RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 WASHC4Q2M389 1173 aa6.67□□□□□ -1.34
RFC4-211ENST00000460408 SYT9Q86SS6 491 aa6.67□□□□□ -1.34
RFC4-211ENST00000460408 ADAMTS19Q8TE59 1207 aa6.67□□□□□ -1.34
RFC4-211ENST00000460408 KRTAP9-6A0A140TA67 174 aa6.66□□□□□ -1.34
RFC4-211ENST00000460408 ADARB2-AS1A8MUL3 147 aa6.66□□□□□ -1.34
RFC4-211ENST00000460408 SIN3BO75182 1162 aa6.66□□□□□ -1.34
RFC4-211ENST00000460408 COL9A3Q14050 684 aaPredicted RBP6.66□□□□□ -1.34
RFC4-211ENST00000460408 PRRT3Q5FWE3 981 aa6.66□□□□□ -1.34
RFC4-211ENST00000460408 BICDL1Q6ZP65 573 aa6.66□□□□□ -1.34
RFC4-211ENST00000460408 GLMNQ92990 594 aa6.66□□□□□ -1.34
RFC4-211ENST00000460408 ARXQ96QS3 562 aa6.66□□□□□ -1.34
RFC4-211ENST00000460408 PRDM6Q9NQX0 595 aa6.66□□□□□ -1.34
RFC4-211ENST00000460408 BACH1O14867 736 aa6.65□□□□□ -1.34
RFC4-211ENST00000460408 SOX11P35716 441 aa6.65□□□□□ -1.34
RFC4-211ENST00000460408 TXLNAP40222 546 aa6.65□□□□□ -1.34
RFC4-211ENST00000460408 FOXD4L6Q3SYB3 417 aaPredicted RBP6.65□□□□□ -1.34
RFC4-211ENST00000460408 FOXD4L3Q6VB84 417 aaPredicted RBP6.65□□□□□ -1.34
RFC4-211ENST00000460408 TPSG1Q9NRR2 321 aa6.65□□□□□ -1.34
RFC4-211ENST00000460408 SCHIP1Q9P0W5 487 aaPredicted RBP6.65□□□□□ -1.34
RFC4-211ENST00000460408 PARP3Q9Y6F1 533 aa6.65□□□□□ -1.34
RFC4-211ENST00000460408 EML1O00423 815 aa6.64□□□□□ -1.35
RFC4-211ENST00000460408 APBA3O96018 575 aa6.64□□□□□ -1.35
RFC4-211ENST00000460408 SEMA3FQ13275 785 aa6.64□□□□□ -1.35
RFC4-211ENST00000460408 TEAD4Q15561 434 aa6.64□□□□□ -1.35
RFC4-211ENST00000460408 ZDHHC1Q8WTX9 485 aa6.64□□□□□ -1.35
RFC4-211ENST00000460408 TNFRSF25Q93038 417 aa6.64□□□□□ -1.35
RFC4-211ENST00000460408 ALG2Q9H553 416 aa6.64□□□□□ -1.35
RFC4-211ENST00000460408 GPC6Q9Y625 555 aaPredicted RBP6.64□□□□□ -1.35
RFC4-211ENST00000460408 DYRK3O43781 588 aa6.63□□□□□ -1.35
RFC4-211ENST00000460408 C7orf43Q8WVR3 580 aa6.63□□□□□ -1.35
RFC4-211ENST00000460408 L3MBTL2Q969R5 705 aa6.63□□□□□ -1.35
RFC4-211ENST00000460408 ARID3AQ99856 593 aa6.63□□□□□ -1.35
RFC4-211ENST00000460408 SERPINA10Q9UK55 444 aa6.63□□□□□ -1.35
RFC4-211ENST00000460408 STARD13Q9Y3M8 1113 aa6.63□□□□□ -1.35
RFC4-211ENST00000460408 M0R082 166 aa6.62□□□□□ -1.35
RFC4-211ENST00000460408 NOS2P35228 1153 aa6.62□□□□□ -1.35
RFC4-211ENST00000460408 EPHA4P54764 986 aa6.62□□□□□ -1.35
RFC4-211ENST00000460408 HDGFL1Q5TGJ6 251 aa6.62□□□□□ -1.35
RFC4-211ENST00000460408 ZNF417Q8TAU3 575 aa6.62□□□□□ -1.35
RFC4-211ENST00000460408 CALR3Q96L12 384 aaKnown RBP6.62□□□□□ -1.35
RFC4-211ENST00000460408 NACC1Q96RE7 527 aa6.62□□□□□ -1.35
RFC4-211ENST00000460408 ZNF587Q96SQ5 575 aaPredicted RBP6.62□□□□□ -1.35
RFC4-211ENST00000460408 ZNF358Q9NW07 568 aa6.62□□□□□ -1.35
RFC4-211ENST00000460408 PIK3CDO00329 1044 aa6.61□□□□□ -1.35
RFC4-211ENST00000460408 LZTS3O60299 673 aaPredicted RBP6.61□□□□□ -1.35
RFC4-211ENST00000460408 SFSWAPQ12872 951 aaKnown RBP6.61□□□□□ -1.35
RFC4-211ENST00000460408 EML3Q32P44 896 aa6.61□□□□□ -1.35
RFC4-211ENST00000460408 LRRC69Q6ZNQ3 347 aa6.61□□□□□ -1.35
RFC4-211ENST00000460408 MICALL1Q8N3F8 863 aa6.61□□□□□ -1.35
RFC4-211ENST00000460408 SLC30A3Q99726 388 aa6.61□□□□□ -1.35
RFC4-211ENST00000460408 NOD1Q9Y239 953 aa6.61□□□□□ -1.35
RFC4-211ENST00000460408 SCO2A0A1W2PP80 73 aa6.6□□□□□ -1.35
RFC4-211ENST00000460408 FAM229AH3BQW9 127 aa6.6□□□□□ -1.35
RFC4-211ENST00000460408 ALBP02768 609 aa6.6□□□□□ -1.35
RFC4-211ENST00000460408 NID1P14543 1247 aa6.6□□□□□ -1.35
RFC4-211ENST00000460408 GTF2IP78347 998 aa6.6□□□□□ -1.35
RFC4-211ENST00000460408 TRIM28Q13263 835 aaKnown RBP6.6□□□□□ -1.35
RFC4-211ENST00000460408 ARTNQ5T4W7 220 aa6.6□□□□□ -1.35
RFC4-211ENST00000460408 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.6□□□□□ -1.35
RFC4-211ENST00000460408 CCDC97Q96F63 343 aaPredicted RBP6.6□□□□□ -1.35
RFC4-211ENST00000460408 C20orf204Q6ZNR8 217 aa6.59□□□□□ -1.35
RFC4-211ENST00000460408 C8orf86Q6ZUL3 223 aa6.59□□□□□ -1.35
RFC4-211ENST00000460408 NFATC2IPQ8NCF5 419 aa6.59□□□□□ -1.35
RFC4-211ENST00000460408 UCN2Q96RP3 112 aa6.59□□□□□ -1.35
RFC4-211ENST00000460408 NEUROD4Q9HD90 331 aa6.59□□□□□ -1.35
RFC4-211ENST00000460408 ADH7P40394 386 aa6.58□□□□□ -1.36
RFC4-211ENST00000460408 SPEM2Q0P670 501 aa6.58□□□□□ -1.36
RFC4-211ENST00000460408 PRSS36Q5K4E3 855 aa6.58□□□□□ -1.36
RFC4-211ENST00000460408 SLC9A9Q8IVB4 645 aa6.58□□□□□ -1.36
RFC4-211ENST00000460408 HOMEZQ8IX15 550 aa6.58□□□□□ -1.36
RFC4-211ENST00000460408 ZFP64Q9NPA5 681 aa6.58□□□□□ -1.36
RFC4-211ENST00000460408 SERTM1A2A2V5 107 aa6.57□□□□□ -1.36
RFC4-211ENST00000460408 SKIP12755 728 aa6.57□□□□□ -1.36
RFC4-211ENST00000460408 KCNQ4P56696 695 aa6.57□□□□□ -1.36
RFC4-211ENST00000460408 NEUROD1Q13562 356 aa6.57□□□□□ -1.36
RFC4-211ENST00000460408 GRIK4Q16099 956 aa6.57□□□□□ -1.36
RFC4-211ENST00000460408 CFAP70Q5T0N1 1121 aa6.57□□□□□ -1.36
RFC4-211ENST00000460408 ZNF232Q9UNY5 417 aa6.57□□□□□ -1.36
RFC4-211ENST00000460408 C9orf172C9J069 976 aa6.56□□□□□ -1.36
RFC4-211ENST00000460408 H2AFB1P0C5Y9 115 aa6.56□□□□□ -1.36
RFC4-211ENST00000460408 H2AFB2P0C5Z0 115 aa6.56□□□□□ -1.36
RFC4-211ENST00000460408 HIRAP54198 1017 aaPredicted RBP6.56□□□□□ -1.36
RFC4-211ENST00000460408 PSME1Q06323 249 aa6.56□□□□□ -1.36
RFC4-211ENST00000460408 NCOA4Q13772 614 aa6.56□□□□□ -1.36
RFC4-211ENST00000460408 ADGRE1Q14246 886 aa6.56□□□□□ -1.36
RFC4-211ENST00000460408 TBCELQ5QJ74 424 aa6.56□□□□□ -1.36
RFC4-211ENST00000460408 SH3PXD2AQ5TCZ1 1133 aa6.56□□□□□ -1.36
RFC4-211ENST00000460408 C1orf53Q5VUE5 145 aa6.56□□□□□ -1.36
RFC4-211ENST00000460408 TNS4Q8IZW8 715 aa6.56□□□□□ -1.36
RFC4-211ENST00000460408 RHPN1Q8TCX5 695 aa6.56□□□□□ -1.36
RFC4-211ENST00000460408 POTEAQ6S8J7 498 aa6.55□□□□□ -1.36
RFC4-211ENST00000460408 KRTAP1-3Q8IUG1 177 aa6.55□□□□□ -1.36
RFC4-211ENST00000460408 PPP1R12CQ9BZL4 782 aa6.55□□□□□ -1.36
RFC4-211ENST00000460408 BRD7Q9NPI1 651 aa6.55□□□□□ -1.36
RFC4-211ENST00000460408 ANKIB1Q9P2G1 1089 aa6.55□□□□□ -1.36
RFC4-211ENST00000460408 PALM3A6NDB9 673 aaPredicted RBP6.54□□□□□ -1.36
RFC4-211ENST00000460408 SELPP16109 830 aa6.54□□□□□ -1.36
RFC4-211ENST00000460408 SRPK2P78362 688 aaKnown RBP6.54□□□□□ -1.36
RFC4-211ENST00000460408 MBTPS1Q14703 1052 aa6.54□□□□□ -1.36
RFC4-211ENST00000460408 RAB44Q7Z6P3 723 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms