RNA–Protein interactions for RNA: ENST00000460072.5

THUMPD2-203, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 3,148 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-203ENST00000460072 ZNF316A6NFI3 1004 aaPredicted RBP9.51□□□□□ -0.89
THUMPD2-203ENST00000460072 MASTLQ96GX5 879 aa9.51□□□□□ -0.89
THUMPD2-203ENST00000460072 LGR6Q9HBX8 967 aa9.51□□□□□ -0.89
THUMPD2-203ENST00000460072 ZNF790Q6PG37 636 aa9.51□□□□□ -0.89
THUMPD2-203ENST00000460072 FMNL2Q96PY5 1086 aa9.51□□□□□ -0.89
THUMPD2-203ENST00000460072 PTCD1O75127 700 aaKnown RBP9.51□□□□□ -0.89
THUMPD2-203ENST00000460072 RNF123Q5XPI4 1314 aa9.5□□□□□ -0.89
THUMPD2-203ENST00000460072 GNAT3A8MTJ3 354 aa9.5□□□□□ -0.89
THUMPD2-203ENST00000460072 SRGNP10124 158 aa9.5□□□□□ -0.89
THUMPD2-203ENST00000460072 CC2D2BQ6DHV5 1058 aa9.5□□□□□ -0.89
THUMPD2-203ENST00000460072 DPY19L2Q6NUT2 758 aa9.5□□□□□ -0.89
THUMPD2-203ENST00000460072 ERBB4Q15303 1308 aa9.5□□□□□ -0.89
THUMPD2-203ENST00000460072 PSMD1Q99460 953 aa9.5□□□□□ -0.89
THUMPD2-203ENST00000460072 HSPA1AP0DMV8 641 aaKnown RBP9.49□□□□□ -0.89
THUMPD2-203ENST00000460072 HSPA1BP0DMV9 641 aaKnown RBP9.49□□□□□ -0.89
THUMPD2-203ENST00000460072 NPR1P16066 1061 aa9.49□□□□□ -0.89
THUMPD2-203ENST00000460072 ST5P78524 1137 aa9.49□□□□□ -0.89
THUMPD2-203ENST00000460072 FKBP4Q02790 459 aaKnown RBP eCLIP9.49□□□□□ -0.89
THUMPD2-203ENST00000460072 TBC1D9BQ66K14 1250 aa9.49□□□□□ -0.89
THUMPD2-203ENST00000460072 TAOK3Q9H2K8 898 aa9.49□□□□□ -0.89
THUMPD2-203ENST00000460072 RASSF10A6NK89 507 aa9.49□□□□□ -0.89
THUMPD2-203ENST00000460072 CRY2Q49AN0 593 aa9.49□□□□□ -0.89
THUMPD2-203ENST00000460072 CCDC93Q567U6 631 aa9.49□□□□□ -0.89
THUMPD2-203ENST00000460072 TTC5Q8N0Z6 440 aa9.49□□□□□ -0.89
THUMPD2-203ENST00000460072 CDHR2Q9BYE9 1310 aa9.49□□□□□ -0.89
THUMPD2-203ENST00000460072 COL13A1Q5TAT6 717 aaPredicted RBP9.48□□□□□ -0.89
THUMPD2-203ENST00000460072 IL17REQ8NFR9 667 aa9.48□□□□□ -0.89
THUMPD2-203ENST00000460072 RSPH6AQ9H0K4 717 aa9.48□□□□□ -0.89
THUMPD2-203ENST00000460072 ZNF652Q9Y2D9 606 aa9.48□□□□□ -0.89
THUMPD2-203ENST00000460072 COL4A5P29400 1685 aa9.48□□□□□ -0.89
THUMPD2-203ENST00000460072 FZD9O00144 591 aa9.48□□□□□ -0.89
THUMPD2-203ENST00000460072 RTKN2Q8IZC4 609 aa9.48□□□□□ -0.89
THUMPD2-203ENST00000460072 TNS4Q8IZW8 715 aa9.48□□□□□ -0.89
THUMPD2-203ENST00000460072 ERVV-1B6SEH8 477 aa9.47□□□□□ -0.89
THUMPD2-203ENST00000460072 CNBD1Q8NA66 436 aa9.47□□□□□ -0.89
THUMPD2-203ENST00000460072 ZNF496Q96IT1 587 aaPredicted RBP9.47□□□□□ -0.89
THUMPD2-203ENST00000460072 HHIPL1Q96JK4 782 aa9.47□□□□□ -0.89
THUMPD2-203ENST00000460072 RBBP6Q7Z6E9 1792 aaKnown RBP9.47□□□□□ -0.89
THUMPD2-203ENST00000460072 HOXA10P31260 410 aaPredicted RBP9.47□□□□□ -0.89
THUMPD2-203ENST00000460072 PRPF40BQ6NWY9 871 aaKnown RBP9.46□□□□□ -0.89
THUMPD2-203ENST00000460072 TAF1DQ9H5J8 278 aaPredicted RBP9.46□□□□□ -0.89
THUMPD2-203ENST00000460072 ITGBL1O95965 494 aaPredicted RBP9.46□□□□□ -0.9
THUMPD2-203ENST00000460072 PNMA8AQ86V59 439 aaPredicted RBP9.46□□□□□ -0.9
THUMPD2-203ENST00000460072 BABAM1Q9NWV8 329 aa9.46□□□□□ -0.9
THUMPD2-203ENST00000460072 TAF1P21675 1872 aa9.46□□□□□ -0.9
THUMPD2-203ENST00000460072 CTCFP49711 727 aaPredicted RBP9.45□□□□□ -0.9
THUMPD2-203ENST00000460072 SLC39A6Q13433 755 aa9.45□□□□□ -0.9
THUMPD2-203ENST00000460072 PNISRQ8TF01 805 aaKnown RBP9.45□□□□□ -0.9
THUMPD2-203ENST00000460072 SETDB2Q96T68 719 aa9.45□□□□□ -0.9
THUMPD2-203ENST00000460072 TNNT2P45379 298 aaPredicted RBP9.45□□□□□ -0.9
THUMPD2-203ENST00000460072 TEFQ10587 303 aa9.45□□□□□ -0.9
THUMPD2-203ENST00000460072 SNRPA1P09661 255 aaKnown RBP9.45□□□□□ -0.9
THUMPD2-203ENST00000460072 RGS19P49795 217 aa9.45□□□□□ -0.9
THUMPD2-203ENST00000460072 RTN4Q9NQC3 1192 aaKnown RBP9.45□□□□□ -0.9
THUMPD2-203ENST00000460072 TMEM88BA6NKF7 163 aa9.44□□□□□ -0.9
THUMPD2-203ENST00000460072 ALDH1B1P30837 517 aa9.44□□□□□ -0.9
THUMPD2-203ENST00000460072 ERFEQ4G0M1 354 aa9.44□□□□□ -0.9
THUMPD2-203ENST00000460072 GPC2Q8N158 579 aa9.44□□□□□ -0.9
THUMPD2-203ENST00000460072 NYXQ9GZU5 481 aa9.44□□□□□ -0.9
THUMPD2-203ENST00000460072 WBP1LQ9NX94 342 aa9.44□□□□□ -0.9
THUMPD2-203ENST00000460072 ECM29Q5VYK3 1845 aa9.43□□□□□ -0.9
THUMPD2-203ENST00000460072 SLC34A2O95436 690 aa9.43□□□□□ -0.9
THUMPD2-203ENST00000460072 DZIP3Q86Y13 1208 aaKnown RBP9.43□□□□□ -0.9
THUMPD2-203ENST00000460072 CRAMP1Q96RY5 1269 aa9.43□□□□□ -0.9
THUMPD2-203ENST00000460072 PGAP2Q9UHJ9 254 aa9.43□□□□□ -0.9
THUMPD2-203ENST00000460072 HACL1Q9UJ83 578 aa9.43□□□□□ -0.9
THUMPD2-203ENST00000460072 WWC3Q9ULE0 1092 aa9.43□□□□□ -0.9
THUMPD2-203ENST00000460072 RTFDC1Q9BY42 306 aaPredicted RBP9.43□□□□□ -0.9
THUMPD2-203ENST00000460072 A0A1B0GUL6 1792 aa9.43□□□□□ -0.9
THUMPD2-203ENST00000460072 CANXP27824 592 aaKnown RBP9.42□□□□□ -0.9
THUMPD2-203ENST00000460072 C21orf2O43822 256 aa9.42□□□□□ -0.9
THUMPD2-203ENST00000460072 IARSP41252 1262 aaKnown RBP9.42□□□□□ -0.9
THUMPD2-203ENST00000460072 CFAP53Q96M91 514 aa9.42□□□□□ -0.9
THUMPD2-203ENST00000460072 ZNF541Q9H0D2 1346 aa9.41□□□□□ -0.9
THUMPD2-203ENST00000460072 BTBD11A6QL63 1104 aa9.41□□□□□ -0.9
THUMPD2-203ENST00000460072 HMOX1P09601 288 aa9.41□□□□□ -0.9
THUMPD2-203ENST00000460072 SLC10A5Q5PT55 438 aa9.41□□□□□ -0.9
THUMPD2-203ENST00000460072 USP50Q70EL3 339 aaPredicted RBP9.41□□□□□ -0.9
THUMPD2-203ENST00000460072 MYH3P11055 1940 aa9.41□□□□□ -0.9
THUMPD2-203ENST00000460072 HSPA8P11142 646 aaKnown RBP9.41□□□□□ -0.9
THUMPD2-203ENST00000460072 TPTE2Q6XPS3 522 aa9.41□□□□□ -0.9
THUMPD2-203ENST00000460072 PAPPA2Q9BXP8 1791 aa9.41□□□□□ -0.9
THUMPD2-203ENST00000460072 AKAP11Q9UKA4 1901 aa9.41□□□□□ -0.9
THUMPD2-203ENST00000460072 ABCC12Q96J65 1359 aa9.41□□□□□ -0.9
THUMPD2-203ENST00000460072 CA12O43570 354 aa9.4□□□□□ -0.9
THUMPD2-203ENST00000460072 MAP2K1Q02750 393 aaPredicted RBP9.4□□□□□ -0.9
THUMPD2-203ENST00000460072 MAP3K15Q6ZN16 1313 aa9.4□□□□□ -0.9
THUMPD2-203ENST00000460072 FOXN1O15353 648 aa9.4□□□□□ -0.9
THUMPD2-203ENST00000460072 HTRA3P83110 453 aa9.4□□□□□ -0.9
THUMPD2-203ENST00000460072 TMC4Q7Z404 712 aa9.4□□□□□ -0.9
THUMPD2-203ENST00000460072 ZNF622Q969S3 477 aaKnown RBP eCLIP9.4□□□□□ -0.93e-9■■□□□ 12.8
THUMPD2-203ENST00000460072 NUDCQ9Y266 331 aa9.4□□□□□ -0.9
THUMPD2-203ENST00000460072 COL4A1P02462 1669 aa9.4□□□□□ -0.91
THUMPD2-203ENST00000460072 NBPF26B4DH59 902 aa9.4□□□□□ -0.91
THUMPD2-203ENST00000460072 EPHX2P34913 555 aa9.4□□□□□ -0.91
THUMPD2-203ENST00000460072 NBPF10Q6P3W6 841 aaKnown RBP9.4□□□□□ -0.91
THUMPD2-203ENST00000460072 NBPF15Q8N660 670 aa9.4□□□□□ -0.91
THUMPD2-203ENST00000460072 ARAP2Q8WZ64 1704 aa9.39□□□□□ -0.91
THUMPD2-203ENST00000460072 NBPF5PQ86XG9 351 aaPredicted RBP9.39□□□□□ -0.91
THUMPD2-203ENST00000460072 ZNF34Q8IZ26 560 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms