RNA–Protein interactions for RNA: ENST00000461674.5

LRCH3-210, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 537 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-210ENST00000461674 SPOCK3Q9BQ16 436 aa9.81□□□□□ -0.84
LRCH3-210ENST00000461674 SLC4A5Q9BY07 1137 aa9.81□□□□□ -0.84
LRCH3-210ENST00000461674 TRIM55Q9BYV6 548 aa9.81□□□□□ -0.84
LRCH3-210ENST00000461674 DNAJC25Q9H1X3 360 aa9.81□□□□□ -0.84
LRCH3-210ENST00000461674 C12orf49Q9H741 205 aa9.81□□□□□ -0.84
LRCH3-210ENST00000461674 GEMIN8Q9NWZ8 242 aaKnown RBP9.81□□□□□ -0.84
LRCH3-210ENST00000461674 V9GY48 417 aaPredicted RBP9.81□□□□□ -0.84
LRCH3-210ENST00000461674 A0A1W2PRU2 124 aa9.8□□□□□ -0.84
LRCH3-210ENST00000461674 ZBTB39O15060 712 aa9.8□□□□□ -0.84
LRCH3-210ENST00000461674 CREB3O43889 395 aa9.8□□□□□ -0.84
LRCH3-210ENST00000461674 PPP1R12BO60237 982 aaPredicted RBP9.8□□□□□ -0.84
LRCH3-210ENST00000461674 SCUBE3Q8IX30 993 aa9.8□□□□□ -0.84
LRCH3-210ENST00000461674 UBA5Q9GZZ9 404 aa9.8□□□□□ -0.84
LRCH3-210ENST00000461674 QTRT2Q9H974 415 aaKnown RBP9.8□□□□□ -0.84
LRCH3-210ENST00000461674 EIF1AYO14602 144 aaKnown RBP9.79□□□□□ -0.84
LRCH3-210ENST00000461674 OPLAHO14841 1288 aa9.79□□□□□ -0.84
LRCH3-210ENST00000461674 GIPC1O14908 333 aa9.79□□□□□ -0.84
LRCH3-210ENST00000461674 MMP16P51512 607 aa9.79□□□□□ -0.84
LRCH3-210ENST00000461674 ORC1Q13415 861 aa9.79□□□□□ -0.84
LRCH3-210ENST00000461674 RAB33AQ14088 237 aa9.79□□□□□ -0.84
LRCH3-210ENST00000461674 TAF1CQ15572 869 aaPredicted RBP9.79□□□□□ -0.84
LRCH3-210ENST00000461674 ODR4Q5SWX8 454 aa9.79□□□□□ -0.84
LRCH3-210ENST00000461674 ANKS3Q6ZW76 656 aa9.79□□□□□ -0.84
LRCH3-210ENST00000461674 APBB1IPQ7Z5R6 666 aaPredicted RBP9.79□□□□□ -0.84
LRCH3-210ENST00000461674 PRPF38AQ8NAV1 312 aaKnown RBP9.79□□□□□ -0.84
LRCH3-210ENST00000461674 PCGF6Q9BYE7 350 aa9.79□□□□□ -0.84
LRCH3-210ENST00000461674 UNC93B1Q9H1C4 597 aa9.79□□□□□ -0.84
LRCH3-210ENST00000461674 FANCLQ9NW38 375 aa9.79□□□□□ -0.84
LRCH3-210ENST00000461674 KLF4O43474 513 aa9.78□□□□□ -0.84
LRCH3-210ENST00000461674 PRC1O43663 620 aa9.78□□□□□ -0.84
LRCH3-210ENST00000461674 NR1I2O75469 434 aa9.78□□□□□ -0.84
LRCH3-210ENST00000461674 PDGFAP04085 211 aa9.78□□□□□ -0.84
LRCH3-210ENST00000461674 NEFLP07196 543 aa9.78□□□□□ -0.84
LRCH3-210ENST00000461674 SCNN1DP51172 638 aa9.78□□□□□ -0.84
LRCH3-210ENST00000461674 CHMP4BP1P59074 171 aa9.78□□□□□ -0.84
LRCH3-210ENST00000461674 MEI1Q5TIA1 1274 aa9.78□□□□□ -0.84
LRCH3-210ENST00000461674 C2orf49Q9BVC5 232 aaPredicted RBP9.78□□□□□ -0.84
LRCH3-210ENST00000461674 STRIP2Q9ULQ0 834 aa9.78□□□□□ -0.84
LRCH3-210ENST00000461674 HMGB1P1B2RPK0 211 aaPredicted RBP9.77□□□□□ -0.85
LRCH3-210ENST00000461674 GDF10P55107 478 aa9.77□□□□□ -0.85
LRCH3-210ENST00000461674 DNM1Q05193 864 aaKnown RBP9.77□□□□□ -0.85
LRCH3-210ENST00000461674 RALBP1Q15311 655 aa9.77□□□□□ -0.85
LRCH3-210ENST00000461674 HSP90AB4PQ58FF6 505 aa9.77□□□□□ -0.85
LRCH3-210ENST00000461674 BPHLQ86WA6 291 aaPredicted RBP9.77□□□□□ -0.85
LRCH3-210ENST00000461674 SH3TC2Q8TF17 1288 aa9.77□□□□□ -0.85
LRCH3-210ENST00000461674 EDEM1Q92611 657 aa9.77□□□□□ -0.85
LRCH3-210ENST00000461674 APPBP2Q92624 585 aa9.77□□□□□ -0.85
LRCH3-210ENST00000461674 CDV3Q9UKY7 258 aaKnown RBP9.77□□□□□ -0.85
LRCH3-210ENST00000461674 LRFN2Q9ULH4 789 aa9.77□□□□□ -0.85
LRCH3-210ENST00000461674 RHBDL3P58872 404 aa9.76□□□□□ -0.85
LRCH3-210ENST00000461674 IRX6P78412 446 aaPredicted RBP9.76□□□□□ -0.85
LRCH3-210ENST00000461674 FAM26DQ5JW98 314 aa9.76□□□□□ -0.85
LRCH3-210ENST00000461674 KIAA0907Q7Z7F0 614 aaPredicted RBP9.76□□□□□ -0.85
LRCH3-210ENST00000461674 NKX2-3Q8TAU0 364 aa9.76□□□□□ -0.85
LRCH3-210ENST00000461674 NACADO15069 1562 aa9.75□□□□□ -0.85
LRCH3-210ENST00000461674 NASPP49321 788 aaPredicted RBP9.75□□□□□ -0.85
LRCH3-210ENST00000461674 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.75□□□□□ -0.85
LRCH3-210ENST00000461674 HOMER1Q86YM7 354 aa9.75□□□□□ -0.85
LRCH3-210ENST00000461674 PPARGC1BQ86YN6 1023 aaKnown RBP9.75□□□□□ -0.85
LRCH3-210ENST00000461674 C8orf48Q96LL4 319 aa9.75□□□□□ -0.85
LRCH3-210ENST00000461674 DCBLD2Q96PD2 775 aa9.75□□□□□ -0.85
LRCH3-210ENST00000461674 SPON2Q9BUD6 331 aa9.75□□□□□ -0.85
LRCH3-210ENST00000461674 TTF2Q9UNY4 1162 aaKnown RBP9.75□□□□□ -0.85
LRCH3-210ENST00000461674 ERBB3P21860 1342 aa9.75□□□□□ -0.85
LRCH3-210ENST00000461674 FAM221BA6H8Z2 402 aa9.74□□□□□ -0.85
LRCH3-210ENST00000461674 ETFBP38117 255 aa9.74□□□□□ -0.85
LRCH3-210ENST00000461674 FOXK2Q01167 660 aa9.74□□□□□ -0.85
LRCH3-210ENST00000461674 CBLBQ13191 982 aa9.74□□□□□ -0.85
LRCH3-210ENST00000461674 KIAA0825Q8IV33 1275 aa9.74□□□□□ -0.85
LRCH3-210ENST00000461674 SGSM3Q96HU1 749 aa9.74□□□□□ -0.85
LRCH3-210ENST00000461674 COPRSQ9NQ92 184 aa9.74□□□□□ -0.85
LRCH3-210ENST00000461674 FAM8A1Q9UBU6 413 aa9.74□□□□□ -0.85
LRCH3-210ENST00000461674 CPNE3O75131 537 aaKnown RBP9.73□□□□□ -0.85
LRCH3-210ENST00000461674 SCTRP47872 440 aa9.73□□□□□ -0.85
LRCH3-210ENST00000461674 GYS2P54840 703 aa9.73□□□□□ -0.85
LRCH3-210ENST00000461674 FERMT3Q86UX7 667 aa9.73□□□□□ -0.85
LRCH3-210ENST00000461674 TRPM4Q8TD43 1214 aa9.73□□□□□ -0.85
LRCH3-210ENST00000461674 RELTQ969Z4 430 aa9.73□□□□□ -0.85
LRCH3-210ENST00000461674 CEP89Q96ST8 783 aa9.73□□□□□ -0.85
LRCH3-210ENST00000461674 IER2Q9BTL4 223 aa9.73□□□□□ -0.85
LRCH3-210ENST00000461674 C1QTNF2Q9BXJ5 285 aa9.73□□□□□ -0.85
LRCH3-210ENST00000461674 OSBPL7Q9BZF2 842 aa9.73□□□□□ -0.85
LRCH3-210ENST00000461674 INHAP05111 366 aa9.72□□□□□ -0.85
LRCH3-210ENST00000461674 PCSK2P16519 638 aa9.72□□□□□ -0.85
LRCH3-210ENST00000461674 ZAP70P43403 619 aa9.72□□□□□ -0.85
LRCH3-210ENST00000461674 PSEN2P49810 448 aa9.72□□□□□ -0.85
LRCH3-210ENST00000461674 PSMA6P60900 246 aaKnown RBP9.72□□□□□ -0.85
LRCH3-210ENST00000461674 BIRC2Q13490 618 aa9.72□□□□□ -0.85
LRCH3-210ENST00000461674 AGERQ15109 404 aa9.72□□□□□ -0.85
LRCH3-210ENST00000461674 SPTY2D1Q68D10 685 aaPredicted RBP9.72□□□□□ -0.85
LRCH3-210ENST00000461674 CCSAPQ6IQ19 270 aaPredicted RBP9.72□□□□□ -0.85
LRCH3-210ENST00000461674 FAM160A2Q8N612 972 aaPredicted RBP9.72□□□□□ -0.85
LRCH3-210ENST00000461674 HNRNPLLQ8WVV9 542 aaKnown RBP9.72□□□□□ -0.85
LRCH3-210ENST00000461674 SLC4A9Q96Q91 983 aa9.72□□□□□ -0.85
LRCH3-210ENST00000461674 NBPF3Q9H094 633 aa9.72□□□□□ -0.85
LRCH3-210ENST00000461674 KBTBD4Q9NVX7 518 aa9.72□□□□□ -0.85
LRCH3-210ENST00000461674 ESYT3A0FGR9 886 aa9.71□□□□□ -0.86
LRCH3-210ENST00000461674 PPFIA4O75335 1185 aa9.71□□□□□ -0.86
LRCH3-210ENST00000461674 USP17L7P0C7H9 530 aa9.71□□□□□ -0.86
LRCH3-210ENST00000461674 C4orf46Q504U0 113 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms