RNA–Protein interactions for RNA: ENST00000462112.1

SSR1-203, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4 BASIC

Gene SSR1, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-203ENST00000462112 DUSP27Q5VZP5 1158 aa10.55□□□□□ -0.72
SSR1-203ENST00000462112 USPL1Q5W0Q7 1092 aa10.55□□□□□ -0.72
SSR1-203ENST00000462112 SETDB2Q96T68 719 aa10.55□□□□□ -0.72
SSR1-203ENST00000462112 MYH14Q7Z406 1995 aaKnown RBP10.54□□□□□ -0.72
SSR1-203ENST00000462112 DDX58O95786 925 aaKnown RBP10.54□□□□□ -0.72
SSR1-203ENST00000462112 MYL6BP14649 208 aa10.54□□□□□ -0.72
SSR1-203ENST00000462112 GTF2E1P29083 439 aaPredicted RBP10.54□□□□□ -0.72
SSR1-203ENST00000462112 HSP90AB3PQ58FF7 597 aa10.54□□□□□ -0.72
SSR1-203ENST00000462112 MIER1Q8N108 512 aa10.54□□□□□ -0.72
SSR1-203ENST00000462112 DDX21Q9NR30 783 aaKnown RBP eCLIP10.54□□□□□ -0.72
SSR1-203ENST00000462112 HYPKQ9NX55 129 aa10.54□□□□□ -0.72
SSR1-203ENST00000462112 PDZRN3Q9UPQ7 1066 aa10.54□□□□□ -0.72
SSR1-203ENST00000462112 TBC1D2BQ9UPU7 963 aa10.54□□□□□ -0.72
SSR1-203ENST00000462112 LAMB4A4D0S4 1761 aa10.53□□□□□ -0.72
SSR1-203ENST00000462112 ERVV-1B6SEH8 477 aa10.53□□□□□ -0.72
SSR1-203ENST00000462112 SGIP1Q9BQI5 828 aa10.53□□□□□ -0.72
SSR1-203ENST00000462112 SYT17Q9BSW7 474 aa10.53□□□□□ -0.72
SSR1-203ENST00000462112 FHDC1Q9C0D6 1143 aaPredicted RBP10.53□□□□□ -0.72
SSR1-203ENST00000462112 SRP68Q9UHB9 627 aaKnown RBP10.53□□□□□ -0.72
SSR1-203ENST00000462112 PRAMEF22A3QJZ6 481 aa10.52□□□□□ -0.73
SSR1-203ENST00000462112 E9PSI1 815 aa10.52□□□□□ -0.73
SSR1-203ENST00000462112 TGFB2P61812 414 aa10.52□□□□□ -0.73
SSR1-203ENST00000462112 ST5P78524 1137 aa10.52□□□□□ -0.73
SSR1-203ENST00000462112 TPTE2Q6XPS3 522 aa10.52□□□□□ -0.73
SSR1-203ENST00000462112 NYXQ9GZU5 481 aa10.52□□□□□ -0.73
SSR1-203ENST00000462112 CARMIL3Q8ND23 1372 aa10.52□□□□□ -0.73
SSR1-203ENST00000462112 ELL2O00472 640 aaPredicted RBP10.51□□□□□ -0.73
SSR1-203ENST00000462112 HSP90B1P14625 803 aaKnown RBP10.51□□□□□ -0.73
SSR1-203ENST00000462112 TWISTNBQ3B726 338 aaPredicted RBP10.51□□□□□ -0.73
SSR1-203ENST00000462112 BICDL1Q6ZP65 573 aa10.51□□□□□ -0.73
SSR1-203ENST00000462112 SMIM5Q71RC9 77 aa10.51□□□□□ -0.73
SSR1-203ENST00000462112 AMIGO3Q86WK7 504 aa10.51□□□□□ -0.73
SSR1-203ENST00000462112 NECTIN2Q92692 538 aa10.51□□□□□ -0.73
SSR1-203ENST00000462112 MAP3K15Q6ZN16 1313 aa10.51□□□□□ -0.73
SSR1-203ENST00000462112 NBPF26B4DH59 902 aa10.5□□□□□ -0.73
SSR1-203ENST00000462112 CAMTA2O94983 1202 aa10.5□□□□□ -0.73
SSR1-203ENST00000462112 SERPINB2P05120 415 aa10.5□□□□□ -0.73
SSR1-203ENST00000462112 TM4SF1P30408 202 aa10.5□□□□□ -0.73
SSR1-203ENST00000462112 PIP4K2AP48426 406 aaPredicted RBP10.5□□□□□ -0.73
SSR1-203ENST00000462112 AIMP1Q12904 312 aaKnown RBP10.5□□□□□ -0.73
SSR1-203ENST00000462112 NFIXQ14938 502 aa10.5□□□□□ -0.73
SSR1-203ENST00000462112 GPR162Q16538 588 aa10.5□□□□□ -0.73
SSR1-203ENST00000462112 PARP10Q53GL7 1025 aa10.5□□□□□ -0.73
SSR1-203ENST00000462112 NBPF10Q6P3W6 841 aaKnown RBP10.5□□□□□ -0.73
SSR1-203ENST00000462112 PPP1R42Q7Z4L9 355 aa10.5□□□□□ -0.73
SSR1-203ENST00000462112 NBPF5PQ86XG9 351 aaPredicted RBP10.5□□□□□ -0.73
SSR1-203ENST00000462112 NBPF15Q8N660 670 aa10.5□□□□□ -0.73
SSR1-203ENST00000462112 NIP7Q9Y221 180 aaKnown RBP eCLIP10.5□□□□□ -0.73
SSR1-203ENST00000462112 C4AP0C0L4 1744 aa10.5□□□□□ -0.73
SSR1-203ENST00000462112 COL24A1Q17RW2 1714 aa10.5□□□□□ -0.73
SSR1-203ENST00000462112 GRIN3BO60391 1043 aa10.49□□□□□ -0.73
SSR1-203ENST00000462112 PDE6BP35913 854 aa10.49□□□□□ -0.73
SSR1-203ENST00000462112 GIGYF2Q6Y7W6 1299 aaKnown RBP10.49□□□□□ -0.73
SSR1-203ENST00000462112 ANKRD13DQ6ZTN6 518 aa10.49□□□□□ -0.73
SSR1-203ENST00000462112 COPS6Q7L5N1 327 aa10.49□□□□□ -0.73
SSR1-203ENST00000462112 PELP1Q8IZL8 1130 aaKnown RBP10.49□□□□□ -0.73
SSR1-203ENST00000462112 CNBD1Q8NA66 436 aa10.49□□□□□ -0.73
SSR1-203ENST00000462112 SPOCK2Q92563 424 aa10.49□□□□□ -0.73
SSR1-203ENST00000462112 TSR2Q969E8 191 aaKnown RBP10.49□□□□□ -0.73
SSR1-203ENST00000462112 ZNF428Q96B54 188 aa10.49□□□□□ -0.73
SSR1-203ENST00000462112 CHPF2Q9P2E5 772 aa10.49□□□□□ -0.73
SSR1-203ENST00000462112 FANCIQ9NVI1 1328 aa10.49□□□□□ -0.73
SSR1-203ENST00000462112 SENP3-EIF4A1A0A087X0R7 540 aa10.48□□□□□ -0.73
SSR1-203ENST00000462112 H0YIN7 160 aa10.48□□□□□ -0.73
SSR1-203ENST00000462112 POLRMTO00411 1230 aaKnown RBP10.48□□□□□ -0.73
SSR1-203ENST00000462112 NEXNQ0ZGT2 675 aa10.48□□□□□ -0.73
SSR1-203ENST00000462112 TBC1D9BQ66K14 1250 aa10.48□□□□□ -0.73
SSR1-203ENST00000462112 RIC3Q7Z5B4 369 aa10.48□□□□□ -0.73
SSR1-203ENST00000462112 PLCD3Q8N3E9 789 aa10.48□□□□□ -0.73
SSR1-203ENST00000462112 C8orf58Q8NAV2 365 aa10.48□□□□□ -0.73
SSR1-203ENST00000462112 PLBD2Q8NHP8 589 aa10.48□□□□□ -0.73
SSR1-203ENST00000462112 XAGE3Q8WTP9 111 aa10.48□□□□□ -0.73
SSR1-203ENST00000462112 ZBTB3Q9H5J0 574 aa10.48□□□□□ -0.73
SSR1-203ENST00000462112 CT47B1P0C2W7 299 aaPredicted RBP10.47□□□□□ -0.73
SSR1-203ENST00000462112 HNRNPUQ00839 825 aaKnown RBP eCLIP10.47□□□□□ -0.73
SSR1-203ENST00000462112 EXOSC9Q06265 439 aaKnown RBP10.47□□□□□ -0.73
SSR1-203ENST00000462112 KRT24Q2M2I5 525 aa10.47□□□□□ -0.73
SSR1-203ENST00000462112 BRIP1Q9BX63 1249 aa10.47□□□□□ -0.73
SSR1-203ENST00000462112 PIM2Q9P1W9 311 aa10.47□□□□□ -0.73
SSR1-203ENST00000462112 RNF123Q5XPI4 1314 aa10.47□□□□□ -0.73
SSR1-203ENST00000462112 PDIA6Q15084 440 aa10.46□□□□□ -0.73
SSR1-203ENST00000462112 TTLL7Q6ZT98 887 aa10.46□□□□□ -0.73
SSR1-203ENST00000462112 TMX4Q9H1E5 349 aaPredicted RBP10.46□□□□□ -0.73
SSR1-203ENST00000462112 BCL2L12Q9HB09 334 aa10.46□□□□□ -0.73
SSR1-203ENST00000462112 PLSCR2Q9NRY7 297 aa10.46□□□□□ -0.73
SSR1-203ENST00000462112 SCN7AQ01118 1682 aa10.46□□□□□ -0.74
SSR1-203ENST00000462112 ATP10DQ9P241 1426 aa10.45□□□□□ -0.74
SSR1-203ENST00000462112 HAX1O00165 279 aa10.45□□□□□ -0.74
SSR1-203ENST00000462112 DDR1Q08345 913 aa10.45□□□□□ -0.74
SSR1-203ENST00000462112 TCIRG1Q13488 830 aa10.45□□□□□ -0.74
SSR1-203ENST00000462112 UTP14AQ9BVJ6 771 aaKnown RBP10.45□□□□□ -0.74
SSR1-203ENST00000462112 C10orf71Q711Q0 1435 aa10.44□□□□□ -0.74
SSR1-203ENST00000462112 IBTKQ9P2D0 1353 aaPredicted RBP10.44□□□□□ -0.74
SSR1-203ENST00000462112 ZNF521Q96K83 1311 aa10.44□□□□□ -0.74
SSR1-203ENST00000462112 FAM177BA6PVY3 158 aa10.44□□□□□ -0.74
SSR1-203ENST00000462112 VAMP4O75379 141 aa10.44□□□□□ -0.74
SSR1-203ENST00000462112 ANXA1P04083 346 aa10.44□□□□□ -0.74
SSR1-203ENST00000462112 GPTP24298 496 aa10.44□□□□□ -0.74
SSR1-203ENST00000462112 SLFN5Q08AF3 891 aa10.44□□□□□ -0.74
SSR1-203ENST00000462112 HLFQ16534 295 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms