RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 ANKRD1Q15327 319 aa11.51□□□□□ -0.57
UFD1-205ENST00000459854 LRRCC1Q9C099 1032 aa11.51□□□□□ -0.57
UFD1-205ENST00000459854 ZNHIT6Q9NWK9 470 aaKnown RBP11.51□□□□□ -0.57
UFD1-205ENST00000459854 FAM83GA6ND36 823 aa11.51□□□□□ -0.57
UFD1-205ENST00000459854 NAP1L1P55209 391 aaKnown RBP11.51□□□□□ -0.57
UFD1-205ENST00000459854 THRAP3Q9Y2W1 955 aaKnown RBP11.51□□□□□ -0.57
UFD1-205ENST00000459854 IFIT2P09913 472 aaKnown RBP11.5□□□□□ -0.57
UFD1-205ENST00000459854 KIF18AQ8NI77 898 aa11.5□□□□□ -0.57
UFD1-205ENST00000459854 TSPYL4Q9UJ04 414 aa11.5□□□□□ -0.57
UFD1-205ENST00000459854 NALCNQ8IZF0 1738 aa11.5□□□□□ -0.57
UFD1-205ENST00000459854 ZSCAN12O43309 604 aa11.5□□□□□ -0.57
UFD1-205ENST00000459854 IL13P35225 146 aa11.5□□□□□ -0.57
UFD1-205ENST00000459854 ERBB3P21860 1342 aa11.49□□□□□ -0.57
UFD1-205ENST00000459854 SMTNL1A8MU46 457 aa11.49□□□□□ -0.57
UFD1-205ENST00000459854 TUBB4AP04350 444 aa11.49□□□□□ -0.57
UFD1-205ENST00000459854 BMS1Q14692 1282 aaKnown RBP11.49□□□□□ -0.57
UFD1-205ENST00000459854 FAM98CQ17RN3 349 aaKnown RBP11.49□□□□□ -0.57
UFD1-205ENST00000459854 UVSSAQ2YD98 709 aa11.49□□□□□ -0.57
UFD1-205ENST00000459854 LARP1Q6PKG0 1096 aaKnown RBP11.49□□□□□ -0.57
UFD1-205ENST00000459854 TMOD3Q9NYL9 352 aa11.49□□□□□ -0.57
UFD1-205ENST00000459854 SETD1AO15047 1707 aaKnown RBP11.49□□□□□ -0.57
UFD1-205ENST00000459854 PCDH11XQ9BZA7 1347 aa11.49□□□□□ -0.57
UFD1-205ENST00000459854 PCDH11YQ9BZA8 1340 aa11.49□□□□□ -0.57
UFD1-205ENST00000459854 GOLGA6L10A0A0M3HER8 536 aa11.49□□□□□ -0.57
UFD1-205ENST00000459854 DHX16O60231 1041 aaKnown RBP11.49□□□□□ -0.57
UFD1-205ENST00000459854 IVLP07476 585 aa11.49□□□□□ -0.57
UFD1-205ENST00000459854 LTBP4Q8N2S1 1624 aa11.49□□□□□ -0.57
UFD1-205ENST00000459854 XBP1P17861 261 aa11.49□□□□□ -0.57
UFD1-205ENST00000459854 KRT85P78386 507 aa11.49□□□□□ -0.57
UFD1-205ENST00000459854 IRX3P78415 501 aaPredicted RBP11.49□□□□□ -0.57
UFD1-205ENST00000459854 HS1BP3Q53T59 392 aa11.49□□□□□ -0.57
UFD1-205ENST00000459854 PPFIBP1Q86W92 1011 aa11.49□□□□□ -0.57
UFD1-205ENST00000459854 TNMDQ9H2S6 317 aa11.49□□□□□ -0.57
UFD1-205ENST00000459854 BRMS1Q9HCU9 246 aa11.49□□□□□ -0.57
UFD1-205ENST00000459854 OVOS2A0A0J9YW53 1432 aa11.49□□□□□ -0.57
UFD1-205ENST00000459854 OVOS2Q6IE36 1432 aa11.49□□□□□ -0.57
UFD1-205ENST00000459854 CHMP3Q9Y3E7 222 aa11.48□□□□□ -0.57
UFD1-205ENST00000459854 SMAP1Q8IYB5 467 aaPredicted RBP11.48□□□□□ -0.57
UFD1-205ENST00000459854 CEP57L1Q8IYX8 460 aa11.48□□□□□ -0.57
UFD1-205ENST00000459854 PAXBP1Q9Y5B6 917 aa11.48□□□□□ -0.57
UFD1-205ENST00000459854 ZSCAN31Q96LW9 406 aaPredicted RBP11.48□□□□□ -0.57
UFD1-205ENST00000459854 TMPOP42166 694 aaKnown RBP11.48□□□□□ -0.57
UFD1-205ENST00000459854 PTPN14Q15678 1187 aa11.48□□□□□ -0.57
UFD1-205ENST00000459854 NBPF6Q5VWK0 638 aa11.48□□□□□ -0.57
UFD1-205ENST00000459854 CNTROBQ8N137 903 aa11.48□□□□□ -0.57
UFD1-205ENST00000459854 NBPF4Q96M43 638 aa11.48□□□□□ -0.57
UFD1-205ENST00000459854 CPDO75976 1380 aa11.47□□□□□ -0.57
UFD1-205ENST00000459854 TOMM22Q9NS69 142 aa11.47□□□□□ -0.57
UFD1-205ENST00000459854 CDK12Q9NYV4 1490 aaPredicted RBP11.47□□□□□ -0.57
UFD1-205ENST00000459854 ERICH4A6NGS2 130 aa11.47□□□□□ -0.57
UFD1-205ENST00000459854 OFD1O75665 1012 aa11.47□□□□□ -0.57
UFD1-205ENST00000459854 CBX1P83916 185 aa11.47□□□□□ -0.57
UFD1-205ENST00000459854 AKAP4Q5JQC9 854 aa11.47□□□□□ -0.57
UFD1-205ENST00000459854 LNPKQ9C0E8 428 aa11.47□□□□□ -0.57
UFD1-205ENST00000459854 PDZRN3Q9UPQ7 1066 aa11.47□□□□□ -0.57
UFD1-205ENST00000459854 RBM6P78332 1123 aaKnown RBP11.47□□□□□ -0.57
UFD1-205ENST00000459854 CRACR2AQ9BSW2 395 aa11.47□□□□□ -0.57
UFD1-205ENST00000459854 MAGEC2Q9UBF1 373 aaPredicted RBP11.47□□□□□ -0.57
UFD1-205ENST00000459854 ZNF330Q9Y3S2 320 aaPredicted RBP11.47□□□□□ -0.57
UFD1-205ENST00000459854 CAVIN2O95810 425 aa11.46□□□□□ -0.57
UFD1-205ENST00000459854 PLCD4Q9BRC7 762 aa11.46□□□□□ -0.57
UFD1-205ENST00000459854 NOL10Q9BSC4 688 aaKnown RBP11.46□□□□□ -0.57
UFD1-205ENST00000459854 GOLGA6L9A6NEM1 432 aa11.46□□□□□ -0.58
UFD1-205ENST00000459854 CCDC148Q8NFR7 591 aa11.46□□□□□ -0.58
UFD1-205ENST00000459854 CCDC102AQ96A19 550 aa11.46□□□□□ -0.58
UFD1-205ENST00000459854 GTF2A1P52655 376 aaPredicted RBP11.46□□□□□ -0.58
UFD1-205ENST00000459854 CCDC181Q5TID7 509 aa11.46□□□□□ -0.58
UFD1-205ENST00000459854 LUZP1Q86V48 1076 aa11.46□□□□□ -0.58
UFD1-205ENST00000459854 ERICH2A1L162 156 aa11.45□□□□□ -0.58
UFD1-205ENST00000459854 MSH5O43196 834 aa11.45□□□□□ -0.58
UFD1-205ENST00000459854 NEK4P51957 841 aa11.45□□□□□ -0.58
UFD1-205ENST00000459854 VPS72Q15906 364 aa11.45□□□□□ -0.58
UFD1-205ENST00000459854 KRT222Q8N1A0 295 aa11.45□□□□□ -0.58
UFD1-205ENST00000459854 RBM42Q9BTD8 480 aaKnown RBP11.45□□□□□ -0.58
UFD1-205ENST00000459854 SERPINC1P01008 464 aa11.45□□□□□ -0.58
UFD1-205ENST00000459854 SPC24Q8NBT2 197 aa11.45□□□□□ -0.58
UFD1-205ENST00000459854 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.45□□□□□ -0.58
UFD1-205ENST00000459854 CFAP45Q9UL16 551 aa11.45□□□□□ -0.58
UFD1-205ENST00000459854 WDR63Q8IWG1 891 aa11.45□□□□□ -0.58
UFD1-205ENST00000459854 AMOTL1Q8IY63 956 aa11.45□□□□□ -0.58
UFD1-205ENST00000459854 BBXQ8WY36 941 aaPredicted RBP11.45□□□□□ -0.58
UFD1-205ENST00000459854 TUBB4BP68371 445 aa11.45□□□□□ -0.58
UFD1-205ENST00000459854 DCAF5Q96JK2 942 aa11.45□□□□□ -0.58
UFD1-205ENST00000459854 BCL2L13Q9BXK5 485 aa11.45□□□□□ -0.58
UFD1-205ENST00000459854 NUP62CLQ9H1M0 184 aa11.45□□□□□ -0.58
UFD1-205ENST00000459854 CD163L1Q9NR16 1453 aa11.44□□□□□ -0.58
UFD1-205ENST00000459854 BTBD11A6QL63 1104 aa11.44□□□□□ -0.58
UFD1-205ENST00000459854 MPRIPQ6WCQ1 1025 aa11.44□□□□□ -0.58
UFD1-205ENST00000459854 KIF20AO95235 890 aa11.44□□□□□ -0.58
UFD1-205ENST00000459854 EZRP15311 586 aaKnown RBP11.44□□□□□ -0.58
UFD1-205ENST00000459854 CT47A1Q5JQC4 288 aaPredicted RBP11.44□□□□□ -0.58
UFD1-205ENST00000459854 CCDC83Q8IWF9 413 aa11.44□□□□□ -0.58
UFD1-205ENST00000459854 ROBO1Q9Y6N7 1651 aa11.44□□□□□ -0.58
UFD1-205ENST00000459854 USP32Q8NFA0 1604 aa11.44□□□□□ -0.58
UFD1-205ENST00000459854 GSDMDP57764 484 aa11.44□□□□□ -0.58
UFD1-205ENST00000459854 G3BP1Q13283 466 aaKnown RBP eCLIP11.44□□□□□ -0.58
UFD1-205ENST00000459854 CCDC184Q52MB2 194 aa11.44□□□□□ -0.58
UFD1-205ENST00000459854 SMARCC1Q92922 1105 aaPredicted RBP11.44□□□□□ -0.58
UFD1-205ENST00000459854 GJD4Q96KN9 370 aaPredicted RBP11.44□□□□□ -0.58
UFD1-205ENST00000459854 PXDNQ92626 1479 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms