RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 SCN7AQ01118 1682 aa20.47■□□□□ 0.87
SF3A3-203ENST00000461869 BTBD11A6QL63 1104 aa20.46■□□□□ 0.87
SF3A3-203ENST00000461869 CAPN15O75808 1086 aa20.46■□□□□ 0.87
SF3A3-203ENST00000461869 HSPA1AP0DMV8 641 aaKnown RBP20.46■□□□□ 0.87
SF3A3-203ENST00000461869 HSPA1BP0DMV9 641 aaKnown RBP20.46■□□□□ 0.87
SF3A3-203ENST00000461869 ST5P78524 1137 aa20.46■□□□□ 0.87
SF3A3-203ENST00000461869 STYK1Q6J9G0 422 aa20.46■□□□□ 0.87
SF3A3-203ENST00000461869 LTBP3Q9NS15 1303 aa20.46■□□□□ 0.87
SF3A3-203ENST00000461869 KCNQ3O43525 872 aa20.45■□□□□ 0.86
SF3A3-203ENST00000461869 SRGNP10124 158 aa20.45■□□□□ 0.86
SF3A3-203ENST00000461869 DZIP3Q86Y13 1208 aaKnown RBP20.45■□□□□ 0.86
SF3A3-203ENST00000461869 PNISRQ8TF01 805 aaKnown RBP20.45■□□□□ 0.86
SF3A3-203ENST00000461869 CFAP53Q96M91 514 aa20.45■□□□□ 0.86
SF3A3-203ENST00000461869 CEMIPQ8WUJ3 1361 aa20.45■□□□□ 0.86
SF3A3-203ENST00000461869 PRPF40BQ6NWY9 871 aaKnown RBP20.44■□□□□ 0.86
SF3A3-203ENST00000461869 MASTLQ96GX5 879 aa20.44■□□□□ 0.86
SF3A3-203ENST00000461869 PHACTR3Q96KR7 559 aa20.44■□□□□ 0.86
SF3A3-203ENST00000461869 COL11A2P13942 1736 aaPredicted RBP20.44■□□□□ 0.86
SF3A3-203ENST00000461869 SIPA1L3O60292 1781 aaPredicted RBP20.44■□□□□ 0.86
SF3A3-203ENST00000461869 DDNO94850 711 aaPredicted RBP20.43■□□□□ 0.86
SF3A3-203ENST00000461869 PRKAR2BP31323 418 aa20.43■□□□□ 0.86
SF3A3-203ENST00000461869 SOGA3Q5TF21 947 aa20.43■□□□□ 0.86
SF3A3-203ENST00000461869 FAM9BQ8IZU0 186 aa20.43■□□□□ 0.86
SF3A3-203ENST00000461869 USP16Q9Y5T5 823 aa20.43■□□□□ 0.86
SF3A3-203ENST00000461869 FER1L6Q2WGJ9 1857 aa20.43■□□□□ 0.86
SF3A3-203ENST00000461869 PIP4K2AP48426 406 aaPredicted RBP20.42■□□□□ 0.86
SF3A3-203ENST00000461869 CHADLQ6NUI6 762 aa20.42■□□□□ 0.86
SF3A3-203ENST00000461869 CENPBP07199 599 aaPredicted RBP20.4■□□□□ 0.86
SF3A3-203ENST00000461869 WDR43Q15061 677 aaKnown RBP eCLIP20.4■□□□□ 0.86
SF3A3-203ENST00000461869 CLEC4GQ6UXB4 293 aa20.4■□□□□ 0.86
SF3A3-203ENST00000461869 NBPF5PQ86XG9 351 aaPredicted RBP20.4■□□□□ 0.86
SF3A3-203ENST00000461869 RSPH6AQ9H0K4 717 aa20.4■□□□□ 0.86
SF3A3-203ENST00000461869 CREBZFQ9NS37 354 aa20.4■□□□□ 0.86
SF3A3-203ENST00000461869 DICER1Q9UPY3 1922 aaKnown RBP20.4■□□□□ 0.86
SF3A3-203ENST00000461869 SLX4Q8IY92 1834 aa20.39■□□□□ 0.86
SF3A3-203ENST00000461869 PRAMEF22A3QJZ6 481 aa20.39■□□□□ 0.85
SF3A3-203ENST00000461869 POTEIP0CG38 1075 aa20.39■□□□□ 0.85
SF3A3-203ENST00000461869 POTEJP0CG39 1038 aa20.39■□□□□ 0.85
SF3A3-203ENST00000461869 ZNF652Q9Y2D9 606 aa20.39■□□□□ 0.85
SF3A3-203ENST00000461869 SNRPA1P09661 255 aaKnown RBP20.38■□□□□ 0.85
SF3A3-203ENST00000461869 RTF1Q92541 710 aaKnown RBP20.38■□□□□ 0.85
SF3A3-203ENST00000461869 MKRN1Q9UHC7 482 aaKnown RBP20.38■□□□□ 0.85
SF3A3-203ENST00000461869 IQCA1LA6NCM1 817 aa20.37■□□□□ 0.85
SF3A3-203ENST00000461869 C7orf43Q8WVR3 580 aa20.37■□□□□ 0.85
SF3A3-203ENST00000461869 NUDCQ9Y266 331 aa20.37■□□□□ 0.85
SF3A3-203ENST00000461869 BCORQ6W2J9 1755 aa20.36■□□□□ 0.85
SF3A3-203ENST00000461869 NPR1P16066 1061 aa20.36■□□□□ 0.85
SF3A3-203ENST00000461869 CCDC93Q567U6 631 aa20.36■□□□□ 0.85
SF3A3-203ENST00000461869 TPTE2Q6XPS3 522 aa20.36■□□□□ 0.85
SF3A3-203ENST00000461869 MCM10Q7L590 875 aa20.36■□□□□ 0.85
SF3A3-203ENST00000461869 CACNA1SQ13698 1873 aa20.35■□□□□ 0.85
SF3A3-203ENST00000461869 U2AF1L5P0DN76 240 aaPredicted RBP20.34■□□□□ 0.85
SF3A3-203ENST00000461869 U2AF1Q01081 240 aaKnown RBP eCLIP20.34■□□□□ 0.85
SF3A3-203ENST00000461869 LDHDQ86WU2 507 aa20.34■□□□□ 0.85
SF3A3-203ENST00000461869 L3MBTL3Q96JM7 780 aaPredicted RBP20.34■□□□□ 0.85
SF3A3-203ENST00000461869 TAF1DQ9H5J8 278 aaPredicted RBP20.34■□□□□ 0.85
SF3A3-203ENST00000461869 NIP7Q9Y221 180 aaKnown RBP eCLIP20.34■□□□□ 0.85
SF3A3-203ENST00000461869 KLRG2A4D1S0 409 aaPredicted RBP20.33■□□□□ 0.85
SF3A3-203ENST00000461869 NBPF26B4DH59 902 aa20.33■□□□□ 0.85
SF3A3-203ENST00000461869 HNRNPUQ00839 825 aaKnown RBP eCLIP20.33■□□□□ 0.85
SF3A3-203ENST00000461869 FKBP4Q02790 459 aaKnown RBP eCLIP20.33■□□□□ 0.85
SF3A3-203ENST00000461869 NBPF10Q6P3W6 841 aaKnown RBP20.33■□□□□ 0.85
SF3A3-203ENST00000461869 NBPF15Q8N660 670 aa20.33■□□□□ 0.85
SF3A3-203ENST00000461869 ZNF277Q9NRM2 450 aaPredicted RBP20.33■□□□□ 0.85
SF3A3-203ENST00000461869 ARFGEF2Q9Y6D5 1785 aa20.33■□□□□ 0.84
SF3A3-203ENST00000461869 FAM177BA6PVY3 158 aa20.32■□□□□ 0.84
SF3A3-203ENST00000461869 RGL2O15211 777 aa20.32■□□□□ 0.84
SF3A3-203ENST00000461869 DCTN1Q14203 1278 aa20.32■□□□□ 0.84
SF3A3-203ENST00000461869 RTKN2Q8IZC4 609 aa20.32■□□□□ 0.84
SF3A3-203ENST00000461869 PCNTO95613 3336 aa20.32■□□□□ 0.84
SF3A3-203ENST00000461869 PASKQ96RG2 1323 aa20.3■□□□□ 0.84
SF3A3-203ENST00000461869 HTATSF1O43719 755 aaKnown RBP20.3■□□□□ 0.84
SF3A3-203ENST00000461869 GTF2E1P29083 439 aaPredicted RBP20.3■□□□□ 0.84
SF3A3-203ENST00000461869 EAPPQ56P03 285 aaPredicted RBP20.3■□□□□ 0.84
SF3A3-203ENST00000461869 OLFM4Q6UX06 510 aa20.3■□□□□ 0.84
SF3A3-203ENST00000461869 CNTNAP1P78357 1384 aa20.3■□□□□ 0.84
SF3A3-203ENST00000461869 ZNF541Q9H0D2 1346 aa20.29■□□□□ 0.84
SF3A3-203ENST00000461869 ALDH1B1P30837 517 aa20.29■□□□□ 0.84
SF3A3-203ENST00000461869 HLFQ16534 295 aa20.29■□□□□ 0.84
SF3A3-203ENST00000461869 HACL1Q9UJ83 578 aa20.29■□□□□ 0.84
SF3A3-203ENST00000461869 CLEC11AQ9Y240 323 aa20.29■□□□□ 0.84
SF3A3-203ENST00000461869 ITGBL1O95965 494 aaPredicted RBP20.28■□□□□ 0.84
SF3A3-203ENST00000461869 TAF7Q15545 349 aaPredicted RBP20.28■□□□□ 0.84
SF3A3-203ENST00000461869 ZBED9Q6R2W3 1325 aa20.27■□□□□ 0.84
SF3A3-203ENST00000461869 SCN4AP35499 1836 aa20.27■□□□□ 0.84
SF3A3-203ENST00000461869 TMEM88BA6NKF7 163 aa20.27■□□□□ 0.84
SF3A3-203ENST00000461869 EPHX2P34913 555 aa20.27■□□□□ 0.84
SF3A3-203ENST00000461869 IARSP41252 1262 aaKnown RBP20.27■□□□□ 0.84
SF3A3-203ENST00000461869 SYNE4Q8N205 404 aa20.27■□□□□ 0.84
SF3A3-203ENST00000461869 ADAMTS8Q9UP79 889 aa20.27■□□□□ 0.84
SF3A3-203ENST00000461869 FOXN1O15353 648 aa20.26■□□□□ 0.83
SF3A3-203ENST00000461869 NGEFQ8N5V2 710 aa20.26■□□□□ 0.83
SF3A3-203ENST00000461869 MIS18AQ9NYP9 233 aa20.26■□□□□ 0.83
SF3A3-203ENST00000461869 FZD9O00144 591 aa20.25■□□□□ 0.83
SF3A3-203ENST00000461869 VEGFBP49765 207 aa20.24■□□□□ 0.83
SF3A3-203ENST00000461869 PNMA8AQ86V59 439 aaPredicted RBP20.24■□□□□ 0.83
SF3A3-203ENST00000461869 NYXQ9GZU5 481 aa20.24■□□□□ 0.83
SF3A3-203ENST00000461869 RNF123Q5XPI4 1314 aa20.24■□□□□ 0.83
SF3A3-203ENST00000461869 NUTM1Q86Y26 1132 aa20.23■□□□□ 0.83
SF3A3-203ENST00000461869 AIDAQ96BJ3 306 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms