
SF1-212ENST00000463343 TCERG1O14776 1098 aaKnown RBP22.81■■□□□ 1.24
SF1-212ENST00000463343 PRR5LQ6MZQ0 368 aa22.8■■□□□ 1.24
SF1-212ENST00000463343 DPY19L2Q6NUT2 758 aa22.8■■□□□ 1.24
SF1-212ENST00000463343 TRMT2AQ8IZ69 625 aaKnown RBP22.8■■□□□ 1.24
SF1-212ENST00000463343 PHAXQ9H814 394 aaKnown RBP22.8■■□□□ 1.24
SF1-212ENST00000463343 SCN7AQ01118 1682 aa22.8■■□□□ 1.24
SF1-212ENST00000463343 HNRNPUQ00839 825 aaKnown RBP eCLIP22.79■■□□□ 1.24
SF1-212ENST00000463343 GIGYF2Q6Y7W6 1299 aaKnown RBP22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms