RNA–Protein interactions for RNA: ENST00000462723.1

RPA3-205, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-205ENST00000462723 KRT24Q2M2I5 525 aa10.46□□□□□ -0.73
RPA3-205ENST00000462723 NFATC2IPQ8NCF5 419 aa10.46□□□□□ -0.73
RPA3-205ENST00000462723 PPP4R2Q9NY27 417 aa10.46□□□□□ -0.73
RPA3-205ENST00000462723 TNS2Q63HR2 1409 aa10.46□□□□□ -0.74
RPA3-205ENST00000462723 CACNA1FO60840 1977 aa10.45□□□□□ -0.74
RPA3-205ENST00000462723 HOXB7P09629 217 aa10.45□□□□□ -0.74
RPA3-205ENST00000462723 EIF4A1P60842 406 aaKnown RBP10.45□□□□□ -0.74
RPA3-205ENST00000462723 DDB1Q16531 1140 aa10.45□□□□□ -0.74
RPA3-205ENST00000462723 MRPL50Q8N5N7 158 aaKnown RBP10.45□□□□□ -0.74
RPA3-205ENST00000462723 AFF2P51816 1311 aa10.44□□□□□ -0.74
RPA3-205ENST00000462723 C20orf194Q5TEA3 1177 aa10.44□□□□□ -0.74
RPA3-205ENST00000462723 CCDC30Q5VVM6 783 aa10.44□□□□□ -0.74
RPA3-205ENST00000462723 ZNF790Q6PG37 636 aa10.44□□□□□ -0.74
RPA3-205ENST00000462723 ATF7IPQ6VMQ6 1270 aa10.44□□□□□ -0.74
RPA3-205ENST00000462723 FTSJ3Q8IY81 847 aaKnown RBP10.44□□□□□ -0.74
RPA3-205ENST00000462723 TTC5Q8N0Z6 440 aa10.44□□□□□ -0.74
RPA3-205ENST00000462723 SPRYD3Q8NCJ5 442 aa10.44□□□□□ -0.74
RPA3-205ENST00000462723 EXOC6Q8TAG9 804 aa10.44□□□□□ -0.74
RPA3-205ENST00000462723 ARHGAP45Q92619 1136 aa10.44□□□□□ -0.74
RPA3-205ENST00000462723 CRBNQ96SW2 442 aa10.44□□□□□ -0.74
RPA3-205ENST00000462723 STK31Q9BXU1 1019 aa10.44□□□□□ -0.74
RPA3-205ENST00000462723 NOB1Q9ULX3 412 aaKnown RBP10.44□□□□□ -0.74
RPA3-205ENST00000462723 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.43□□□□□ -0.74
RPA3-205ENST00000462723 TCERG1O14776 1098 aaKnown RBP10.43□□□□□ -0.74
RPA3-205ENST00000462723 KCNQ3O43525 872 aa10.43□□□□□ -0.74
RPA3-205ENST00000462723 NUDT7P0C024 238 aa10.43□□□□□ -0.74
RPA3-205ENST00000462723 HDGFL1Q5TGJ6 251 aa10.43□□□□□ -0.74
RPA3-205ENST00000462723 DZIP1LQ8IYY4 767 aaKnown RBP10.43□□□□□ -0.74
RPA3-205ENST00000462723 ZFP91Q96JP5 570 aaPredicted RBP10.43□□□□□ -0.74
RPA3-205ENST00000462723 TOGARAM1Q9Y4F4 1720 aa10.42□□□□□ -0.74
RPA3-205ENST00000462723 TRIM27P14373 513 aa10.42□□□□□ -0.74
RPA3-205ENST00000462723 FAM98CQ17RN3 349 aaKnown RBP10.42□□□□□ -0.74
RPA3-205ENST00000462723 PANK1Q8TE04 598 aa10.42□□□□□ -0.74
RPA3-205ENST00000462723 FMNL2Q96PY5 1086 aa10.42□□□□□ -0.74
RPA3-205ENST00000462723 API5Q9BZZ5 524 aaKnown RBP10.42□□□□□ -0.74
RPA3-205ENST00000462723 TMOD3Q9NYL9 352 aa10.42□□□□□ -0.74
RPA3-205ENST00000462723 TRPC5Q9UL62 973 aaPredicted RBP10.42□□□□□ -0.74
RPA3-205ENST00000462723 KAT6BQ8WYB5 2073 aa10.42□□□□□ -0.74
RPA3-205ENST00000462723 HEG1Q9ULI3 1381 aa10.41□□□□□ -0.74
RPA3-205ENST00000462723 PTPRCP08575 1304 aa10.41□□□□□ -0.74
RPA3-205ENST00000462723 GIGYF1O75420 1035 aaPredicted RBP10.41□□□□□ -0.74
RPA3-205ENST00000462723 SLC39A6Q13433 755 aa10.41□□□□□ -0.74
RPA3-205ENST00000462723 HS6ST3Q8IZP7 471 aa10.41□□□□□ -0.74
RPA3-205ENST00000462723 CLUAP1Q96AJ1 413 aa10.41□□□□□ -0.74
RPA3-205ENST00000462723 LHX6Q9UPM6 363 aa10.41□□□□□ -0.74
RPA3-205ENST00000462723 ITGB4P16144 1822 aa10.41□□□□□ -0.74
RPA3-205ENST00000462723 PAPPAQ13219 1627 aa10.4□□□□□ -0.74
RPA3-205ENST00000462723 A0A0G2JS52 829 aa10.4□□□□□ -0.74
RPA3-205ENST00000462723 MYT1Q01538 1121 aa10.4□□□□□ -0.74
RPA3-205ENST00000462723 AAMPQ13685 434 aa10.4□□□□□ -0.74
RPA3-205ENST00000462723 ADGRD1Q6QNK2 874 aa10.4□□□□□ -0.74
RPA3-205ENST00000462723 CCDC136Q96JN2 1154 aa10.4□□□□□ -0.74
RPA3-205ENST00000462723 GJD4Q96KN9 370 aaPredicted RBP10.4□□□□□ -0.74
RPA3-205ENST00000462723 COG6Q9Y2V7 657 aa10.4□□□□□ -0.74
RPA3-205ENST00000462723 ATRNO75882 1429 aa10.4□□□□□ -0.75
RPA3-205ENST00000462723 UBR2Q8IWV8 1755 aa10.39□□□□□ -0.75
RPA3-205ENST00000462723 DOT1LQ8TEK3 1739 aa10.39□□□□□ -0.75
RPA3-205ENST00000462723 THSD7AQ9UPZ6 1657 aa10.39□□□□□ -0.75
RPA3-205ENST00000462723 STK25O00506 426 aa10.39□□□□□ -0.75
RPA3-205ENST00000462723 SNRPA1P09661 255 aaKnown RBP10.39□□□□□ -0.75
RPA3-205ENST00000462723 RLBP1P12271 317 aa10.39□□□□□ -0.75
RPA3-205ENST00000462723 EIF2S2P20042 333 aaKnown RBP10.39□□□□□ -0.75
RPA3-205ENST00000462723 MVPQ14764 893 aaKnown RBP10.39□□□□□ -0.75
RPA3-205ENST00000462723 NECTIN2Q92692 538 aa10.39□□□□□ -0.75
RPA3-205ENST00000462723 ZNF496Q96IT1 587 aaPredicted RBP10.39□□□□□ -0.75
RPA3-205ENST00000462723 TNNQ9UQP3 1299 aa10.39□□□□□ -0.75
RPA3-205ENST00000462723 GLI3P10071 1580 aa10.39□□□□□ -0.75
RPA3-205ENST00000462723 C5P01031 1676 aa10.38□□□□□ -0.75
RPA3-205ENST00000462723 ITPRIPQ8IWB1 547 aa10.38□□□□□ -0.75
RPA3-205ENST00000462723 MARCH10Q8NA82 808 aaPredicted RBP10.38□□□□□ -0.75
RPA3-205ENST00000462723 FBXO41Q8TF61 875 aa10.38□□□□□ -0.75
RPA3-205ENST00000462723 PIGBQ92521 554 aa10.38□□□□□ -0.75
RPA3-205ENST00000462723 SYTL4Q96C24 671 aaPredicted RBP10.38□□□□□ -0.75
RPA3-205ENST00000462723 CHMP4BQ9H444 224 aaKnown RBP10.38□□□□□ -0.75
RPA3-205ENST00000462723 DBF4Q9UBU7 674 aaPredicted RBP10.38□□□□□ -0.75
RPA3-205ENST00000462723 DDX19BQ9UMR2 479 aa10.38□□□□□ -0.75
RPA3-205ENST00000462723 LAMB4A4D0S4 1761 aa10.38□□□□□ -0.75
RPA3-205ENST00000462723 BCL9O00512 1426 aa10.38□□□□□ -0.75
RPA3-205ENST00000462723 ABCC4O15439 1325 aa10.37□□□□□ -0.75
RPA3-205ENST00000462723 PRIM1P49642 420 aaKnown RBP10.37□□□□□ -0.75
RPA3-205ENST00000462723 B4GALNT3Q6L9W6 998 aa10.37□□□□□ -0.75
RPA3-205ENST00000462723 TMEM57Q8N5G2 664 aa10.37□□□□□ -0.75
RPA3-205ENST00000462723 QTRT2Q9H974 415 aaKnown RBP10.37□□□□□ -0.75
RPA3-205ENST00000462723 CHPF2Q9P2E5 772 aa10.37□□□□□ -0.75
RPA3-205ENST00000462723 KCPQ6ZWJ8 1503 aa10.37□□□□□ -0.75
RPA3-205ENST00000462723 ONECUT3O60422 494 aaPredicted RBP10.36□□□□□ -0.75
RPA3-205ENST00000462723 FLIIQ13045 1269 aa10.36□□□□□ -0.75
RPA3-205ENST00000462723 FKBP5Q13451 457 aaPredicted RBP10.36□□□□□ -0.75
RPA3-205ENST00000462723 ZNF772Q68DY9 489 aaPredicted RBP10.36□□□□□ -0.75
RPA3-205ENST00000462723 G2E3Q7L622 706 aa10.36□□□□□ -0.75
RPA3-205ENST00000462723 HYPKQ9NX55 129 aa10.36□□□□□ -0.75
RPA3-205ENST00000462723 RGS12O14924 1447 aa10.35□□□□□ -0.75
RPA3-205ENST00000462723 PRAMEF22A3QJZ6 481 aa10.35□□□□□ -0.75
RPA3-205ENST00000462723 ARHGAP33O14559 1287 aa10.35□□□□□ -0.75
RPA3-205ENST00000462723 PTCD1O75127 700 aaKnown RBP10.35□□□□□ -0.75
RPA3-205ENST00000462723 INTS3Q68E01 1043 aaKnown RBP10.35□□□□□ -0.75
RPA3-205ENST00000462723 VSIG10Q8N0Z9 540 aa10.35□□□□□ -0.75
RPA3-205ENST00000462723 TEX13AQ9BXU3 409 aaPredicted RBP10.35□□□□□ -0.75
RPA3-205ENST00000462723 DDX21Q9NR30 783 aaKnown RBP eCLIP10.35□□□□□ -0.75
RPA3-205ENST00000462723 ATG3Q9NT62 314 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms