RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 CNKSR1Q969H4 720 aa27.83■■■□□ 2.05
CPSF7-209ENST00000463244 TAOK3Q9H2K8 898 aa27.83■■■□□ 2.05
CPSF7-209ENST00000463244 NPHP1O15259 732 aa27.82■■■□□ 2.04
CPSF7-209ENST00000463244 SRGNP10124 158 aa27.82■■■□□ 2.04
CPSF7-209ENST00000463244 STYK1Q6J9G0 422 aa27.82■■■□□ 2.04
CPSF7-209ENST00000463244 DZIP3Q86Y13 1208 aaKnown RBP27.82■■■□□ 2.04
CPSF7-209ENST00000463244 PRPF40BQ6NWY9 871 aaKnown RBP27.81■■■□□ 2.04
CPSF7-209ENST00000463244 USP16Q9Y5T5 823 aa27.81■■■□□ 2.04
CPSF7-209ENST00000463244 MASTLQ96GX5 879 aa27.8■■■□□ 2.04
CPSF7-209ENST00000463244 CFAP53Q96M91 514 aa27.79■■■□□ 2.04
CPSF7-209ENST00000463244 PIP4K2AP48426 406 aaPredicted RBP27.78■■■□□ 2.04
CPSF7-209ENST00000463244 SOGA3Q5TF21 947 aa27.78■■■□□ 2.04
CPSF7-209ENST00000463244 CLEC4GQ6UXB4 293 aa27.78■■■□□ 2.04
CPSF7-209ENST00000463244 PRAMEF22A3QJZ6 481 aa27.77■■■□□ 2.04
CPSF7-209ENST00000463244 DDNO94850 711 aaPredicted RBP27.75■■■□□ 2.03
CPSF7-209ENST00000463244 SNRPA1P09661 255 aaKnown RBP27.75■■■□□ 2.03
CPSF7-209ENST00000463244 NBPF5PQ86XG9 351 aaPredicted RBP27.75■■■□□ 2.03
CPSF7-209ENST00000463244 NUDCQ9Y266 331 aa27.75■■■□□ 2.03
CPSF7-209ENST00000463244 HSPA1AP0DMV8 641 aaKnown RBP27.74■■■□□ 2.03
CPSF7-209ENST00000463244 HSPA1BP0DMV9 641 aaKnown RBP27.74■■■□□ 2.03
CPSF7-209ENST00000463244 MCM10Q7L590 875 aa27.74■■■□□ 2.03
CPSF7-209ENST00000463244 ZNF652Q9Y2D9 606 aa27.74■■■□□ 2.03
CPSF7-209ENST00000463244 CHADLQ6NUI6 762 aa27.73■■■□□ 2.03
CPSF7-209ENST00000463244 TNS4Q8IZW8 715 aa27.73■■■□□ 2.03
CPSF7-209ENST00000463244 C7orf43Q8WVR3 580 aa27.73■■■□□ 2.03
CPSF7-209ENST00000463244 RTF1Q92541 710 aaKnown RBP27.73■■■□□ 2.03
CPSF7-209ENST00000463244 KLRG2A4D1S0 409 aaPredicted RBP27.71■■■□□ 2.03
CPSF7-209ENST00000463244 POTEIP0CG38 1075 aa27.71■■■□□ 2.03
CPSF7-209ENST00000463244 POTEJP0CG39 1038 aa27.71■■■□□ 2.03
CPSF7-209ENST00000463244 U2AF1L5P0DN76 240 aaPredicted RBP27.71■■■□□ 2.03
CPSF7-209ENST00000463244 U2AF1Q01081 240 aaKnown RBP eCLIP27.71■■■□□ 2.03
CPSF7-209ENST00000463244 SCN4AP35499 1836 aa27.71■■■□□ 2.03
CPSF7-209ENST00000463244 RGL2O15211 777 aa27.7■■■□□ 2.02
CPSF7-209ENST00000463244 NPR1P16066 1061 aa27.7■■■□□ 2.02
CPSF7-209ENST00000463244 CCDC93Q567U6 631 aa27.7■■■□□ 2.02
CPSF7-209ENST00000463244 CREBZFQ9NS37 354 aa27.7■■■□□ 2.02
CPSF7-209ENST00000463244 NBPF26B4DH59 902 aa27.69■■■□□ 2.02
CPSF7-209ENST00000463244 NBPF10Q6P3W6 841 aaKnown RBP27.69■■■□□ 2.02
CPSF7-209ENST00000463244 NBPF15Q8N660 670 aa27.69■■■□□ 2.02
CPSF7-209ENST00000463244 PPP2R1AP30153 589 aa27.68■■■□□ 2.02
CPSF7-209ENST00000463244 DCTN1Q14203 1278 aa27.68■■■□□ 2.02
CPSF7-209ENST00000463244 TPTE2Q6XPS3 522 aa27.68■■■□□ 2.02
CPSF7-209ENST00000463244 L3MBTL3Q96JM7 780 aaPredicted RBP27.68■■■□□ 2.02
CPSF7-209ENST00000463244 NIP7Q9Y221 180 aaKnown RBP eCLIP27.68■■■□□ 2.02
CPSF7-209ENST00000463244 IQCA1LA6NCM1 817 aa27.67■■■□□ 2.02
CPSF7-209ENST00000463244 HTATSF1O43719 755 aaKnown RBP27.67■■■□□ 2.02
CPSF7-209ENST00000463244 CAPN15O75808 1086 aa27.66■■■□□ 2.02
CPSF7-209ENST00000463244 LAMB4A4D0S4 1761 aa27.65■■■□□ 2.02
CPSF7-209ENST00000463244 FKBP4Q02790 459 aaKnown RBP eCLIP27.65■■■□□ 2.02
CPSF7-209ENST00000463244 LDHDQ86WU2 507 aa27.64■■■□□ 2.02
CPSF7-209ENST00000463244 TAF1DQ9H5J8 278 aaPredicted RBP27.64■■■□□ 2.02
CPSF7-209ENST00000463244 TAF7Q15545 349 aaPredicted RBP27.63■■■□□ 2.01
CPSF7-209ENST00000463244 OLFM4Q6UX06 510 aa27.63■■■□□ 2.01
CPSF7-209ENST00000463244 ZNF277Q9NRM2 450 aaPredicted RBP27.63■■■□□ 2.01
CPSF7-209ENST00000463244 MKRN1Q9UHC7 482 aaKnown RBP27.63■■■□□ 2.01
CPSF7-209ENST00000463244 PASKQ96RG2 1323 aa27.63■■■□□ 2.01
CPSF7-209ENST00000463244 HLFQ16534 295 aa27.62■■■□□ 2.01
CPSF7-209ENST00000463244 RTKN2Q8IZC4 609 aa27.62■■■□□ 2.01
CPSF7-209ENST00000463244 FAM177BA6PVY3 158 aa27.61■■■□□ 2.01
CPSF7-209ENST00000463244 ZNF541Q9H0D2 1346 aa27.61■■■□□ 2.01
CPSF7-209ENST00000463244 DLG5Q8TDM6 1919 aa27.6■■■□□ 2.01
CPSF7-209ENST00000463244 CNTNAP1P78357 1384 aa27.6■■■□□ 2.01
CPSF7-209ENST00000463244 KDM3BQ7LBC6 1761 aa27.59■■■□□ 2.01
CPSF7-209ENST00000463244 ALDH1B1P30837 517 aa27.59■■■□□ 2.01
CPSF7-209ENST00000463244 MIS18AQ9NYP9 233 aa27.59■■■□□ 2.01
CPSF7-209ENST00000463244 NUP98P52948 1817 aa27.59■■■□□ 2.01
CPSF7-209ENST00000463244 ADAMTSL1Q8N6G6 1762 aa27.58■■■□□ 2
CPSF7-209ENST00000463244 HACL1Q9UJ83 578 aa27.57■■■□□ 2
CPSF7-209ENST00000463244 SNED1Q8TER0 1413 aa27.57■■■□□ 2
CPSF7-209ENST00000463244 ITGBL1O95965 494 aaPredicted RBP27.56■■■□□ 2
CPSF7-209ENST00000463244 GTF2E1P29083 439 aaPredicted RBP27.56■■■□□ 2
CPSF7-209ENST00000463244 IARSP41252 1262 aaKnown RBP27.56■■■□□ 2
CPSF7-209ENST00000463244 FZD9O00144 591 aa27.55■■■□□ 2
CPSF7-209ENST00000463244 CRY2Q49AN0 593 aa27.55■■■□□ 2
CPSF7-209ENST00000463244 EAPPQ56P03 285 aaPredicted RBP27.55■■■□□ 2
CPSF7-209ENST00000463244 SYNE4Q8N205 404 aa27.55■■■□□ 2
CPSF7-209ENST00000463244 ABCC12Q96J65 1359 aa27.55■■■□□ 2
CPSF7-209ENST00000463244 ERVV-1B6SEH8 477 aa27.54■■■□□ 2
CPSF7-209ENST00000463244 NYXQ9GZU5 481 aa27.54■■■□□ 2
CPSF7-209ENST00000463244 TMEM88BA6NKF7 163 aa27.53■■■□□ 2
CPSF7-209ENST00000463244 EPHX2P34913 555 aa27.53■■■□□ 2
CPSF7-209ENST00000463244 PSMD1Q99460 953 aa27.53■■■□□ 2
CPSF7-209ENST00000463244 RNF123Q5XPI4 1314 aa27.52■■■□□ 2
CPSF7-209ENST00000463244 NUTM1Q86Y26 1132 aa27.52■■■□□ 2
CPSF7-209ENST00000463244 PNISRQ8TF01 805 aaKnown RBP27.52■■■□□ 2
CPSF7-209ENST00000463244 MAP3K15Q6ZN16 1313 aa27.51■■□□□ 1.99
CPSF7-209ENST00000463244 PNMA8AQ86V59 439 aaPredicted RBP27.51■■□□□ 1.99
CPSF7-209ENST00000463244 GPC2Q8N158 579 aa27.51■■□□□ 1.99
CPSF7-209ENST00000463244 NGEFQ8N5V2 710 aa27.51■■□□□ 1.99
CPSF7-209ENST00000463244 FOXN1O15353 648 aa27.5■■□□□ 1.99
CPSF7-209ENST00000463244 EIF4A1P60842 406 aaKnown RBP27.5■■□□□ 1.99
CPSF7-209ENST00000463244 TTLL7Q6ZT98 887 aa27.5■■□□□ 1.99
CPSF7-209ENST00000463244 CLEC11AQ9Y240 323 aa27.5■■□□□ 1.99
CPSF7-209ENST00000463244 RIC1Q4ADV7 1423 aa27.5■■□□□ 1.99
CPSF7-209ENST00000463244 IBTKQ9P2D0 1353 aaPredicted RBP27.49■■□□□ 1.99
CPSF7-209ENST00000463244 NEFMP07197 916 aa27.49■■□□□ 1.99
CPSF7-209ENST00000463244 VEGFBP49765 207 aa27.49■■□□□ 1.99
CPSF7-209ENST00000463244 CC2D2BQ6DHV5 1058 aa27.49■■□□□ 1.99
CPSF7-209ENST00000463244 KIF6Q6ZMV9 814 aa27.49■■□□□ 1.99
CPSF7-209ENST00000463244 RRP7AQ9Y3A4 280 aaKnown RBP27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms