RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-204ENST00000462815 KLRG2A4D1S0 409 aaPredicted RBP14.99□□□□□ -0.01
PTPN7-204ENST00000462815 NBPF26B4DH59 902 aa14.99□□□□□ -0.01
PTPN7-204ENST00000462815 STYK1Q6J9G0 422 aa14.99□□□□□ -0.01
PTPN7-204ENST00000462815 PRPF40BQ6NWY9 871 aaKnown RBP14.99□□□□□ -0.01
PTPN7-204ENST00000462815 NBPF10Q6P3W6 841 aaKnown RBP14.99□□□□□ -0.01
PTPN7-204ENST00000462815 DZIP3Q86Y13 1208 aaKnown RBP14.99□□□□□ -0.01
PTPN7-204ENST00000462815 NBPF15Q8N660 670 aa14.99□□□□□ -0.01
PTPN7-204ENST00000462815 SETDB2Q96T68 719 aa14.99□□□□□ -0.01
PTPN7-204ENST00000462815 ZNF330Q9Y3S2 320 aaPredicted RBP14.99□□□□□ -0.01
PTPN7-204ENST00000462815 PPP2R1AP30153 589 aa14.98□□□□□ -0.01
PTPN7-204ENST00000462815 MCM10Q7L590 875 aa14.98□□□□□ -0.01
PTPN7-204ENST00000462815 KDM3BQ7LBC6 1761 aa14.98□□□□□ -0.01
PTPN7-204ENST00000462815 RGL2O15211 777 aa14.97□□□□□ -0.01
PTPN7-204ENST00000462815 ERFEQ4G0M1 354 aa14.97□□□□□ -0.01
PTPN7-204ENST00000462815 CLEC4GQ6UXB4 293 aa14.97□□□□□ -0.01
PTPN7-204ENST00000462815 TAOK3Q9H2K8 898 aa14.97□□□□□ -0.01
PTPN7-204ENST00000462815 ZNF219Q9P2Y4 722 aaPredicted RBP14.97□□□□□ -0.01
PTPN7-204ENST00000462815 ADAMTSL1Q8N6G6 1762 aa14.96□□□□□ -0.01
PTPN7-204ENST00000462815 SNRPA1P09661 255 aaKnown RBP14.96□□□□□ -0.01
PTPN7-204ENST00000462815 POTEIP0CG38 1075 aa14.96□□□□□ -0.01
PTPN7-204ENST00000462815 POTEJP0CG39 1038 aa14.96□□□□□ -0.01
PTPN7-204ENST00000462815 DCTN1Q14203 1278 aa14.96□□□□□ -0.01
PTPN7-204ENST00000462815 CNKSR1Q969H4 720 aa14.96□□□□□ -0.01
PTPN7-204ENST00000462815 MASTLQ96GX5 879 aa14.96□□□□□ -0.01
PTPN7-204ENST00000462815 ST5P78524 1137 aa14.95□□□□□ -0.02
PTPN7-204ENST00000462815 CFAP53Q96M91 514 aa14.95□□□□□ -0.02
PTPN7-204ENST00000462815 DLG5Q8TDM6 1919 aa14.94□□□□□ -0.02
PTPN7-204ENST00000462815 HTATSF1O43719 755 aaKnown RBP14.94□□□□□ -0.02
PTPN7-204ENST00000462815 CAPN15O75808 1086 aa14.94□□□□□ -0.02
PTPN7-204ENST00000462815 DDNO94850 711 aaPredicted RBP14.94□□□□□ -0.02
PTPN7-204ENST00000462815 U2AF1L5P0DN76 240 aaPredicted RBP14.94□□□□□ -0.02
PTPN7-204ENST00000462815 U2AF1Q01081 240 aaKnown RBP eCLIP14.94□□□□□ -0.02
PTPN7-204ENST00000462815 HLFQ16534 295 aa14.93□□□□□ -0.02
PTPN7-204ENST00000462815 DPY19L2Q6NUT2 758 aa14.93□□□□□ -0.02
PTPN7-204ENST00000462815 NBPF5PQ86XG9 351 aaPredicted RBP14.93□□□□□ -0.02
PTPN7-204ENST00000462815 L3MBTL3Q96JM7 780 aaPredicted RBP14.93□□□□□ -0.02
PTPN7-204ENST00000462815 SCN4AP35499 1836 aa14.93□□□□□ -0.02
PTPN7-204ENST00000462815 NPR1P16066 1061 aa14.92□□□□□ -0.02
PTPN7-204ENST00000462815 SOGA3Q5TF21 947 aa14.92□□□□□ -0.02
PTPN7-204ENST00000462815 OLFM4Q6UX06 510 aa14.92□□□□□ -0.02
PTPN7-204ENST00000462815 NUDCQ9Y266 331 aa14.92□□□□□ -0.02
PTPN7-204ENST00000462815 ABCC12Q96J65 1359 aa14.92□□□□□ -0.02
PTPN7-204ENST00000462815 COL4A5P29400 1685 aa14.92□□□□□ -0.02
PTPN7-204ENST00000462815 PASKQ96RG2 1323 aa14.92□□□□□ -0.02
PTPN7-204ENST00000462815 HSPA1AP0DMV8 641 aaKnown RBP14.91□□□□□ -0.02
PTPN7-204ENST00000462815 HSPA1BP0DMV9 641 aaKnown RBP14.91□□□□□ -0.02
PTPN7-204ENST00000462815 CHADLQ6NUI6 762 aa14.91□□□□□ -0.02
PTPN7-204ENST00000462815 PLEKHF1Q96S99 279 aa14.91□□□□□ -0.02
PTPN7-204ENST00000462815 ZNF652Q9Y2D9 606 aa14.91□□□□□ -0.02
PTPN7-204ENST00000462815 RIC1Q4ADV7 1423 aa14.91□□□□□ -0.02
PTPN7-204ENST00000462815 ZNF541Q9H0D2 1346 aa14.91□□□□□ -0.02
PTPN7-204ENST00000462815 FKBP4Q02790 459 aaKnown RBP eCLIP14.9□□□□□ -0.02
PTPN7-204ENST00000462815 CRY2Q49AN0 593 aa14.9□□□□□ -0.02
PTPN7-204ENST00000462815 CCDC93Q567U6 631 aa14.9□□□□□ -0.02
PTPN7-204ENST00000462815 RTF1Q92541 710 aaKnown RBP14.9□□□□□ -0.02
PTPN7-204ENST00000462815 CREBZFQ9NS37 354 aa14.9□□□□□ -0.02
PTPN7-204ENST00000462815 MIS18AQ9NYP9 233 aa14.9□□□□□ -0.02
PTPN7-204ENST00000462815 NIP7Q9Y221 180 aaKnown RBP eCLIP14.9□□□□□ -0.02
PTPN7-204ENST00000462815 NUP98P52948 1817 aa14.89□□□□□ -0.03
PTPN7-204ENST00000462815 TAF7Q15545 349 aaPredicted RBP14.89□□□□□ -0.03
PTPN7-204ENST00000462815 NPM2Q86SE8 214 aaKnown RBP14.89□□□□□ -0.03
PTPN7-204ENST00000462815 TAF1DQ9H5J8 278 aaPredicted RBP14.89□□□□□ -0.03
PTPN7-204ENST00000462815 TPTE2Q6XPS3 522 aa14.88□□□□□ -0.03
PTPN7-204ENST00000462815 SLC51AQ86UW1 340 aa14.88□□□□□ -0.03
PTPN7-204ENST00000462815 TNS4Q8IZW8 715 aa14.88□□□□□ -0.03
PTPN7-204ENST00000462815 ZNF277Q9NRM2 450 aaPredicted RBP14.88□□□□□ -0.03
PTPN7-204ENST00000462815 LTBP1Q14766 1721 aa14.88□□□□□ -0.03
PTPN7-204ENST00000462815 IBTKQ9P2D0 1353 aaPredicted RBP14.87□□□□□ -0.03
PTPN7-204ENST00000462815 NPHP1O15259 732 aa14.87□□□□□ -0.03
PTPN7-204ENST00000462815 ITGBL1O95965 494 aaPredicted RBP14.87□□□□□ -0.03
PTPN7-204ENST00000462815 EIF4A1P60842 406 aaKnown RBP14.87□□□□□ -0.03
PTPN7-204ENST00000462815 LDHDQ86WU2 507 aa14.87□□□□□ -0.03
PTPN7-204ENST00000462815 UBN2Q6ZU65 1347 aa14.87□□□□□ -0.03
PTPN7-204ENST00000462815 CNTNAP1P78357 1384 aa14.86□□□□□ -0.03
PTPN7-204ENST00000462815 ERVV-1B6SEH8 477 aa14.86□□□□□ -0.03
PTPN7-204ENST00000462815 FZD9O00144 591 aa14.86□□□□□ -0.03
PTPN7-204ENST00000462815 TTLL7Q6ZT98 887 aa14.86□□□□□ -0.03
PTPN7-204ENST00000462815 LRP10Q7Z4F1 713 aa14.86□□□□□ -0.03
PTPN7-204ENST00000462815 MAP3K15Q6ZN16 1313 aa14.86□□□□□ -0.03
PTPN7-204ENST00000462815 IQCA1LA6NCM1 817 aa14.85□□□□□ -0.03
PTPN7-204ENST00000462815 FAM177BA6PVY3 158 aa14.85□□□□□ -0.03
PTPN7-204ENST00000462815 RTKN2Q8IZC4 609 aa14.85□□□□□ -0.03
PTPN7-204ENST00000462815 THUMPD2Q9BTF0 503 aaKnown RBP14.85□□□□□ -0.03
PTPN7-204ENST00000462815 HOXA10P31260 410 aaPredicted RBP14.84□□□□□ -0.03
PTPN7-204ENST00000462815 IARSP41252 1262 aaKnown RBP14.84□□□□□ -0.03
PTPN7-204ENST00000462815 NUTM1Q86Y26 1132 aa14.84□□□□□ -0.03
PTPN7-204ENST00000462815 PSMD1Q99460 953 aa14.84□□□□□ -0.03
PTPN7-204ENST00000462815 MKRN1Q9UHC7 482 aaKnown RBP14.84□□□□□ -0.03
PTPN7-204ENST00000462815 ALDH1B1P30837 517 aa14.83□□□□□ -0.04
PTPN7-204ENST00000462815 NFE2L2Q16236 605 aa14.83□□□□□ -0.04
PTPN7-204ENST00000462815 ZNF34Q8IZ26 560 aa14.83□□□□□ -0.04
PTPN7-204ENST00000462815 SYNE4Q8N205 404 aa14.83□□□□□ -0.04
PTPN7-204ENST00000462815 PNISRQ8TF01 805 aaKnown RBP14.83□□□□□ -0.04
PTPN7-204ENST00000462815 NTSR2O95665 410 aa14.82□□□□□ -0.04
PTPN7-204ENST00000462815 SUSD4Q5VX71 490 aa14.82□□□□□ -0.04
PTPN7-204ENST00000462815 C3orf67Q6ZVT6 689 aa14.82□□□□□ -0.04
PTPN7-204ENST00000462815 RNF123Q5XPI4 1314 aa14.82□□□□□ -0.04
PTPN7-204ENST00000462815 THSD7BQ9C0I4 1608 aa14.81□□□□□ -0.04
PTPN7-204ENST00000462815 EPHX2P34913 555 aa14.81□□□□□ -0.04
PTPN7-204ENST00000462815 PDIA6Q15084 440 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms